NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|339895881|ref|NP_001229965|]
View 

B(0,+)-type amino acid transporter 1 [Homo sapiens]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 26-484 3.17e-170

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 488.87  E-value: 3.17e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   26 LQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYG 105
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  106 PIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKL 185
Cdd:TIGR00911 120 PLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKL 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  186 VIVAIIIISGLVLLAQGNTKNFD--NSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLV 263
Cdd:TIGR00911 200 LALLLIIITGWVQLGKGGVESLNpkNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIV 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  264 TACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSY 343
Cdd:TIGR00911 280 TFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSM 359

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  344 ISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVF 423
Cdd:TIGR00911 360 IHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLF 439

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 339895881  424 LVLAPIISKPTWEYLYcVLFILSGLLFYFLFVHY--KFGWAQKISKPITMHLQMLMEVVPPEE 484
Cdd:TIGR00911 440 LIILSLYSPPVGCGVG-FIIMLTGVPVYFFGVWWqnKPKWFRYLIVSKTVLLQKVLEVVKPQK 501
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 26-484 3.17e-170

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 488.87  E-value: 3.17e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   26 LQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYG 105
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  106 PIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKL 185
Cdd:TIGR00911 120 PLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKL 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  186 VIVAIIIISGLVLLAQGNTKNFD--NSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLV 263
Cdd:TIGR00911 200 LALLLIIITGWVQLGKGGVESLNpkNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIV 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  264 TACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSY 343
Cdd:TIGR00911 280 TFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSM 359

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  344 ISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVF 423
Cdd:TIGR00911 360 IHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLF 439

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 339895881  424 LVLAPIISKPTWEYLYcVLFILSGLLFYFLFVHY--KFGWAQKISKPITMHLQMLMEVVPPEE 484
Cdd:TIGR00911 440 LIILSLYSPPVGCGVG-FIIMLTGVPVYFFGVWWqnKPKWFRYLIVSKTVLLQKVLEVVKPQK 501
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
20-454 5.70e-72

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 234.79  E-value: 5.70e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  20 EPKTTSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPclIIWAACGVLATLGALCFAELGTMITKSGGEYPY 99
Cdd:COG0531    3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAI--LAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 100 LMEAYGPIPAYLFSWASLIVIkPTSFAIICLSFSEYVCAPFyvgckpPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNI 179
Cdd:COG0531   81 ARRALGPLLGFLAGWALLLSY-VLAVAAVAVAFGGYLSSLF------PAGGSVLIALVLILLLTLLNLRGVKESAKVNNI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 180 FTAAKLVIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFynglWAYDGWNQLNYITEELRNPYRNLPLAIIIG 259
Cdd:COG0531  154 LTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGGLSGVLAALALAF----FAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 260 IPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYP-ASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHML 338
Cdd:COG0531  230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 339 KVLSYISVRRLTPAPAIIFYGIIATIYIIPG--DINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVP-VVIPV 415
Cdd:COG0531  310 KVFAKVHPRFGTPVNAILLTGVIALLLLLLGaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPlPLIPI 389

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 339895881 416 LMTLISVFLVLAPiiskPTWEYLYCVLFILSGLLFYFLF 454
Cdd:COG0531  390 LGILLCLFLLYLL----GPGALLIGLVLLAIGLLLYLLY 424
AA_permease_2 pfam13520
Amino acid permease;
30-430 9.40e-42

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 154.01  E-value: 9.40e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   30 LGLISGISIIVGTIIGSGIFVSPksvlsNTEAVGPCLIIWA--ACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPI 107
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAP-----LVASGGPALIVWGwiAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  108 PAYLFSWASLIVIKPTsFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVI 187
Cdd:pfam13520  76 VAFLAGWSNWFAYVLG-LASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLL 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  188 VAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGA--ISLAFYNGLWAYDGWNQLNYITEElrNPYRNLPLAIIIGIPLVTA 265
Cdd:pfam13520 155 PLILIIILGLVTADGGGFNLLSGEWHTFFPDGWpgVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVIIVGV 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  266 CYILMNVSYFTVMT---ATELLQSQAVAVTFGDRVLYP-ASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHM--LK 339
Cdd:pfam13520 233 LYILVNIAFFGVVPddeIALSSGLGQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLpfSR 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  340 VLSYISvRRLTPAPAIIFYGIIATI-----YIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIp 414
Cdd:pfam13520 313 FFAKVN-KFGSPIRAIILTAILSLIllllfLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVA- 390

                         410
                  ....*....|....*.
gi 339895881  415 VLMTLISVFLVLAPII 430
Cdd:pfam13520 391 IFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
26-452 3.78e-36

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 139.22  E-value: 3.78e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  26 LQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYG 105
Cdd:PRK11357   6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 106 PIPAYLFSWASLIVIKPTSFAIICLSFSEYVCapFYVGCKPpqIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKL 185
Cdd:PRK11357  86 RPLAFLSGWASFWANDAPSLSIMALAIVSNLG--FLTPIDP--LLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKI 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 186 VIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTA 265
Cdd:PRK11357 162 IPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLV 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 266 CYILMNVSYFTVMTATELLQSQ---AVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLS 342
Cdd:PRK11357 242 LYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFG 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 343 YISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRftRKELERPIKVPVVIPVLMTL--- 419
Cdd:PRK11357 322 HVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCR--KRDDYKPLWRTPAFGLMTTLaia 399

                        410       420       430
                 ....*....|....*....|....*....|...
gi 339895881 420 ISVFLVLAPIISKPTWEYLYCVLFILSGLLFYF 452
Cdd:PRK11357 400 SSLILVASTFVWAPIPGLICAVIVIATGLPAYA 432
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 26-484 3.17e-170

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 488.87  E-value: 3.17e-170
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   26 LQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYG 105
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVGLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  106 PIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKL 185
Cdd:TIGR00911 120 PLLAFLRLWIELLVIRPGSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKL 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  186 VIVAIIIISGLVLLAQGNTKNFD--NSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLV 263
Cdd:TIGR00911 200 LALLLIIITGWVQLGKGGVESLNpkNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIV 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  264 TACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSY 343
Cdd:TIGR00911 280 TFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSM 359

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  344 ISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVF 423
Cdd:TIGR00911 360 IHVKRLTPLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLF 439

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 339895881  424 LVLAPIISKPTWEYLYcVLFILSGLLFYFLFVHY--KFGWAQKISKPITMHLQMLMEVVPPEE 484
Cdd:TIGR00911 440 LIILSLYSPPVGCGVG-FIIMLTGVPVYFFGVWWqnKPKWFRYLIVSKTVLLQKVLEVVKPQK 501
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
20-454 5.70e-72

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 234.79  E-value: 5.70e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  20 EPKTTSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPclIIWAACGVLATLGALCFAELGTMITKSGGEYPY 99
Cdd:COG0531    3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAI--LAWLIAGLLALLVALSYAELASAFPRAGGAYTY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 100 LMEAYGPIPAYLFSWASLIVIkPTSFAIICLSFSEYVCAPFyvgckpPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNI 179
Cdd:COG0531   81 ARRALGPLLGFLAGWALLLSY-VLAVAAVAVAFGGYLSSLF------PAGGSVLIALVLILLLTLLNLRGVKESAKVNNI 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 180 FTAAKLVIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFynglWAYDGWNQLNYITEELRNPYRNLPLAIIIG 259
Cdd:COG0531  154 LTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGGLSGVLAALALAF----FAFTGFEAIANLAEEAKNPKRNIPRAIILS 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 260 IPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYP-ASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHML 338
Cdd:COG0531  230 LLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPwGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP 309

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 339 KVLSYISVRRLTPAPAIIFYGIIATIYIIPG--DINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVP-VVIPV 415
Cdd:COG0531  310 KVFAKVHPRFGTPVNAILLTGVIALLLLLLGaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPlPLIPI 389

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 339895881 416 LMTLISVFLVLAPiiskPTWEYLYCVLFILSGLLFYFLF 454
Cdd:COG0531  390 LGILLCLFLLYLL----GPGALLIGLVLLAIGLLLYLLY 424
AA_permease_2 pfam13520
Amino acid permease;
30-430 9.40e-42

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 154.01  E-value: 9.40e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   30 LGLISGISIIVGTIIGSGIFVSPksvlsNTEAVGPCLIIWA--ACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPI 107
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAP-----LVASGGPALIVWGwiAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  108 PAYLFSWASLIVIKPTsFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVI 187
Cdd:pfam13520  76 VAFLAGWSNWFAYVLG-LASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLL 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  188 VAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGA--ISLAFYNGLWAYDGWNQLNYITEElrNPYRNLPLAIIIGIPLVTA 265
Cdd:pfam13520 155 PLILIIILGLVTADGGGFNLLSGEWHTFFPDGWpgVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVIIVGV 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  266 CYILMNVSYFTVMT---ATELLQSQAVAVTFGDRVLYP-ASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHM--LK 339
Cdd:pfam13520 233 LYILVNIAFFGVVPddeIALSSGLGQVAALLFQAVGGKwGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLpfSR 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  340 VLSYISvRRLTPAPAIIFYGIIATI-----YIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIp 414
Cdd:pfam13520 313 FFAKVN-KFGSPIRAIILTAILSLIllllfLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVA- 390

                         410
                  ....*....|....*.
gi 339895881  415 VLMTLISVFLVLAPII 430
Cdd:pfam13520 391 IFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
26-452 3.78e-36

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 139.22  E-value: 3.78e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  26 LQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYG 105
Cdd:PRK11357   6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 106 PIPAYLFSWASLIVIKPTSFAIICLSFSEYVCapFYVGCKPpqIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKL 185
Cdd:PRK11357  86 RPLAFLSGWASFWANDAPSLSIMALAIVSNLG--FLTPIDP--LLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKI 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 186 VIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTA 265
Cdd:PRK11357 162 IPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLV 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 266 CYILMNVSYFTVMTATELLQSQ---AVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLS 342
Cdd:PRK11357 242 LYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFG 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 343 YISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRftRKELERPIKVPVVIPVLMTL--- 419
Cdd:PRK11357 322 HVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCR--KRDDYKPLWRTPAFGLMTTLaia 399

                        410       420       430
                 ....*....|....*....|....*....|...
gi 339895881 420 ISVFLVLAPIISKPTWEYLYCVLFILSGLLFYF 452
Cdd:PRK11357 400 SSLILVASTFVWAPIPGLICAVIVIATGLPAYA 432
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 1-398 6.12e-24

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 104.90  E-value: 6.12e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881    1 MGDTGLRKRREDEKSIQSQEpkttsLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEavGPCLII-WAACGVLATLG 79
Cdd:TIGR00906   6 FARCLIRRKIVDLDSREESK-----MKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDS--GPAIVLsFLISGLAAVLS 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   80 ALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSW---------------------ASLIVIKPTSFAIICLSFSEYVCA 138
Cdd:TIGR00906  79 GFCYAEFGARVPKAGSAYLYSYVTVGELWAFITGWnlileyvigtaavarswsayfDELLNKQIGQFRRTYFKLNYDGLA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  139 PFyvgckpPQIVVKCLaaaaILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVllaQGNTKNFDNSFE------ 212
Cdd:TIGR00906 159 EY------PDFFAVCL----ILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFT---KADVANWSITEEkgaggf 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  213 ---GAQLSVGAISLAFYnglwAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSyFTVMTATELLQSQA- 288
Cdd:TIGR00906 226 mpyGFTGVLSGAATCFF----AFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAA-LTLMMPYYLLDPDAp 300

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  289 VAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIP 368
Cdd:TIGR00906 301 FPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFL 380

                         410       420       430
                  ....*....|....*....|....*....|
gi 339895881  369 GDINSLVNYFSFAAWLFYGLTILGLIVMRF 398
Cdd:TIGR00906 381 FDLKALVDLLSIGTLLAYSLVAACVLILRY 410
AA_permease pfam00324
Amino acid permease;
36-467 5.18e-17

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 83.14  E-value: 5.18e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   36 ISIIVGTIIGSGIFVSPKSVLSNTEAVGpCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPA------ 109
Cdd:pfam00324   3 QMIALGGVIGTGLFVGSGSVLGQAGPAG-ALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGfatgwn 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  110 YLFSWASLIVIKPTSfAIICLSFSEYVCAPFYVGCkppqivvkcLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVA 189
Cdd:pfam00324  82 YWLSWITVLALELTA-ASILIQFWELVPDIPYLWV---------WGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAII 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  190 IIIISGLVLLAQGNTK---------------NFDNSFEGAQLSVGAISlafyngLWAYDGWNQLNYITEELRNPYRNLPL 254
Cdd:pfam00324 152 GFIIVGIILLSGGNPNdgaifrylgdnggknNFPPGFGKGFISVFVIA------FFAFTGIELVGIAAGEVKNPEKSIPK 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  255 AIIIGIPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAF-------STIGAANGTCFTAGRL 327
Cdd:pfam00324 226 AILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSASAASPFVIFFKFLGISGLAPLinaviltAALSAANSSLYSGSRM 305

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  328 IYVAGREGHMLKVLSYISvRRLTPAPAIIFYGIIATIYIIPGDINS------LVNYFSFAAWLFYGLTILGLIVMRFTRK 401
Cdd:pfam00324 306 LYSLARDGLAPKFLKKVD-KRGVPLRAILVSMVISLLALLLASLNPaivfnfLLAISGLSGLIVWGLISLSHLRFRKAFK 384

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  402 ELER---------PIKVPVVIPVLMTLISVFLVLAPIISKP------TWEYLYCVLFILSGLLFYFLFVHYKFGWAQKIS 466
Cdd:pfam00324 385 YQGRsidelpfkaPLGPLGVILGLAAIIIILIIQFLYAFLPvpggpkNWGAGSFAAAYLIVLLFLIILIGVKLHVKNWKP 464


                  .
gi 339895881  467 K 467
Cdd:pfam00324 465 Q 465
PRK10644 PRK10644
arginine/agmatine antiporter;
28-472 9.02e-13

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 70.20  E-value: 9.02e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  28 KELGLISGISIIVGTIIGSGIFVSPksvlSNTEAVGPCLII-WAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGP 106
Cdd:PRK10644   8 HKVGLIPVTLMVAGNIMGSGVFLLP----ANLASTGGIAIYgWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFGP 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 107 IPAY---LFSWASlIVIKPTSFAIICLSFSEYvcapFYVGCKPPqiVVKCLAAAAILFIST-VNSLSVRLGSYVQNIFTA 182
Cdd:PRK10644  84 FLGYqtnVLYWLA-CWIGNIAMVVIGVGYLSY----FFPILKDP--LVLTITCVVVLWIFVlLNIVGPKMITRVQAVATV 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 183 AKLV-IVAIIII-----SGLVLLAQGNTKNFdNSFegaqlsvGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAI 256
Cdd:PRK10644 157 LALIpIVGIAVFgwfwfRGETYMAAWNVSGL-GTF-------GAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIAT 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 257 IIGIPLVTACYILMNVSYFTVMTATELLQSQ-----AVAVTFGDRvlypASWIVPLFVAFSTIGAANGTCFTAGRLIYVA 331
Cdd:PRK10644 229 IGGVLIAAVCYVLSSTAIMGMIPNAALRVSAspfgdAARMALGDT----AGAIVSFCAAAGCLGSLGGWTLLAGQTAKAA 304

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 332 GREGHMLKVLSYISvRRLTPAPAIIFYGIIATIYIIP----------GDINSLVNYFSFAAWLFYGLTILGLIvmrftrk 401
Cdd:PRK10644 305 ADDGLFPPIFARVN-KAGTPVAGLLIVGVLMTIFQLSsispnaskefGLVSSVSVIFTLVPYLYTCAALLLLG------- 376

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 339895881 402 elERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVLFILSGLLFYFLFVHYKFGWAQKISKPITMH 472
Cdd:PRK10644 377 --HGHFGKARPAYLAVTLIAFVYCIWAVVGSGAKEVMWSFVTLMVITAFYALNYNRLHKNPYPLDAPISKD 445
potE PRK10655
putrescine transporter; Provisional
 45-423 4.70e-07

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 51.95  E-value: 4.70e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  45 GSGIFVSPksvlSNTEAVGPCLII-WAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWA---SLiVI 120
Cdd:PRK10655  23 GSGIIMLP----TKLAQVGTISILsWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTygvSL-LI 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 121 KPTSFAIICLSfseYVCAPFYVGCKPPQIvvkCLAAAAILFISTV-----NSLSVRLGSyvqniFTAAKLVI--VAIIII 193
Cdd:PRK10655  98 ANVAIAISAVG---YGTELFGATLSPVQI---CLATIGVLWLCTVanfggARITGQISS-----VTVWGVIIpvVGLSII 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 194 -----SGLVLLAQGNTKNFDnSFEGAQLSvgaISLAfyngLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYI 268
Cdd:PRK10655 167 gwfwfSPSLYVAAWNPHHLP-FFSAVGSS---IAMT----LWAFLGLESACANSDAVENPERNVPIAVLGGTLGAAVIYI 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 269 LMNVSYFTVMTATELLQSQA-----VAVTFGDRVlypASWIVPLFVaFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSY 343
Cdd:PRK10655 239 VSTNVIAGIVPNMELANSTApfglaFAQMFNPTV---GKIVMALMV-MSCCGSLLGWQFTIAQVFKSSADEGYFPKIFSR 314

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 344 ISvRRLTPAPAIIFYGIIATIY----IIPG---DINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVL 416
Cdd:PRK10655 315 VT-KVDAPVQGMLIIVVIQSLLslmtISPSlnsQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFIAFV 393


                 ....*..
gi 339895881 417 MTLISVF 423
Cdd:PRK10655 394 GALYSFY 400
PRK10249 PRK10249
phenylalanine transporter; Provisional
 38-367 7.61e-07

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 51.53  E-value: 7.61e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  38 IIVGTIIGSGIFVSPKSVLsntEAVGPCLIIwaACGVLATLGALCFAELGTMITK---SGGEYPYLMEAYGPIPAYLFSW 114
Cdd:PRK10249  31 IALGGAIGTGLFLGIGPAI---QMAGPAVLL--GYGVAGIIAFLIMRQLGEMVVEepvSGSFAHFAYKYWGPFAGFLSGW 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 115 ASLIVIkptsfaiICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIIS 194
Cdd:PRK10249 106 NYWVMF-------VLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGF 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 195 GLVLLAQGN---TKNFDNSFE-GAQLSVG--AISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYI 268
Cdd:PRK10249 179 GLWLLFSGHggeKASIDNLWRyGGFFATGwnGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYI 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 269 LMNVSYFTVMTATELLQ-SQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISvR 347
Cdd:PRK10249 259 GSLVVLLALYPWVEVKSnSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS-R 337

                        330       340
                 ....*....|....*....|
gi 339895881 348 RLTPAPAIIFYGIIATIYII 367
Cdd:PRK10249 338 RGVPINSLMLSGAITSLVVL 357
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 38-362 2.13e-05

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 46.89  E-value: 2.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   38 IIVGTIIGSGIFVSPKSVLSNTEAVGpCLIIWAACGVLATLGALCFAELGTMITKSGGEYP-----YLMEAYGPIPA--Y 110
Cdd:TIGR00913  12 IALGGTIGTGLLVGSGTALATGGPAG-LLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFAtyasrFVDPAFGFAVGwnY 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  111 LFSWAslivikptsfaiiCLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAI 190
Cdd:TIGR00913  91 WLQWL-------------IVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIG 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  191 IIISGLVLLAQG-------NTKNFDNSFEGAQLSVGAISLAFYNGL----WAYDGWNQLNYITEELRNPYRNLPLAI--- 256
Cdd:TIGR00913 158 FIILSIILNCGGgpnhgyiGFRYWHDPGAFAGGTIGGRFKGVCSVFvtaaFSFGGTELVALTAGEAANPRKSIPRAAkrt 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  257 ---IIGIPLVTACYILMNVSYftvmTATELLQSQAVAVT-----------FGDRVLypaSWIVPLFVAFSTIGAANGTCF 322
Cdd:TIGR00913 238 fwrILVFYILTLFLIGFLVPY----NDPRLLSSSSSSDSaaspfviaiqnHGIKVL---PHIFNAVILISVLSAANSSLY 310

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 339895881  323 TAGRLIYVAGREGHMLKVLSYISvRRLTPAPAIIF---YGIIA 362
Cdd:TIGR00913 311 ASSRTLYALAHQGLAPKIFAYVD-RRGVPYVAVIVsslFGLLA 352
cadB PRK10435
cadaverine/lysine antiporter;
28-324 1.24e-04

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 44.36  E-value: 1.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  28 KELGLISGISIIVGTIIGSGIFVSPksvlSNTEAVGPCLII-WAACGVLATLGALCFAELGTMITKSGGEYPYLME---A 103
Cdd:PRK10435   5 KKIGLFACTGVVAGNMMGSGIALLP----ANLASIGSIAIWgWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGEispA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 104 YGPIPAYLFSWASLIvikptSFAIICLSFSEYVCAPFYVGCKPpqiVVKCLAAAAILFIST-VNSLSvrlGSYVQNIFTA 182
Cdd:PRK10435  81 FGFQTGVLYYHANWI-----GNLAIGITAVSYLSTFFPVLNDP---IPAGIACIAIVWVFTfVNMLG---GTWVSRLTTI 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 183 AKLVIVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVG-AISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIP 261
Cdd:PRK10435 150 GLVLVLIPVVGTAIVGWHWFDAATYAANWNTSDTTDGhAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTG 229

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 339895881 262 LVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLypASWIVPLFVAFSTIGaangtCFTA 324
Cdd:PRK10435 230 LAGIIYIAATQVISGMFPASVMAASGAPFAISASTIL--GNWAAPLVSAFTAFA-----CLTS 285
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 63-364 5.96e-04

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 42.43  E-value: 5.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881   63 GPCLIIWaaCGVLATLGALC----FAELGTMITKSGGEYPYLM----EAYGPIPAYLFSWASLI----VIKPTSFAIICL 130
Cdd:TIGR00907  45 GAMSIVW--GWIIAGAGSICialsLAELSSAYPTSGGQYFWSAklapPRQMPFASWMTGWFNLAgqvaGTASTDLSVAQL 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  131 SFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYV-QNIFTAAKLVIVAIIIIsglvLLAQGNTK---- 205
Cdd:TIGR00907 123 ILGIVSLTTPGREYIPTRWHIFGIMIGIHLIHALINSLPTKWLPRItSSAAYWSLLGFLTICIT----LLACKSPKfndg 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  206 -----NFDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAII--IGIPLVTA-CYILmnVSYFTV 277
Cdd:TIGR00907 199 kfvftNFNNSTGGWKPGGFAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIgaVAIGIVTGfCFNI--VLFFSM 276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  278 MTATELLQS---QAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAG-RLIYVAGREGHM--LKVLSYISVRRLTP 351
Cdd:TIGR00907 277 GDIDSLISSttgQPIAQIFYNALGNKAGAIFLLCLILVTSFFCAITCMTANsRMIYAFSRDGGLpfSPLWSRVNPRTQVP 356

                         330
                  ....*....|...
gi 339895881  352 APAIIFYGIIATI 364
Cdd:TIGR00907 357 LNAVWLSAVWIIL 369
PRK11021 PRK11021
putative transporter; Provisional
 30-367 7.67e-04

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 41.82  E-value: 7.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881  30 LGLISGISIIVGTIIGSGIFVSPKsvLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPA 109
Cdd:PRK11021   1 LGLWQGIGLLSTSLLGTGVFAVPA--LAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLG 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 110 YLFSWASLIVIKPTSFAIICLSFSeYVCAPFYVGCKPpQIVVKCLAAAAILFistVNSLSVRLGSYVQNIFTAAKLVIVA 189
Cdd:PRK11021  79 RVTGWLFLSVIPVGLPAALQIAAG-FGQALFGWSSWQ-LLLAELLTLALLWL---LNLRGASSSANLQTVIALLIVALVV 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 190 IIIISGLVLLAQGNTKNFdNSFEGAQLsVGAISLAFynglWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYIL 269
Cdd:PRK11021 154 AIWWAGDIKPADIPFPAP-GSIEWSGL-FAALGVMF----WCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWA 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 270 MNVSYFTVMTATELLQSQA-----VAVTFGDRvlypASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYI 344
Cdd:PRK11021 228 CTVVVLHFPAYGDKQAAAAslpgiFVQLFGGY----ALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYLARL 303

                        330       340
                 ....*....|....*....|...
gi 339895881 345 SVRRLtPAPAIIFYGIIATIYII 367
Cdd:PRK11021 304 SARGV-PVNALNAVLGCCAVSIL 325
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 155-403 1.60e-03

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 40.87  E-value: 1.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 155 AAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLA------QGNTKNFDNSF-EGAQLSVGAISL--AF 225
Cdd:PRK11049 138 SLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVVGLVMVAmhfqspTGVEASFAHLWnDGGMFPKGLSGFfaGF 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 226 YNGLWAYDGWNQLNYITEELRNPYRNLPLAiIIGIPL-VTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWI 304
Cdd:PRK11049 218 QIAVFAFVGIELVGTTAAETKDPEKSLPRA-INSIPIrIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAAS 296

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 339895881 305 VPLFVAF-STIGAANGTCFTAGRLIYVAGREGHMLKVLSYISvRRLTPAPAIIFYGI-----IATIYIIPGDINSLVNYF 378
Cdd:PRK11049 297 VINFVVLtSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLS-KRAVPAKGLTFSCIcllggVVLLYVNPSVIGAFTLVT 375

                        250       260
                 ....*....|....*....|....*...
gi 339895881 379 SFAAWLF---YGLTILGLIVMRFTRKEL 403
Cdd:PRK11049 376 TVSAILFmfvWTIILCSYLVYRKQRPHL 403
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH