6FBC: KlenTaq DNA polymerase processing a modified primer - bearing the modification at the 3'-terminus of the primer

PDB ID: 6FBCDownload
MMDB ID: 167028
PDB Deposition Date: 2017/12/19
Updated in MMDB: 2018/10
Experimental Method:
x-ray diffraction
Resolution: 1.54  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6FBC: trimeric; determined by author and by software (PISA)
Molecular Components in 6FBC
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase I, Thermostable
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*gp*ap*cp*cp*ap*cp*gp*gp*cp*cp*ap*(oh3))-3')
Molecule annotation
1
DNA (5'-d(*ap*ap*ap*cp*gp*tp*gp*gp*cp*cp*gp*tp*gp*gp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine
2
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
MANGANESE (II) IONMANGANESE (II) ION
4
2
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303