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Conserved domains on  [gi|578800747|ref|XP_006711307|]
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flavin-containing monooxygenase 5 isoform X3 [Homo sapiens]

Protein Classification

flavin-binding monooxygenase-like family protein( domain architecture ID 1000557)

flavin-binding monooxygenase-like family protein; such as flavin-containing monooxygenases (FMOs) that catalyze the monooxygenation of a variety of substrates

EC:  1.14.13.-
Gene Ontology:  GO:0004497

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FMO-like super family cl30939
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 3-282 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


The actual alignment was detected with superfamily member pfam00743:

Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 544.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747    3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNF 82
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   83 MHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFP 162
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  163 GIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTH 242
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 578800747  243 FIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRFIRHE 282
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKE 280
 
Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 3-282 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 544.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747    3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNF 82
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   83 MHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFP 162
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  163 GIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTH 242
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 578800747  243 FIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRFIRHE 282
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKE 280
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-278 8.19e-53

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 178.90  E-value: 8.19e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQEnpeegrasiYKSVIINTSKEMMCFSDYPIPDHYP 80
Cdd:COG2072    4 TEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNR---------YPGLRLDTPSHLYSLPFFPNWSDDP 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  81 NFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDfatSGQWEVVTESEGKKEmnvFDGVMVCTGHHTNAHLPleS 160
Cdd:COG2072   75 DFPTGDEILAYLEAYADKFGLRRPIRFGTEVTSARWDEA---DGRWTVTTDDGETLT---ARFVVVATGPLSRPKIP--D 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747 161 FPGIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVgDYGyPADVLFSSRL 240
Cdd:COG2072  147 IPGLEDFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRP-NYD-PERGRPANYL 224

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 578800747 241 THFIWKICGQSLANKYLEKKINQRFDHEMFG-LKPKHRF 278
Cdd:COG2072  225 GLEAPPALNRRDARAWLRRLLRAQVKDPELGlLTPDYPP 263
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 1-216 4.36e-30

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 118.81  E-value: 4.36e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEG-----------RASIYKSVIINTSKEMMC 69
Cdd:PLN02172   8 INSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMG 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  70 FSDYPI----------PDHYPNFMhnaQVLEYFRMYAKEFDLLKYIRFKTTVcsVKKQPdfaTSGQWEVVTE-SEGKKEM 138
Cdd:PLN02172  88 YRDFPFvprfddesrdSRRYPSHR---EVLAYLQDFAREFKIEEMVRFETEV--VRVEP---VDGKWRVQSKnSGGFSKD 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747 139 NVFDGVMVCTGHHTN---AHLPlesfpGIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLST 215
Cdd:PLN02172 160 EIFDAVVVCNGHYTEpnvAHIP-----GIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIAS 234


                 .
gi 578800747 216 R 216
Cdd:PLN02172 235 R 235
 
Name Accession Description Interval E-value
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
 3-282 0e+00

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 544.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747    3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNF 82
Cdd:pfam00743   1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   83 MHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATSGQWEVVTESEGKKEMNVFDGVMVCTGHHTNAHLPLESFP 162
Cdd:pfam00743  81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  163 GIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVGDYGYPADVLFSSRLTH 242
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 578800747  243 FIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRFIRHE 282
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKE 280
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-278 8.19e-53

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 178.90  E-value: 8.19e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQEnpeegrasiYKSVIINTSKEMMCFSDYPIPDHYP 80
Cdd:COG2072    4 TEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRDNR---------YPGLRLDTPSHLYSLPFFPNWSDDP 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  81 NFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDfatSGQWEVVTESEGKKEmnvFDGVMVCTGHHTNAHLPleS 160
Cdd:COG2072   75 DFPTGDEILAYLEAYADKFGLRRPIRFGTEVTSARWDEA---DGRWTVTTDDGETLT---ARFVVVATGPLSRPKIP--D 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747 161 FPGIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLSTRRGAWILNRVgDYGyPADVLFSSRL 240
Cdd:COG2072  147 IPGLEDFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPRP-NYD-PERGRPANYL 224

                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 578800747 241 THFIWKICGQSLANKYLEKKINQRFDHEMFG-LKPKHRF 278
Cdd:COG2072  225 GLEAPPALNRRDARAWLRRLLRAQVKDPELGlLTPDYPP 263
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
 1-216 4.36e-30

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 118.81  E-value: 4.36e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEG-----------RASIYKSVIINTSKEMMC 69
Cdd:PLN02172   8 INSQHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMG 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  70 FSDYPI----------PDHYPNFMhnaQVLEYFRMYAKEFDLLKYIRFKTTVcsVKKQPdfaTSGQWEVVTE-SEGKKEM 138
Cdd:PLN02172  88 YRDFPFvprfddesrdSRRYPSHR---EVLAYLQDFAREFKIEEMVRFETEV--VRVEP---VDGKWRVQSKnSGGFSKD 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747 139 NVFDGVMVCTGHHTN---AHLPlesfpGIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLST 215
Cdd:PLN02172 160 EIFDAVVVCNGHYTEpnvAHIP-----GIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIAS 234


                 .
gi 578800747 216 R 216
Cdd:PLN02172 235 R 235
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 3-41 3.07e-05

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 45.21  E-value: 3.07e-05
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 578800747   3 KKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGL 41
Cdd:COG1232    1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGL 39
PRK07233 PRK07233
hypothetical protein; Provisional
 5-41 5.25e-05

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 44.49  E-value: 5.25e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 578800747   5 RIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGL 41
Cdd:PRK07233   1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGL 37
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 2-44 1.43e-04

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 43.23  E-value: 1.43e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 578800747   2 TKKRIAVIGGGVSGLSsikcCVEE----GLEPVCFERTDDIGGLWRF 44
Cdd:PRK12810 142 TGKKVAVVGSGPAGLA----AADQlaraGHKVTVFERADRIGGLLRY 184
Ppro0129 COG2907
Predicted flavin-containing amine oxidase [General function prediction only];
1-18 3.68e-04

Predicted flavin-containing amine oxidase [General function prediction only];


Pssm-ID: 442151 [Multi-domain]  Cd Length: 423  Bit Score: 42.03  E-value: 3.68e-04
                         10
                 ....*....|....*...
gi 578800747   1 MTKKRIAVIGGGVSGLSS 18
Cdd:COG2907    1 MARMRIAVIGSGISGLTA 18
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
8-49 7.92e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 37.51  E-value: 7.92e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 578800747    8 VIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPE 49
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPG 42
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 1-52 1.03e-03

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 40.61  E-value: 1.03e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGR 52
Cdd:COG3349    1 MMPPRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSFPDPDTGL 52
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 2-44 1.06e-03

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 40.50  E-value: 1.06e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 578800747   2 TKKRIAVIGGGVSGLSsikcC----VEEGLEPVCFERTDDIGGLWRF 44
Cdd:COG0493  120 TGKKVAVVGSGPAGLA----AayqlARAGHEVTVFEALDKPGGLLRY 162
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
 2-44 1.36e-03

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 40.50  E-value: 1.36e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 578800747   2 TKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRF 44
Cdd:PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTF 368
PRK07208 PRK07208
hypothetical protein; Provisional
 1-44 2.45e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 39.49  E-value: 2.45e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|..
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGL--------WRF 44
Cdd:PRK07208   2 TNKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGIsrtvtykgNRF 53
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
58-230 3.40e-03

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 38.74  E-value: 3.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747   58 SVIINTSKEMMCFSDYPipdhypnfmHNAQVLEYFRMYAKEFDLLkyIRFKTTVCSVKKQpdfatSGQWEVVTESEgkke 137
Cdd:pfam13738  56 AISPGTSPAFTFNREHP---------SGNEYAEYLRRVADHFELP--INLFEEVTSVKKE-----DDGFVVTTSKG---- 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578800747  138 mnVF--DGVMVCTGHHTNAHLPleSFPGIEKfkgqyfHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQVFLST 215
Cdd:pfam13738 116 --TYqaRYVIIATGEFDFPNKL--GVPELPK------HYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLY 185

                         170
                  ....*....|....*
gi 578800747  216 RRGAWiLNRVGDYGY 230
Cdd:pfam13738 186 RGSEW-EDRDSDPSY 199
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
1-43 4.43e-03

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 38.69  E-value: 4.43e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 578800747   1 MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWR 43
Cdd:COG1148  138 PVNKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAA 180
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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