Structure of a Mammalian Ribosomal 40S Subunit Within an 80S Complex Obtained by Docking Homology Models of the RNA and Proteins Into an 8.7 a Cryo-em MAP
MMDB ID: 99595
PDB IDs:
PDB Deposition Date: 2008/3/27help
Updated in MMDB: 06/2014  help
Experimental Method:
Electron Microscopy help
Resolution: 8.7  Åhelp
Source Organism:
Similar Structures: help
Citation:help
Chandramouli P, Topf M, Menetret JF, Eswar N, Cannone JJ, Gutell RR, Sali A, Akey CW
Structure (2008) 16 p.535-548
Biological Unit: 86-merichelp
Interactions?
schmatic for structure MMDB ID=99595 biounit 1
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Molecular graphic for MMDB ID 99595 biounit 1
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Data Set:
Notice
ProteinNucleotide
Molecules and interactionshelp
Label Count Molecule Interactions
Proteins and interactions (50 molecules)
1
40S Ribosomal Protein Rack1
1
40S Ribosomal Protein Sa
1
40S Ribosomal Protein S3e
1
40S Ribosomal Protein S9e
1
40S Ribosomal Protein S2e
1
40S Ribosomal Protein S5e
1
40S Ribosomal Protein S15ae
1
40S Ribosomal Protein S16e
1
40S Ribosomal Protein S20e
1
40S Ribosomal Protein S14e
1
40S Ribosomal Protein S23e
1
40S Ribosomal Protein S18e
1
40S Ribosomal Protein S29e
1
40S Ribosomal Protein S13e
1
40S Ribosomal Protein S11e
1
40S Ribosomal Protein S15e
1
60S Ribosomal Protein L8
1
60S Ribosomal Protein L3
1
60S Ribosomal Protein L4
1
60S Ribosomal Protein L11
1
60S Ribosomal Protein L9
1
60S Ribosomal Protein L7a
1
60S Acidic Ribosomal Protein P0
1
60S Ribosomal Protein L10
1
60S Ribosomal Protein L12
1
60S Ribosomal Protein L13a
1
60S Ribosomal Protein L23
1
60S Ribosomal Protein L27a
1
60S Ribosomal Protein L15e
1
60S Ribosomal Protein L5
1
60S Ribosomal Protein L18
1
60S Ribosomal Protein L19
1
60S Ribosomal Protein L19
1
60S Ribosomal Protein L21
1
60S Ribosomal Protein L17
1
60S Ribosomal Protein L23a
1
60S Ribosomal Protein L26
1
60S Ribosomal Protein L24
1
60S Ribosomal Protein L35
1
60S Ribosomal Protein L35
1
60S Ribosomal Protein L7
1
60S Ribosomal Protein L31
1
60S Ribosomal Protein L32
1
60S Ribosomal Protein L32
1
60S Ribosomal Protein L37a
1
60S Ribosomal Protein L37e
1
60S Ribosomal Protein L39e
1
60S Ribosomal Protein L44e
1
60S Ribosomal Protein L10a
1
60S Ribosomal Protein L30e
Nucleotides and interactions (36 molecules)
1
18S Ribosomal RNA
1
RNA Expansion Segment Es3
1
RNA Expansion Segment Es4
1
RNA Expansion Segment ES6 Part I
1
RNA Expansion Segment ES6 Part Ii
1
RNA Expansion Segment Es9
1
RNA Helix
1
RNA Helix
1
5.8s Ribosomal RNA
1
28S Ribosomal RNA
1
RNA Expansion Segment Es3
1
RNA Expansion Segment Es4
1
RNA Expansion Segment Es5
1
RNA Expansion Segment ES7 Part I
1
RNA Expansion Segment ES7 Part Ii
1
RNA Expansion Segment ES7 Part Iii
1
RNA Expansion Segment Es9
1
RNA Expansion Segment Es12
1
RNA Expansion Segment Es15 Part I
1
RNA Expansion Segment Es15 Part Ii
1
RNA Expansion Segment Es19
1
RNA Expansion Segment Es20
1
RNA Expansion Segment Es24
1
RNA Expansion Segment Es27
1
RNA Expansion Segment Es30
1
RNA Expansion Segment Es31 Part I
1
RNA Expansion Segment Es31 Part Ii
1
RNA Expansion Segment Es39 Part I
1
RNA Expansion Segment Es39 Part Ii
1
RNA Expansion Segment Es39 Part Iii
1
RNA Expansion Segment Es41
1
RNA Expansion Segment ES9 Part2
1
RNA Expansion Segment Es10
1
RNA Helices
1
5S Ribosomal RNA
1
E Site T-rna
* Click molecule labels to explore molecular sequence information.

Citing MMDB
Madej T, Addess KJ, Fong JH, Geer LY, Geer RC, Lanczycki CJ, Liu C, Lu S, Marchler-Bauer A, Panchenko AR, Chen J, Thiessen PA, Wang Y, Zhang D, Bryant SH. "MMDB: 3D structures and macromolecular interactions." Nucleic Acids Res. 2012 Jan; 40(Database issue):D461-4
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