PFV Target Capture Complex (Tcc) at 3.32 Å Resolution
MMDB ID: 86303PDB ID: 3OS2help
PDB Deposition Date: 2010/9/8help
Updated in MMDB: 05/2011  help
Experimental Method:
X-Ray Diffraction help
Resolution: 3.32  Åhelp
Source Organism:
synthetic constructhelp
Similar Structures: help
Citation: help
Maertens GN, Hare S, Cherepanov P
Nature (2010) 468 p.326
  • help
Biological Unit: decameric; determined by author, and by software (PISA)help
Interactions?
schmatic for structure MMDB ID=86303 biounit 1
Molecular Graphic ?
Molecular graphic for MMDB ID 86303 biounit 1
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ProteinNucleotideChemical
Molecules and interactionshelp
Label Count Molecule Interactions
Proteins and interactions (4 molecules)
4
Integrase
Show annotation
  • DNA (5'-10 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*
    tp*tp*tp*cp*gp*cp*a)-3')
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • DNA (5'-20 D(*cp*cp*cp*gp*ap*gp*gp*cp*ap*cp*gp*tp*
    gp*cp*tp*ap*gp*cp*ap*cp*gp*tp*21 Gp*cp*cp*tp*cp...
  • Integrase
  • Zinc Ion
Nucleotides and interactions (6 molecules)
2
DNA (5'-10 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*
tp*tp*tp*cp*gp*cp*a)-3')
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • Integrase
2
DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
tp*gp*ap*cp*a)-3')
  • DNA (5'-10 D(*ap*tp*tp*gp*tp*cp*ap*tp*gp*gp*ap*ap*
    tp*tp*tp*cp*gp*cp*a)-3')
  • DNA (5'-20 D(*cp*cp*cp*gp*ap*gp*gp*cp*ap*cp*gp*tp*
    gp*cp*tp*ap*gp*cp*ap*cp*gp*tp*21 Gp*cp*cp*tp*cp...
  • Integrase
2
DNA (5'-20 D(*cp*cp*cp*gp*ap*gp*gp*cp*ap*cp*gp*tp*
gp*cp*tp*ap*gp*cp*ap*cp*gp*tp*21 Gp*cp*cp*tp*cp...
  • DNA (5'-15 D(*tp*gp*cp*gp*ap*ap*ap*tp*tp*cp*cp*ap*
    tp*gp*ap*cp*a)-3')
  • DNA (5'-20 D(*cp*cp*cp*gp*ap*gp*gp*cp*ap*cp*gp*tp*
    gp*cp*tp*ap*gp*cp*ap*cp*gp*tp*21 Gp*cp*cp*tp*cp...
  • Integrase
Chemicals and interactions (4 molecules)
 -Click for PubChem compound information. 2
  • Integrase
 -Click for PubChem compound information. 2
  • Integrase
* Click molecule labels to explore molecular sequence information.

Citing MMDB
Madej T, Addess KJ, Fong JH, Geer LY, Geer RC, Lanczycki CJ, Liu C, Lu S, Marchler-Bauer A, Panchenko AR, Chen J, Thiessen PA, Wang Y, Zhang D, Bryant SH. "MMDB: 3D structures and macromolecular interactions." Nucleic Acids Res. 2012 Jan; 40(Database issue):D461-4
.
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