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4TUP:
Structure of human DNA polymerase beta complexed with GG as the template (GG0b) in a 1-nucleotide gapped DNA
PDB ID:
4TUP
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MMDB ID:
123969
PDB Deposition Date:
2014/6/24
Updated in MMDB:
2023/12
Experimental Method:
x-ray diffraction
Resolution:
1.8 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 4TUP: tetrameric; determined by author and by software (PISA)
Molecular Components in 4TUP
Label
Count
Molecule
Protein (1 molecule)
A
1
DNA Polymerase Beta
(Gene symbol:
POLB
)
Nucleotides(3 molecules)
T
1
DNA (5'-d(*cp*cp*cp*ap*cp*gp*gp*cp*cp*cp*ap*tp*cp*ap*cp*c)-3')
P
1
DNA (5'-d(*gp*gp*tp*gp*ap*tp*gp*gp*gp*c)-3')
D
1
DNA (5'-d(p*gp*tp*gp*gp*g)-3')
Chemicals and Non-standard biopolymers (2 molecules)
1
2
SODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303