|
CDD
acc |
CD short
name |
CD short
description |
|
cd00005 |
CBM9 |
Family 9 carbohydrate-binding module |
|
cd00007 |
35EXOc |
3'-5' exonuclease |
|
cd00013 |
ADF |
Actin depolymerisation factor/cofilin -like domains |
|
cd00014 |
CH |
Calponin homology domain |
|
cd00016 |
alkPPc |
Alkaline phosphatase homologues |
|
cd00018 |
AP2 |
DNA-binding domain found in transcription regulators in plants |
|
cd00019 |
AP2Ec |
AP endonuclease family 2 |
|
cd00030 |
C2 |
Protein kinase C conserved region 2 (CalB) |
|
cd00032 |
CASc |
Caspase, interleukin-1 beta converting enzyme (ICE) homologues |
|
cd00038 |
CAP_ED |
effector domain of the CAP family of transcription factors |
|
cd00040 |
CSF2 |
Granulocyte Macrophage Colony Stimulating Factor (GM-CSF) |
|
cd00041 |
CUB |
CUB domain; extracellular domain |
|
cd00042 |
CY |
Cystatin-like domain |
|
cd00043 |
CYCLIN |
Cyclin box fold |
|
cd00045 |
DED |
Death effector domain |
|
cd00046 |
DEXDc |
DEAD-like helicases superfamily |
|
cd00047 |
PTPc |
Protein tyrosine phosphatases |
|
cd00048 |
DSRM |
Double-stranded RNA binding motif |
|
cd00050 |
MH2 |
MH2 domain; C terminal domain of SMAD family proteins |
|
cd00051 |
EFh |
EF-hand, calcium binding motif |
|
cd00057 |
FA58C |
Coagulation factor 5/8 C-terminal domain, discoidin domain |
|
cd00058 |
FGF |
Acidic and basic fibroblast growth factor family |
|
cd00059 |
FH |
Forkhead (FH), also known as a "winged helix" |
|
cd00060 |
FHA |
Forkhead associated domain |
|
cd00063 |
FN3 |
Fibronectin type 3 domain |
|
cd00069 |
GHB |
Glycoprotein hormone beta chain homologues |
|
cd00071 |
GuKc |
Guanylate kinase homologues |
|
cd00073 |
H15 |
linker histone 1 and histone 5 domains |
|
cd00079 |
HELICc |
Helicase superfamily c-terminal domain |
|
cd00084 |
HMG_box |
High Mobility Group (HMG)-box |
|
cd00086 |
homeodomain |
Homeodomain; DNA binding domains |
|
cd00092 |
HTH_CRP |
helix_turn_helix,
|
|
cd00093 |
HTH_XRE |
Helix-turn-helix XRE-family like proteins |
|
cd00094 |
HX |
Hemopexin-like repeats |
|
cd00100 |
IL1 |
Interleukin-1 homologues |
|
cd00102 |
IPT |
Immunoglobulin-like fold, Plexins, Transcription factors |
|
cd00103 |
IRF |
Interferon Regulatory Factor (IRF); also known as trytophan pentad repeat |
|
cd00105 |
KH |
K homology RNA-binding domain, binds single-stranded RNA |
|
cd00108 |
KR |
Kringle domain |
|
cd00109 |
KU |
BPTI/Kunitz family of serine protease inhibitors |
|
cd00110 |
LamG |
Laminin G domain |
|
cd00113 |
PLAT |
PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain |
|
cd00115 |
LMWPc |
Low molecular weight phosphatase family |
|
cd00116 |
LRR_RI |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily |
|
cd00119 |
LYZ1 |
C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA) |
|
cd00122 |
MBD |
Methyl-CpG binding domain |
|
cd00127 |
DSPc |
Dual specificity phosphatases |
|
cd00130 |
PAS |
PAS domain |
|
cd00134 |
PBPb |
A diverse group of periplasmic transport receptors for lysine/arginine/ornithine (LAO), glutamine, histidine, sulfate, phosphate, molybdate, and methanol are included in the PBPb CD |
|
cd00137 |
PLCc |
Phospholipase C, catalytic domain |
|
cd00147 |
PLAc |
Cytoplasmic phospholipase A2, catalytic subunit |
|
cd00148 |
PROF |
Profilin |
|
cd00152 |
PTX |
Pentraxins |
|
cd00153 |
RA |
RasGTP binding domain from guanine nucleotide exchange factors |
|
cd00154 |
RAB |
Rab subfamily of small GTPases |
|
cd00156 |
REC |
Signal receiver domain |
|
cd00157 |
|
|
|
cd00161 |
RICIN |
Ricin-type beta-trefoil |
|
cd00163 |
RNAse_Pc |
Pancreatic ribonucleases (RNAse) |
|
cd00164 |
S1 |
Ribosomal protein S1-like RNA-binding domain |
|
cd00168 |
SCP |
SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains |
|
cd00170 |
SEC14 |
Sec14p-like lipid-binding domain |
|
cd00173 |
SH2 |
Src homology 2 domains |
|
cd00177 |
START |
START (STeroidogenic Acute Regulatory (STAR) related lipid Transfer) Domain |
|
cd00178 |
STI |
Soybean trypsin inhibitor (Kunitz) family of protease inhibitors |
|
cd00182 |
TBOX |
T-box DNA binding domain of the T-box family of transcriptional regulators |
|
cd00184 |
TNF |
Tumor Necrosis Factor |
|
cd00187 |
TOP4c |
DNA Topoisomerase, subtype IIA |
|
cd00189 |
TPR |
Tetratricopeptide repeat domain |
|
cd00190 |
Tryp_SPc |
Trypsin-like serine protease |
|
cd00192 |
TyrKc |
Tyrosine kinase, catalytic domain |
|
cd00195 |
UBCc |
Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain |
|
cd00196 |
UBQ |
Ubiquitin homologs |
|
cd00197 |
VHS |
Domain present in VPS-27, Hrs and STAM |
|
cd00198 |
VWA |
von Willebrand factor (vWF) type A domain |
|
cd00200 |
WD40 |
WD40 domain |
|
cd00203 |
ZnMc |
Zinc-dependent metalloprotease |
|
cd00204 |
ANK |
ankyrin repeats |
|
cd00209 |
DHFR |
Dihydrofolate reductase |
|
cd00210 |
PTS_IIA_glc |
PTS_IIA, PTS system, glucose/sucrose specific IIA subunit |
|
cd00211 |
PTS_IIA_fru |
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit |
|
cd00213 |
S-100/ICaBP-like |
S-100/ICaBP-like domain; S-100/intestinal calcium binding domain |
|
cd00218 |
GlcAT-I |
Beta1,3-glucuronyltransferase I (GlcAT-I) domain |
|
cd00226 |
PRCH |
Photosynthetic reaction center (RC) complex, subunit H |
|
cd00227 |
CPT |
Chloramphenicol (Cm) phosphotransferase |
|
cd00229 |
SEST |
Streptomyces scabies esterase |
|
cd00233 |
VIP2 |
VIP2; A family of actin-ADP-ribosylating toxin |
|
cd00234 |
RPA14 |
Replication Protein A (RPA), Subunit |
|
cd00237 |
p23 |
homolog to co-chaperone p23 |
|
cd00241 |
CDH_cytochrome |
Cellobiose dehydrogenase (CellobioseDH), cytochrome domain |
|
cd00244 |
AlgLyase |
Alginate Lyase A1-III |
|
cd00245 |
Glm_e |
Coenzyme B12 - dependent glutamate mutase epsilon subunit |
|
cd00249 |
AGE |
AGE domain; N-acyl-D-glucosamine 2-epimerase domain |
|
cd00250 |
CAS_like |
Clavaminic acid synthetase (CAS) -like |
|
cd00252 |
SPARC_EC |
SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP) |
|
cd00255 |
nidG2 |
Nidogen, G2 domain |
|
cd00257 |
Fascin |
Fascin-like domain |
|
cd00260 |
Sialidase |
Sialidases or neuraminidases |
|
cd00261 |
AAI_amylase/trypsin_inhibitor |
Trypsin-alpha amylase inhibitor domain, Alpha Amylase Inhibitor (AAI) subgroup |
|
cd00262 |
AAI_plantLTP |
Plant lipid transfer protein (LYP) domain, Alpha Amylase Inhibitor (AAI) subgroup |
|
cd00267 |
ABC_ATPase |
ABC (ATP-binding cassette) transporter nucleotide-binding domain |
|
cd00270 |
TRAF |
Tnf Receptor Associated Factor 2 domain |
|
cd00275 |
C2_2 |
Protein kinase C conserved region 2, subgroup 2 |
|
cd00276 |
C2_1 |
Protein kinase C conserved region 2, subgroup 1 |
|
cd00286 |
Tubulin/FtsZ |
Tubulin/FtsZ: Family includes tubulin alpha, beta and gamma chains, and FtsZ, which are involved in polymer formation |
|
cd00287 |
ribokinase_like |
ribokinase family: Family of kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group |
|
|
|
|
|
cd00292 |
EF1B |
Elongation factor 1 beta (EF1B) guanine nucleotide exchange domain |
|
cd00296 |
SIR2 |
Sir2 is a member of the set of proteins known as the silent information regulators |
|
cd00312 |
Esterase_lipase |
Esterases and lipases (includes fungal lipases, cholinesterases, etc.) |
|
cd00315 |
Cyt_C5_DNA_methylase |
Cytosine-C5 specific DNA methylases |
|
cd00317 |
pro_isomerase |
Cyclophilin type peptidyl-prolyl cis-trans isomerase |
|
cd00346 |
trp_synt_A |
Tryptophan synthase alpha chain |
|
cd00363 |
PFK |
Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate |
|
cd00367 |
PTS-HPr |
Histidine-containing phosphocarrier protein |
|
cd00371 |
HMA |
Heavy-metal-associated domain |
|
cd00383 |
trans_reg_C |
Transcriptional regulatory protein, C terminal |
|
cd00397 |
DNA_BRE_C |
DNA breaking-rejoining enzymes, C-terminal catalytic domain |
|
cd00398 |
Aldolase_II |
Class II Aldolase and Adducin head (N-terminal) domain |
|
cd00410 |
Adenylsucc_synt |
Adenylosuccinate synthetase |
|
cd00423 |
Pterin_binding |
Pterin binding enzymes |
|
cd00431 |
cysteine_hydrolases |
Cysteine hydrolases |
|
cd00433 |
Peptidase_M17 |
Cytosol aminopeptidase family, catalytic domain |
|
cd00435 |
ACBP |
Acyl CoA binding protein |
|
cd00447 |
NusB_Sun |
RNA binding domain of NusB (N protein-Utilization Substance B) and Sun (also known as RrmB or Fmu) proteins |
|
cd00449 |
PLPDE_IV |
PyridoxaL 5'-Phosphate Dependent Enzymes class IV |
|
cd00453 |
FTBP_aldolase_II |
Fructose/tagarose-bisphosphate aldolase class II |
|
cd00457 |
PEBP_RKIP |
bacterial/archael PhosphatidylEthanolamine-Binding Protein (PEBP) and its eukarytic homolog Raf Kinase Inhibitor Protein |
|
cd00487 |
Pep_deformylase |
Polypeptide deformylase |
|
cd00503 |
Frataxin |
Frataxin is a nuclear-encoded mitochondrial protein implicated in Friedreich's ataxia (FRDA), an human autosomal recessive neurodegenerative disease |
|
cd00522 |
Hemerythrin |
Hemerythrin (Hr) is a non-heme diiron oxygen transport protein |
|
cd00527 |
IF6 |
Ribosome anti-association factor |
|
cd00529 |
RuvC_resolvase |
Holliday junction resolvases (HJRs) |
|
cd00531 |
NTF2_like |
Nuclear transport factor 2 (NTF2-like) superfamily |
|
cd00532 |
MGS |
MGS-like domain |
|
cd00537 |
MTHFR |
Methylenetetrahydrofolate reductase |
|
cd00550 |
ArsA_ATPase |
Oxyanion-translocating ATPase |
|
cd00562 |
NifX_NifB |
This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY |
|
cd00587 |
Prismane |
Prismane |
|
cd00635 |
YBL036c_PLPDEIII |
PLP dependent enzymes class III |
|
cd00651 |
TFold |
Tunnelling fold (T-fold) |
|
cd00657 |
Ferritin_like |
Ferritin-like, diiron-carboxylate proteins |
|
cd00802 |
class_I_aaRS_core |
Class I amino acyl-tRNA synthetase (aaRS) catalytic core domain |
|
cd00820 |
Eukaryotic_PEPCK_ATP |
Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme |
|
cd00945 |
Aldolase_Class_I |
Class I aldolases |
|
cd00985 |
Maf_Ham1 |
Maf, a nucleotide binding protein, ... A Ham1-related protein ... is a novel NTPase |
|
cd01067 |
globin_like |
superfamily containing globins and truncated hemoglobins |
|
cd01120 |
RecA-like_NTPases |
RecA-like NTPases |
|
cd01292 |
metallo-dependent_hydrolases |
Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) |
|
cd01341 |
ADP_ribosyl |
ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates |
|
cd01345 |
OM_channels |
Porin superfamily |
|
cd01363 |
Motor_domain |
Myosin and Kinesin motor domain |
|
cd02065 |
B12-binding_like |
B12 binding domain |