Taxonomy browser (Nitrospira)

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Taxonomy browser (Nitrospira)

Nitrospira¹⁾

Taxonomy ID: 1234 (for references in articles please use NCBI:txid1234)

current name

Nitrospira Watson et al. 1986

NCBI BLAST name: bacteria
Rank: genus
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)

Lineage( full ): cellular organisms; Bacteria; Nitrospirota; Nitrospiria; Nitrospirales; Nitrospiraceae

Entrez records
Database name	Subtree links	Direct links
Nucleotide	16,769	-
Protein	256,766	279
Structure	10	-
Genome	13	1
Popset	326	230
Conserved Domains	1	-
GEO Datasets	11	-
PubMed Central	2,650	2,650
Gene	4,321	-
SRA Experiments	593	-
Protein Clusters	1,306	90
Identical Protein Groups	898,538	279
BioProject	79	2
BioSample	1,141	-
Assembly	517	-
Taxonomy	155	1

Notes:

1) Duplicate name. This name, above species rank, is duplicated within the NCBI classification 1) due to its independent use within separate Codes of Nomenclature; 2) its valid duplication at different ranks within a single Code (e.g. genus and subgenus); 3) unresolved lineage placement; or 4) as unresolved homonym within a single Code.

Comments and References:

Nitrospira (LPSN link)

Euzeby JP & Kudo T (2001)

Euzeby, J.P., and Kudo, T. "Corrigenda to the Validation Lists." Int. J. Syst. Evol. Microbiol. (2001) 51(5):1933-1938.

VALIDATION LIST No. 21 (1986)

VALIDATION LIST No. 21. Int. J. Syst. Bacteriol. (1986) 36:489.

VALIDATION LIST No. 22 (1986)

VALIDATION LIST No. 22. Int. J. Syst. Bacteriol. (1986) 36:573-576.

Watson SW et al. (1986)

Watson, S.W., Bock, E., Valois, F.W., Waterbury, J.B., and Schlosser, U. "Nitrospira marina gen. nov., sp. nov.: a chemolithotrophic nitrite-oxidizing bacterium." Arch. Microbiol. (1986) 144:1-7. [No PubMed record available.]

Bayer B et al. (2019)

Bayer, B., Vojvoda, J., Reinthaler, T., Reyes, C., Pinto, M., and Herndl, G.J. "Nitrosopumilus adriaticus sp. nov. and Nitrosopumilus piranensis sp. nov., two ammonia-oxidizing archaea from the Adriatic Sea and members of the class Nitrososphaeria." Int. J. Syst. Evol. Microbiol. (2019) 69:1892-1902.

External Information Resources (NCBI LinkOut)

LinkOut	Subject	LinkOut Provider
Nitrospira	taxonomy/phylogenetic	Encyclopedia of life
GOLD Multi-Isolate Organism: Go0109788	organism-specific	Genomes On Line Database
3 records from this provider	organism-specific	Integrated Microbial Genomes
Nitrospira	taxonomy/phylogenetic	Lifemap
LBSN	taxonomy/phylogenetic	List of Bacterial names with Standing in Nomenclature

Notes:: Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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Nitrospira 1)

Notes:

Comments and References:

External Information Resources (NCBI LinkOut)

Nitrospira¹⁾