4NDG: Human Aprataxin (Aptx) bound to RNA-DNA and Zn - adenosine vanadate transition state mimic complex

PDB ID: 4NDGDownload
MMDB ID: 116108
PDB Deposition Date: 2013/10/26
Updated in MMDB: 2013/12
Experimental Method:
x-ray diffraction
Resolution: 2.541  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 4NDG: trimeric; determined by author and by software (PISA)
Molecular Components in 4NDG
Label Count Molecule
Protein (1 molecule)
1
Aprataxin
Molecule annotation
Nucleotide(1 molecule)
1
5'-d(*gp*ap*ap*tp*cp*ap*tp*ap*ap*c)-3'
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
D
1
5'-R(P*G)-D(P*TP*TP*AP*TP*GP*AP*TP*TP*C)-3'
1
1
adenosine-5'-vanadateadenosine-5'-vanadate
2
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303