3OYC: Crystal Structure of the Prototype Foamy Virus (Pfv) Intasome in Complex With Magnesium and the Insti Pica

PDB ID: 3OYCDownload
MMDB ID: 86314
PDB Deposition Date: 2010/9/23
Updated in MMDB: 05/2011 
Experimental Method:
X-Ray Diffraction
Resolution: 2.66  Å
Source Organism:
synthetic construct
Similar Structures:
Biological Unit: octameric; determined by author, and by software (PISA)
Molecules and interactions
Label Count Molecule Interactions
Proteins and interactions (4 molecules)
4
PFV Integrase
Show annotation
  • Ammonium Ion
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • DNA (5'-8 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*t
    p*tp*tp*cp*gp*cp*a)-3')
  • Glycerin
  • Magnesium Ion
  • PFV Integrase
  • Sulfate Ion
  • ZZW
  • Zinc Ion
Nucleotides and interactions (4 molecules)
2
DNA (5'-8 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*t
p*tp*tp*cp*gp*cp*a)-3')
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • PFV Integrase
  • ZZW
2
DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
tp*gp*ap*cp*a)-3')
  • DNA (5'-8 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*t
    p*tp*tp*cp*gp*cp*a)-3')
  • Magnesium Ion
  • PFV Integrase
  • ZZW
Chemicals and interactions (22 molecules)
 -Click for PubChem compound information. 2
  • PFV Integrase
 -Click for PubChem compound information. 4
  • PFV Integrase
 -Click for PubChem compound information. 8
  • PFV Integrase
 -Click for PubChem compound information. 2
  • PFV Integrase
 -Click for PubChem compound information. 4
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • Magnesium Ion
  • PFV Integrase
  • ZZW
 -Click for PubChem compound information. 2
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • DNA (5'-8 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*t
    p*tp*tp*cp*gp*cp*a)-3')
  • Magnesium Ion
  • PFV Integrase
* Click molecule labels to explore molecular sequence information.

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