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Taxonomy browser (Pseudomonas ficuserectae)

Pseudomonas ficuserectae

Taxonomy ID: 53410 (for references in articles please use NCBI:txid53410)
current name
Pseudomonas ficuserectae Goto 1983
type strain of Pseudomonas ficuserectae: ATCC:35104, CCUG:32779, CFBP:3224, JCM:2400, BCCM/LMG:5694, ICMP:7848, personal::L7
NCBI BLAST name: g-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 2
   Entrez records   
Database name Direct links Links from type
Nucleotide 2,941 1,262
Protein 21,429 -
Genome 1 -
Popset 9 -
PubMed Central 15 -
Protein Clusters 91 -
Identical Protein Groups 13,375 -
BioProject 2 -
BioSample 5 1
Assembly 4 -
Taxonomy 1 -

Comments and References:

P. ficuserectae = P. amygdali = P. meliae = P. savastanoi
From the LPSN web site: "Pseudomonas ficuserectae Goto 1983, Pseudomonas amygdali Psallidas and Panagopoulos 1975 (Approved Lists 1980), Pseudomonas meliae Ogimi 1981, and Pseudomonas savastanoi (Janse 1982) Gardan et al. 1992 are members of a single genomospecies. Thus, these species should be considered synonymous and the correct name for this species should be Pseudomonas amygdali. Unfortunately, Pseudomonas amygdali, as delineated by DNA-DNA hybridization, could not be differentiated from other genomospecies by phenotypic tests. So the authors [Gardan et al. 1999] do not formally propose nomenclatural changes." [N.B.: See also Gomila M et al. (2017).]
Gardan L et al. (1999)
Gardan, L., Shafik, H., Belouin, S., Broch, R., Grimont, F., and Grimont, P.A.D. "DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)." Int. J. Syst. Bacteriol. (1999) 49:469-478. [N.B.: Gardan et al. claim strains CFBP 1660 (pathotype of P. syringae pv. primulae) and CFBP 2348 (pathotype of P. syringae pv. ribicola) are misidentified and should be transferred to Pseudomonas viridiflava.]
Gomila M et al. (2017b), other link:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5725466/
Gomila, M., Busquets, A., Mulet, M., García-Valdés, E., and Lalucat, J. "Clarification of taxonomic status within the Pseudomonas syringae species group based on a phylogenomic analysis." Front. Microbiol. (2017) 8:2422.
Goto M (1983b)
Goto, M. "Pseudomonas ficuserectae sp. nov., the causal agent of bacterial leaf spot of Ficus erecta Thunb." Int. J. Syst. Bacteriol. (1983) 33:546-550. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Pseudomonas ficuserectae meta-databases BacDive
Pseudomonas ficuserectae Goto 1983 taxonomy/phylogenetic Encyclopedia of life
GOLD Multi-Isolate Organism: Go0141203 organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Pseudomonas ficuserectae culture/stock collections Global Catalogue of Microorganisms
4 records from this provider organism-specific Integrated Microbial Genomes
Pseudomonas ficuserectae taxonomy/phylogenetic Lifemap
Wikipedia taxonomy/phylogenetic iPhylo
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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