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5PH1:
PanDDA analysis group deposition -- Crystal Structure of JMJD2D in complex with N09449a
PDB ID:
5PH1
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MMDB ID:
148127
PDB Deposition Date:
2017/2/7
Updated in MMDB:
2017/10
Experimental Method:
x-ray diffraction
Resolution:
1.249 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5PH1: monomeric; determined by author
Molecular Components in 5PH1
Label
Count
Molecule
Protein (1 molecule)
A
1
Lysine-specific Demethylase 4D
(Gene symbol:
KDM4D
)
Chemicals and Non-standard biopolymers (15 molecules)
1
1
ZINC ION
2
1
NICKEL (II) ION
3
1
N-OXALYLGLYCINE
4
7
1,2-ETHANEDIOL
5
4
SULFATE ION
6
1
6-fluoro-1,3-benzothiazol-2-amine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303