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2XJN: 
Crystal structure of Streptococcus suis Dpr with copper
Biological unit 1: dodecameric
Source organism: Streptococcus suis
Number of proteins:
12 (DNA PROTECTION DURING STARVATION PROTEIN ▼)
Protein molecule
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AA -Click to explore this molecule neighborsBB -Click to explore this molecule neighborsCC -Click to explore this molecule neighborsDD -Click to explore this molecule neighborsEE -Click to explore this molecule neighborsFF -Click to explore this molecule neighbors
GG -Click to explore this molecule neighborsHH -Click to explore this molecule neighborsII -Click to explore this molecule neighborsJJ -Click to explore this molecule neighborsKK -Click to explore this molecule neighbors
LL -Click to explore this molecule neighbors
 DNA PROTECTION DURING STARVATION PROTEIN
Number of chemicals:
26 (CALCIUM ION (5),CHLORIDE ION (5),COPPER (II) IO... ▼)
Chemical
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CALCIUM ION (5)
CHLORIDE ION (5)
COPPER (II) ION (12)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID (4)
Similar Structures (244)help
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Showing 1 to 10 out of 244 selected structures help
      PDB ID Description Taxonomy▲▼ Aligned Protein▲▼ RMSD▲▼ Aligned Residues▲▼ Sequence Identity▲▼
1
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 2BW1
Iron-bound crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis
Streptococcus suis
 12 0.19Å 1810 100%
2
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 2V15
Terbium binding in Streptococcus suis Dpr protein
Streptococcus suis
 12 0.20Å 1810 100%
3
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 2XKQ
Crystal structure of Streptococcus suis Dpr with manganese
Streptococcus suis
 12 0.62Å 1809 100%
4
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 2XJO
Crystal structure of Streptococcus suis Dpr with nickel
Streptococcus suis
 12 0.17Å 1808 100%
5
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 1UMN
Crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis
Streptococcus suis
 12 0.39Å 1808 100%
6
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 2XJM
Crystal structure of Streptococcus suis Dpr with cobalt
Streptococcus suis
 12 0.24Å 1807 100%
7
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 2WLA
Streptococcus pyogenes Dpr
Streptococcus pyogenes
 12 0.63Å 1807 62%
8
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 2XGW
ZINC-BOUND CRYSTAL STRUCTURE OF STREPTOCOCCUS PYOGENES DPR
Streptococcus pyogenes
 12 0.62Å 1806 62%
9
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 2WLU
Iron-bound crystal structure of Streptococcus pyogenes Dpr
Streptococcus pyogenes
 12 0.64Å 1806 62%
10
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 2UX1
Identification of two zinc-binding sites in the Streptococcus suis Dpr protein
Streptococcus suis
 12 0.34Å 1805 100%
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Citing VAST
Gibrat JF, Madej T, Bryant SH. "Surprising similarities in structure comparison.", Curr Opin Struct Biol.1996 Jun;6(3):377-85
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. "MMDB and VAST+: tracking structural similarities between macromolecular complexes." Nucl. Acids Res. 2014 Jan;42(Database issue):D297-303
Thomas Madej, Aron Marchler-Bauer, Christopher Lanczycki, Dachuan Zhang, Stephen H Bryant "Biological Assembly Comparison With VAST" Methods Mol. Biol. 2020(2112):175-186
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?Original VAST
Original VAST finds structures that are similar to individual protein molecules, or individual 3D domains, in your query structure. Select a protein molecule ("chain") or 3D domain of interest from the table below to view a list of other proteins or domains that have a similar 3D shape. In contrast to VAST+, which focuses on the default biological unit, Original VAST lists all protein molecules in the asymmetric unit of the query structure.