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Taxonomy browser (Methanosarcina barkeri)

Methanosarcina barkeri

Taxonomy ID: 2208 (for references in articles please use NCBI:txid2208)
current name
Methanosarcina barkeri Schnellen 1947 (Approved Lists 1980) emend. Maestrojun et al. 1992, nom. approb. 1)
type strain of Methanosarcina barkeri: ATCC:43569, DSM:800, JCM:10043, NBRC:100474, OCM:38, VKM:B-1635, personal::MS
homotypic synonym:
"Sarcina barkeri" Breed and Smit 1957, effective name 2)
Methanosarcina barkeri Schnellen 1947 (Approved Lists 1980) emend. Bryant and Boone 1987, nom. approb. 3)
NCBI BLAST name: euryarchaeotes
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
"Methanosarcina barkerii" (sic) Schnellen 1947, effective name 4)
Lineage( full )
cellular organisms; Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 1,264 546 508
Protein 32,165 13,138 -
Structure 41 11 -
Genome 1 1 -
Popset 5 5 -
GEO Datasets 98 14 -
PubMed Central 1,644 1,644 -
Gene 27,264 1 -
SRA Experiments 198 113 -
Protein Clusters 2,300 2,300 -
Identical Protein Groups 20,676 14,118 -
BioProject 23 10 -
BioSample 245 152 59
Assembly 8 2 2
PubChem BioAssay 4 4 -
Taxonomy 8 1 -

Notes:

Comments and References:

image:Methanosarcina barkeri
Bryant MP & Boone DR (1987)
Bryant, M.P., and Boone, D.R. "Emended description of strain MST (DSM 800T), the type strain of Methanosarcina barkeri." Int. J. Syst. Bacteriol. (1987) 37:169-170. [No PubMed record available.]
JUDICIAL OPINION 63 (1986)
JUDICIAL OPINION 63: "Rejection of the type species Methanosarcina methanica (Approved Lists, 1980) and conservation of the genus Methanosarcina (Approved Lists, 1980) emend. Mah and Kuhn 1984 with Methanosarcina barkeri (Approved Lists, 1980) as the type species." Int. J. Syst. Bacteriol. (1986) 36:492 [No PubMed record available.]
Krone UE & Thauer RK (1992)
Krone, U.E., and Thauer, R.K. "Dehalogenation of trichlorofluoromethane (CFC-11) by Methanosarcina barkeri." FEMS Microbiol. Lett. (1992) 69:201-204.
Mah RA & Kuhn DA (1984b)
Mah, R.A., and Kuhn, D.A. "Rejection of the type species of Methanosarcina methanica (Approved Lists, 1980), conservation of the genus Methanosarcina with Methanosarcina barkeri (Approved Lists, 1980) as the type species, and emendation of the genus Methanosarcina. Request for an opinion." Int. J. Syst. Bacteriol. (1984) 34:266-267. [No PubMed record available.]
Maestrojuan GM et al. (1992)
Maestrojuan, G.M., Boone, J.E., Mah, R.A., Menaia, J.A.G.F., Sachs, M.S., and Boone, D.R. "Taxonomy and halotolerance of mesophilic Methanosarcina strains, assignment of strains to species, and synonymy of Methanosarcina mazei and Methanosarcina frisia."Int. J. Syst. Bacteriol. (1992) 42:561-567. [No PubMed record available.]
Schnellen CGTP (1947)
Schnellen, C.G.T.P. "Onderzoekingen over de methaangisting." Thesis (1947) Technische Hoogeschool Delft, Drukkerij "De Maasstad," Rotterdam, The Netherlands. [No PubMed record available.]
Skerman VBD et al. (1980)
Skerman, V.B.D., McGowan, V., and Sneath, P.H.A. (editors). "Approved lists of bacterial names." Int. J. Syst. Bacteriol. (1980) 30:225-420. [No PubMed record available.]
Wayne LG (1986)
Wayne, L.G. "Actions of the Judicial Commission of the International Committee on Systematic Bacteriology on requests for opinions published in1983 and 1984." Int. J. Syst. Bacteriol. (1986) 36:357-358. [No PubMed record available.]

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Methanosarcina barkeri meta-databases BacDive
Methanosarcina barkeri Schnellen 1947 (Approved Lists 1980) taxonomy/phylogenetic Encyclopedia of life
Methanosarcina barkeri culture/stock collections Global Catalogue of Microorganisms
Methanosarcina barkeri Schnellen, 1947 taxonomy/phylogenetic Ocean Biogeographic Information System
Methanosarcina barkeri Schnellen, 1947 taxonomy/phylogenetic World Register of Marine Species
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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