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Taxonomy browser (Pan troglodytes)

Pan troglodytes

Taxonomy ID: 9598
Genbank common name: chimpanzee
Inherited blast name: primates
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Lineage( full )
cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan
   Entrez records   
Database name Subtree links Direct links
Nucleotide 948,813 717,380
Nucleotide EST 17,130 5,065
Nucleotide GSS 197,581 197,581
Protein 56,466 55,081
Structure 10 10
Genome Sequences 27 26
Genome Projects 1 1
Popset 20,693 20,688
SNP 1,508,902 1,508,902
3D Domains 14 14
GEO Datasets 25 25
GEO Expressions 12,651 12,651
UniSTS 278,953 278,953
PubMed Central 1,480 1,360
Gene 32,288 32,288
HomoloGene 16,375 16,375
OMIA 2 2
Taxonomy 5 1

Genome Information

Go to NCBI genomic BLAST page for Pan troglodytes
Genome view: 25 chromosomes
Names 1 2A 2B 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 X Y
See the TRACE Assembly
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
454 CLONEEND FINISHING PCR PRIMERWALK SHOTGUN WGS ALL
GBF - German Research Centre for Biotechnology
- - - - - 75,946 - 75,946
IMBGA - Institute of Molecular Biotechnology Genome Analysis
- - - - - 260,106 - 260,106
NISC - NIH Intramural Sequencing Center
- - - - - 734,808 - 734,808
UOKNOR - University of Oklahoma Norman Campus, Advanced Center for Genome Technology
- - 592 - - 138,696 - 139,288
UWGL
- - - 1,056 - - - 1,056
WIBR - Whitehead Institute for Biomedical Research/MIT
- - - - - - 13,288,075 13,288,075
WUGSC - Washington University, Genome Sequencing Center
844,498 3,631,970 21,830 22,114 407,622 10,280,065 18,051,216 33,259,315
Totals per type
844,498 3,631,970 22,422 23,170 407,622 11,489,621 31,339,291 47,758,594

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pan troglodytes taxonomy/phylogenetic Animal Diversity Web
Pan troglodytes taxonomy taxonomy/phylogenetic Arctos Specimen Database
DNA barcoding : Pan troglodytes taxonomy/phylogenetic Barcodes of Life
Pan troglodytes taxonomy/phylogenetic Catalog of Life
CCR culture/stock collections Coriell Cell Repositories
Pan troglodytes (Blumenbach, 1775) taxonomy/phylogenetic Encyclopedia of life
chimpanzee taxonomy/phylogenetic ICTV checklist
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Pan troglodytes (Blumenbach, 1775) taxonomy/phylogenetic Integrated Taxonomic Information System
Pan troglodytes taxonomy/phylogenetic Mammal Species of the World
NCBI Mitochondria NCBI Mitochondrial Genomes
chimpanzee #1 (genome proposal) taxonomy/phylogenetic NHGRI genome proposal white papers
chimpanzee #2 (genome proposal) taxonomy/phylogenetic
chimpanzee (BAC proposal) taxonomy/phylogenetic
Pan troglodytes (chimpanzee) taxonomy/phylogenetic Primate Fact Sheets
Pan troglodytes taxonomy/phylogenetic TreeBase
UCSCgb sequence screening/similarity/alignment UCSC Genome Browser
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.
To see LinkOut links in this lineage click here

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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