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Taxonomy browser (Amycolatopsis rubida)

Amycolatopsis rubida

Taxonomy ID: 112413 (for references in articles please use NCBI:txid112413)
current name
Amycolatopsis rubida Huang et al. 2001
type strain of Amycolatopsis rubida: CGMCC:4.1541, CIP:107102, DSM:44637, JCM:10871, NBRC:100041, NRRL:B-24150, personal::13.4
homotypic synonym:
Amycolatopsis rubida Huang et al. 2001 emend. Nouioui et al. 2018, emended name 1) in [Nouioui I et al. (2018c)]
includes:
Amycolatopsis sp. 13.4
NCBI BLAST name: high G+C Gram-positive bacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Terrabacteria group; Actinomycetota; Actinomycetes; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis
   Entrez records   
Database name Direct links Links from type
Nucleotide 555 97
Protein 19,258 -
Genome 1 -
Popset 3 -
PubMed Central 6 -
Gene 9,423 -
Identical Protein Groups 17,597 -
BioProject 5 -
BioSample 4 2
Assembly 3 1
Taxonomy 1 -

Notes:

Comments and References:
Nouioui I et al. (2018c), doi: 10.3389/fmicb.2018.02007, PubMed: abstract
Nouioui, I., Carro, L., García-López, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Göker M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.
Huang Y et al. (2001)
Huang, Y. Qi, W., Lu, Z., Liu, Z., and Goodfellow, M. " Amycolatopsis rubida sp. nov., a new Amycolatopsis species from soil." Int. J. Syst. Evol. Microbiol. (2001) 51:1093-1097.
Nouioui I et al. (2018c)
Nouioui, I., Carro, L., GarcIa-Lopez, M., Meier-Kolthoff, J.P., Woyke, T., Kyrpides, N.C., Pukall, R., Klenk, H.-P., Goodfellow, M., and Goker, M. "Genome-based taxonomic classification of the phylum Actinobacteria." Front. Microbiol. (2018) 9:2007.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Amycolatopsis rubida meta-databases BacDive
2 records from this provider organism-specific BioCyc
Amycolatopsis rubida Huang et al. 2001 taxonomy/phylogenetic Encyclopedia of life
GOLD: Go0027819 organism-specific Genomes On Line Database
Amycolatopsis rubida culture/stock collections Global Catalogue of Microorganisms
2675903692: Amycolatopsis rubida DSM 44637 organism-specific Integrated Microbial Genomes
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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