MMDB Protein Structure Summary, 3Q9B, 88982

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Crystal Structure of Apah Complexed With M344

MMDB ID: 88982PDB ID: 3Q9B

PDB Deposition Date:	2011/1/7
Updated in MMDB:	05/2011 ▼
MMDB Version:
Experimental Method:	X-Ray Diffraction
Resolution:	2.25 Å
Source Organism:	Mycoplana ramosa
Similar Structures:

Citation:

Structure of prokaryotic polyamine deacetylase reveals evolutionary functional relationships with eukaryotic histone deacetylases .

Lombardi PM, Angell HD, Whittington DA, Flynn EF, Rajashankar KR, Christianson DW

Biochemistry (2011) 50 p.1808

Biological Unit: dimeric; determined by author, and by software (PISA)

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Molecules and interactions
Label	Count	Molecule	Interactions
Proteins and interactions (2 molecules)
	2	Acetylpolyamine Amidohydrolase Show annotation ▼	Acetylpolyamine Amidohydrolase Dimethyl Sulfoxide M344 Potassium Ion Sodium Ion Zinc Ion
Chemicals and interactions (31 molecules)
	22	Dimethyl Sulfoxide	Acetylpolyamine Amidohydrolase M344
	2	M344	Acetylpolyamine Amidohydrolase Dimethyl Sulfoxide Zinc Ion
	3	K⁺ (Potassium Ion)	Acetylpolyamine Amidohydrolase
	2	Na⁺ (Sodium Ion)	Acetylpolyamine Amidohydrolase
	2	Zn⁺⁺ (Zinc Ion)	Acetylpolyamine Amidohydrolase M344

* Click molecule labels to explore molecular sequence information.
* The interaction graph may not show all instances of molecules listed in the table.

Citing MMDB

Madej T, Addess KJ, Fong JH, Geer LY, Geer RC, Lanczycki CJ, Liu C, Lu S, Marchler-Bauer A, Panchenko AR, Chen J, Thiessen PA, Wang Y, Zhang D, Bryant SH. "MMDB: 3D structures and macromolecular interactions." Nucleic Acids Res. 2012 Jan; 40(Database issue):D461-4