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Taxonomy browser (Chytridiomycota)

Chytridiomycota

Taxonomy ID: 4761
Inherited blast name: chytrids
Rank: phylum
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Other names:
synonym: Monoblepharidomycota
synonym: Mastigomycotina
blast name: chytrids
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi
   Entrez records   
Database name Subtree links Direct links
Nucleotide 22,319 -
Nucleotide EST 3,991 -
Nucleotide GSS 39 -
Protein 60,428 -
Genome 10 -
Popset 172 97
SNP 280 -
GEO Datasets 14 -
PubMed Central 1,229 438
Gene 18,082 -
SRA Experiments 129 -
Assembly 7 -
Bio Project 31 -
Bio Sample 115 -
Taxonomy 693 1

Comments and References:

Chytridiomycota
Classification based on Barr, DJS. 2001. 'Chytridiomycota' In McLaughlin, McLaughlin & Lemke (Eds.), The Mycota VII Systematics and Evolution Part A, Springer-Verlag, Berlin, pp. 93-112.

Reference to PubMed documentHibbett et al. (2007)
Hibbett DS, Binder M, Bischoff JF, Blackwell M, Cannon PF, Eriksson OE Huhndorg S, James T, Kirk PM, Lucking R, Lumbsch T, Lutzoni F, Matheny PB, McLaughlin D, Powell MJ, Redhead S, Schoch CL, Spatafora JW, Stalpers JA, Vilgalys R, Aime CA, Aptroot A, Bauer R, Begerow D, Benny GL, Castlebury LA, Crous PW, Dai Y-C, Gams W, Geiser DM, Griffith GW, Gueidan C, Hawksworth DL, Hestmark G, Hosaka K, Humber RA, Hyde K, Ironside JE, Koljalg U, Kurtzman CP, Larrson K-H, Lichtwardt R, Longcore J, Mia Klikowska J, Miller A, Moncalvo J-M, Mozley-Standridge S, Oberwinkler F, Parmasto E, Reeb V, Rodgers JD, Roux C, Ryvarden L, Sampaio JP< Schussler A, Sugiyama J, Thorn RG, Tibell L, Untereiner WA, Walker C, Wang Z, Weir A, Weiss M, White MM, Winka K, Yao Y-J, Zhang N. 2007. A higher-level phylogenetic classification of the Fungi. Mycological Research 111: 509-547.

Reference to PubMed documentSeif et al. (2005)
Seif E, Leigh L, Roewer I, Forget L, Lang BF, 2005. Comparative mitochondrial genomics in zygomycetes: bacteria-like RNase P RNAs, mobile elements and a close source of the group I intron invasion in angiosperms. Nucleic Acids Research 33: 734-744.

Reference to PubMed documentJames et al. (2007)
James TY, Letcher PM, Longcore JE, Mozley-Standridge SE, Porter D, Powell MJ, Griffith GW, Vilgalys R. 2007. A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota). Mycologia. 2006 98 :860-871.

Liu Y et al. 2006
Liu, Y., M. C. Hodson, and B. D. Hall. 2006. Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of kingdom Fungi inferred from RNA polymerase II subunit genes. BMC Evolutionary Biology 6:74.

James TY et al. 2006
James, T. Y., F. Kauff, C. Schoch, P. B. Matheny, V. Hofstetter, C. Cox, G. Celio, C. Gueidan, E. Fraker, J. Miadlikowska, H. T. Lumbsch, A. Rauhut, V. Reeb, A. E. Arnold, A. Amtoft, J. E. Stajich, K. Hosaka, G.-H. Sung, D. Johnson, B. O*Rourke, M. Crockett, M. Binder, J. M. Curtis, J. C. Slot, Z. Wang, A. W. Wilson, A. Schu*ler, J. E. Longcore, K. O*Donnell, S. Mozley-Standridge, D. Porter, P. M. Letcher, M. J. Powell, J. W. Taylor, M. M. White, G. W. Griffith, D. R. Davies, R. A. Humber, J. B. Morton, J. Sugiyama, A. Y. Rossman, J. D. Rogers, D. H. Pfister, D. Hewitt, K. Hansen, S. Hambleton, R. A. Shoemaker, J. Kohlmeyer, B. Volkmann-Kohlmeyer, R. A. Spotts, M. Serdani, P. W. Crous, K. W. Hughes, K. Matsuura, E. Langer, G. Langer, W. A. Untereiner, R. Lucking, B. Budel, D. M. Geiser, A. Aptroot, P. Diederich, I. Schmitt, M. Schultz, R. Yahr, D. Hibbett, F Lutzoni, D. McLaughlin, J. Spatafora, and R. Vilgalys. 2006a. Reconstructing the early evolution of the fungi using a six gene phylogeny. Nature 443: 818-822.


External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Chytridiomycetes taxonomy/phylogenetic Encyclopedia of life
Chytridiomycota Arx taxonomy/phylogenetic MycoBank
Chytridiomycota M.J. Powell taxonomy/phylogenetic
Chytridiomycota sp. (taxon passport) culture/stock collections StrainInfo
Chytridiomycetes taxonomy/phylogenetic TreeBase
Chytridiomycota taxonomy/phylogenetic
Chytridiomycota taxonomy/phylogenetic World Register of Marine Species
Wikipedia taxonomy/phylogenetic iPhylo
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