|
Name |
Accession |
Description |
Interval |
E-value |
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
7-396 |
8.34e-77 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 244.28 E-value: 8.34e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 7 KYIILGGGVSAGYAAKEFANQGVQpGELAVISKEAVAPYERPALSKGYLFPEGAARLPgfhccvgsggekLLPES-YKQK 85
Cdd:COG1251 3 RIVIIGAGMAGVRAAEELRKLDPD-GEITVIGAEPHPPYNRPPLSKVLAGETDEEDLL------------LRPADfYEEN 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 86 GIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLtdfGVKGADSKNILYLREIDDADKLVEAIKAKKggk 165
Cdd:COG1251 70 GIDLRLGTRVTAIDRAARTVTLADGETLPYDKLVLATGSRPRVP---PIPGADLPGVFTLRTLDDADALRAALAPGKrvv 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 166 avvvgggYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAqpNGEVKEVQLK 245
Cdd:COG1251 147 v--igggLIGLEAAAALRKRGLEVTVVERAPRLLPRQLDEEAGALLQRLLEALGVEVRLGTGVTEIEG--DDRVTGVRLA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 246 DGRTLEADIVIVGVGAKPLTSLFKG---QVEedkGGIKTDAFFKTSVPDVYAVGDVATFPLKMYGDvRRVEHVDHSRKSA 322
Cdd:COG1251 223 DGEELPADLVVVAIGVRPNTELARAaglAVD---RGIVVDDYLRTSDPDIYAAGDCAEHPGPVYGR-RVLELVAPAYEQA 298
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15231702 323 EQAVKAIKaaegGAAVEEYDYLPFFYSRSFDLSWQFYGDNVGD--SVLFGDSnpsnPKPRFGAYWVQGGKVVGAFM 396
Cdd:COG1251 299 RVAAANLA----GGPAAYEGSVPSTKLKVFGVDVASAGDAEGDeeVVVRGDP----ARGVYKKLVLRDGRLVGAVL 366
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
32-361 |
3.13e-55 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 185.79 E-value: 3.13e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 32 GELAVISKEAVAPYERPALSkgYLFPEGAARLpgfhccvgsggEKLL---PESYKQKGIELILSTEIVKADLSAKSLVSA 108
Cdd:COG0446 6 AEITVIEKGPHHSYQPCGLP--YYVGGGIKDP-----------EDLLvrtPESFERKGIDVRTGTEVTAIDPEAKTVTLR 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 109 TGDVFKYQTLIIATGSTVLRLtdfGVKGADSKNILYLREIDDADKLVEAIKAKKGGKAVVVGGGYIGLELSAVLRINNLD 188
Cdd:COG0446 73 DGETLSYDKLVLATGARPRPP---PIPGLDLPGVFTLRTLDDADALREALKEFKGKRAVVIGGGPIGLELAEALRKRGLK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 189 VTMVFPEPWCMPRlFTADIAAFYETYYTNKGVKIIKGTVASGFTAQpngEVKEVQLKDGRTLEADIVIVGVGAKPLTSLF 268
Cdd:COG0446 150 VTLVERAPRLLGV-LDPEMAALLEEELREHGVELRLGETVVAIDGD---DKVAVTLTDGEEIPADLVVVAPGVRPNTELA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 269 KG-QVEEDK-GGIKTDAFFKTSVPDVYAVGDVATFPLKMYGDVRRVEHVDHSRKSAEQAVKAIKaaeGGAAveEYDYLPF 346
Cdd:COG0446 226 KDaGLALGErGWIKVDETLQTSDPDVYAAGDCAEVPHPVTGKTVYIPLASAANKQGRVAAENIL---GGPA--PFPGLGT 300
|
330
....*....|....*
gi 15231702 347 FYSRSFDLSWQFYGD 361
Cdd:COG0446 301 FISKVFDLCIASTGT 315
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
6-322 |
4.33e-46 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 161.33 E-value: 4.33e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 6 FKYIILGGGVsAGYAAKEFANQgvQPGELAVISKEAVAPYERPALSKGYLFPEGAARLPGFHCCVGSGGEKLLPESykQK 85
Cdd:pfam07992 1 YDVVVIGGGP-AGLAAALTLAQ--LGGKVTLIEDEGTCPYGGCVLSKALLGAAEAPEIASLWADLYKRKEEVVKKL--NN 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 86 GIELILSTEIVKAD-----LSAKSLVSATGDVFKYQTLIIATGSTVLRLtdfGVKGADSKNILYLREIDDADKLVEAIKA 160
Cdd:pfam07992 76 GIEVLLGTEVVSIDpgakkVVLEELVDGDGETITYDRLVIATGARPRLP---PIPGVELNVGFLVRTLDSAEALRLKLLP 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 161 KKGGKAVVVgggYIGLELSAVLRINNLDVTMVFPEPWcMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTaqPNGEVK 240
Cdd:pfam07992 153 KRVVVVGGG---YIGVELAAALAKLGKEVTLIEALDR-LLRAFDEEISAALEKALEKNGVEVRLGTSVKEII--GDGDGV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 241 EVQLKDGRTLEADIVIVGVGAKPLTSLFK-GQVEEDK-GGIKTDAFFKTSVPDVYAVGDVatfplkmygDVRRVEHVDHS 318
Cdd:pfam07992 227 EVILKDGTEIDADLVVVAIGRRPNTELLEaAGLELDErGGIVVDEYLRTSVPGIYAAGDC---------RVGGPELAQNA 297
|
....
gi 15231702 319 RKSA 322
Cdd:pfam07992 298 VAQG 301
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
1-394 |
1.20e-30 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 121.96 E-value: 1.20e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 1 MAEKSFkyIILGGGVSAGYAAKEFANQGVQpGELAVISKEAVAPYERPALSKGYLF-PEGAARlpgfhccvgsggeKLLP 79
Cdd:PRK09754 1 MKEKTI--IIVGGGQAAAMAAASLRQQGFT-GELHLFSDERHLPYERPPLSKSMLLeDSPQLQ-------------QVLP 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 80 ES-YKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTDFGVKGadsKNILYLREIDDADKLVEAI 158
Cdd:PRK09754 65 ANwWQENNVHLHSGVTIKTLGRDTRELVLTNGESWHWDQLFIATGAAARPLPLLDALG---ERCFTLRHAGDAARLREVL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 159 KAKKGGKAVVVGGgyIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTvasGFTAQPNGE 238
Cdd:PRK09754 142 QPERSVVIVGAGT--IGLELAASATQRRCKVTVIELAATVMGRNAPPPVQRYLLQRHQQAGVRILLNN---AIEHVVDGE 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 239 VKEVQLKDGRTLEADIVIVGVGAKpltslFKGQVEED-----KGGIKTDAFFKTSVPDVYAVGDVATFPLKMyGDVRRVE 313
Cdd:PRK09754 217 KVELTLQSGETLQADVVIYGIGIS-----ANDQLAREanldtANGIVIDEACRTCDPAIFAGGDVAITRLDN-GALHRCE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 314 HVDHSRKSAEQAVKAIKAAE---GGAaveeydylPFFYSRSFDLSWQFYGDNVGDSVLFgDSNPSNPKprfgAYWV--QG 388
Cdd:PRK09754 291 SWENANNQAQIAAAAMLGLPlplLPP--------PWFWSDQYSDNLQFIGDMRGDDWLC-RGNPETQK----AIWFnlQN 357
|
....*.
gi 15231702 389 GKVVGA 394
Cdd:PRK09754 358 GVLIGA 363
|
|
| nitri_red_nirB |
TIGR02374 |
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen ... |
82-372 |
6.21e-22 |
|
nitrite reductase [NAD(P)H], large subunit; [Central intermediary metabolism, Nitrogen metabolism]
Pssm-ID: 162827 [Multi-domain] Cd Length: 785 Bit Score: 98.75 E-value: 6.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 82 YKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTdfgVKGADSKNILYLREIDDADKLVEAikAK 161
Cdd:TIGR02374 64 YEKHGITLYTGETVIQIDTDQKQVITDAGRTLSYDKLILATGSYPFILP---IPGADKKGVYVFRTIEDLDAIMAM--AQ 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 162 KGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKII--KGTVASgftaQPNGEV 239
Cdd:TIGR02374 139 RFKKAAVIGGGLLGLEAAVGLQNLGMDVSVIHHAPGLMAKQLDQTAGRLLQRELEQKGLTFLleKDTVEI----VGATKA 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 240 KEVQLKDGRTLEADIVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVATFPLKMYGDVR--------R 311
Cdd:TIGR02374 215 DRIRFKDGSSLEADLIVMAAGIRPNDELAVSAGIKVNRGIIVNDSMQTSDPDIYAVGECAEHNGRVYGLVAplyeqakvL 294
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 15231702 312 VEHV-DHSRKSAEQAVKAIK---------------AAEGGAAVEEYDYLPFFYSRSFdlswqFYGDNVGDSVLFGDS 372
Cdd:TIGR02374 295 ADHIcGVECEEYEGSDLSAKlkllgvdvwsagdaqETERTTSIKIYDEQKGIYKKLV-----LSDDKLLGAVLFGDT 366
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
9-343 |
7.14e-22 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 96.74 E-value: 7.14e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 9 IILGGGVsAG-YAAKEFANQGVQPGELAVISKEAVAPYeRPalskgyLFPE-GAARLPGFHCCVGsggeklLPESYKQKG 86
Cdd:COG1252 5 VIVGGGF-AGlEAARRLRKKLGGDAEVTLIDPNPYHLF-QP------LLPEvAAGTLSPDDIAIP------LRELLRRAG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 87 IELILStEIVKADLSAKSLVSATGDVFKYQTLIIATGStvlRLTDFGVKGADsKNILYLREIDDADKLVEAIKAKKGGKA 166
Cdd:COG1252 71 VRFIQG-EVTGIDPEARTVTLADGRTLSYDYLVIATGS---VTNFFGIPGLA-EHALPLKTLEDALALRERLLAAFERAE 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 167 VVVGGGYI-------GLELSAVL-------------RINNLDVTMVFPEPWCMPRlFTADIAAFYETYYTNKGVKIIKGT 226
Cdd:COG1252 146 RRRLLTIVvvgggptGVELAGELaellrkllrypgiDPDKVRITLVEAGPRILPG-LGEKLSEAAEKELEKRGVEVHTGT 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 227 VASGFTAqpngevKEVQLKDGRTLEADIVIV--GVGAKPLTSLFKGQVEEdKGGIKTDAFFKT-SVPDVYAVGDVATFPL 303
Cdd:COG1252 225 RVTEVDA------DGVTLEDGEEIPADTVIWaaGVKAPPLLADLGLPTDR-RGRVLVDPTLQVpGHPNVFAIGDCAAVPD 297
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 15231702 304 KMYGDVRRVEHvdHSRKSAEQAVKAIKAAEGGAAVEEYDY 343
Cdd:COG1252 298 PDGKPVPKTAQ--AAVQQAKVLAKNIAALLRGKPLKPFRY 335
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
79-300 |
1.29e-19 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 90.48 E-value: 1.29e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 79 PESYKQKGIELILSTEIVKADLSAKSLV---SATGDVF--KYQTLIIATGStvlRLTDFGVKGADSKNILYLREIDDADK 153
Cdd:PRK09564 63 PEEFIKSGIDVKTEHEVVKVDAKNKTITvknLKTGSIFndTYDKLMIATGA---RPIIPPIKNINLENVYTLKSMEDGLA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 154 LVEAIKAKKGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTA 233
Cdd:PRK09564 140 LKELLKDEEIKNIVIIGAGFIGLEAVEAAKHLGKNVRIIQLEDRILPDSFDKEITDVMEEELRENGVELHLNEFVKSLIG 219
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15231702 234 qpNGEVKEVqLKDGRTLEADIVIVGVGAKPLTSLFKGQVEE--DKGGIKTDAFFKTSVPDVYAVGDVAT 300
Cdd:PRK09564 220 --EDKVEGV-VTDKGEYEADVVIVATGVKPNTEFLEDTGLKtlKNGAIIVDEYGETSIENIYAAGDCAT 285
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
3-302 |
7.43e-18 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 85.14 E-value: 7.43e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 3 EKSFKYIILGGGvSAGYAAkefANQGVQPG-ELAVIskeavapyERPAL-----------SKGYLFP----EGAARLPGF 66
Cdd:COG1249 1 MKDYDLVVIGAG-PGGYVA---AIRAAQLGlKVALV--------EKGRLggtclnvgcipSKALLHAaevaHEARHAAEF 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 67 HCCVGSGG-----------------EKLLPESYKQKGIELILST-EIVkadlSAKSLVSATGDVFKYQTLIIATGSTVLR 128
Cdd:COG1249 69 GISAGAPSvdwaalmarkdkvvdrlRGGVEELLKKNGVDVIRGRaRFV----DPHTVEVTGGETLTADHIVIATGSRPRV 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 129 LTDFGVKGA---DSKNILYLREIddADKLVeaikakkggkavvvgggYIGLELSAVLRinNL--DVTMVfpEPwcMPRL- 202
Cdd:COG1249 145 PPIPGLDEVrvlTSDEALELEEL--PKSLVvig------------ggYIGLEFAQIFA--RLgsEVTLV--ER--GDRLl 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 203 --FTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGevKEVQLKDGR---TLEADIVIVGVGAKPLTSLF---KGQVE- 273
Cdd:COG1249 205 pgEDPEISEALEKALEKEGIDILTGAKVTSVEKTGDG--VTVTLEDGGgeeAVEADKVLVATGRRPNTDGLgleAAGVEl 282
|
330 340
....*....|....*....|....*....
gi 15231702 274 EDKGGIKTDAFFKTSVPDVYAVGDVATFP 302
Cdd:COG1249 283 DERGGIKVDEYLRTSVPGIYAIGDVTGGP 311
|
|
| lipoamide_DH |
TIGR01350 |
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ... |
82-298 |
7.32e-15 |
|
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Pssm-ID: 273568 [Multi-domain] Cd Length: 460 Bit Score: 76.14 E-value: 7.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 82 YKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLT-DFGVKGA---DSKNILYLREIddADKLVea 157
Cdd:TIGR01350 99 LKKNKVTVIKGEAKFLDPGTVSVTGENGEETLEAKNIIIATGSRPRSLPgPFDFDGKvviTSTGALNLEEV--PESLV-- 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 158 ikakkggkavVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPrLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNG 237
Cdd:TIGR01350 175 ----------IIGGGVIGIEFASIFASLGSKVTVIEMLDRILP-GEDAEVSKVLQKALKKKGVKILTNTKVTAVEKNDDQ 243
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15231702 238 EVKEVQLKDGRTLEADIVIVGVGAKPLTS---LFKGQVEEDK-GGIKTDAFFKTSVPDVYAVGDV 298
Cdd:TIGR01350 244 VTYENKGGETETLTGEKVLVAVGRKPNTEglgLEKLGVELDErGRIVVDEYMRTNVPGIYAIGDV 308
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
110-299 |
5.20e-14 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 73.64 E-value: 5.20e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 110 GDVFKYQTLIIATGSTVLRLTDFGVKG---ADSKNILYLREIddADKLVeaikakkggkavVVGGGYIGLELSAVLRinN 186
Cdd:PRK06416 130 EQTYTAKNIILATGSRPRELPGIEIDGrviWTSDEALNLDEV--PKSLV------------VIGGGYIGVEFASAYA--S 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 187 L--DVTMVfpEpwCMPRL---FTADIAAFYETYYTNKGVKIIKGTVASGftAQPNGEVKEVQLKDG---RTLEADIVIVG 258
Cdd:PRK06416 194 LgaEVTIV--E--ALPRIlpgEDKEISKLAERALKKRGIKIKTGAKAKK--VEQTDDGVTVTLEDGgkeETLEADYVLVA 267
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 15231702 259 VGAKPLTS---LFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVA 299
Cdd:PRK06416 268 VGRRPNTEnlgLEELGVKTDRGFIEVDEQLRTNVPNIYAIGDIV 311
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
217-344 |
6.42e-14 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 72.07 E-value: 6.42e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 217 NKGVKIIKGTVASGFTAqpNGEVKEVQLKDGRT-----LEADIVIVGVGAKPLTSLFKGQVEE--DKGGIKTDAFFKTSV 289
Cdd:COG0492 189 NPKIEVLWNTEVTEIEG--DGRVEGVTLKNVKTgeekeLEVDGVFVAIGLKPNTELLKGLGLEldEDGYIVVDEDMETSV 266
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 15231702 290 PDVYAVGDVATFPLKmygdvrrvehvdhsrksaeQAVKAikAAEGG-AAVEEYDYL 344
Cdd:COG0492 267 PGVFAAGDVRDYKYR-------------------QAATA--AGEGAiAALSAARYL 301
|
|
| PRK13512 |
PRK13512 |
coenzyme A disulfide reductase; Provisional |
79-300 |
1.31e-12 |
|
coenzyme A disulfide reductase; Provisional
Pssm-ID: 184103 [Multi-domain] Cd Length: 438 Bit Score: 69.04 E-value: 1.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 79 PESYKQ-KGIELILSTEIVKADLSAKSLV---SATGDVFK--YQTLIIATGSTVLRLtdfgvkGADSKNILYLREIDDAD 152
Cdd:PRK13512 64 PEKFYDrKQITVKTYHEVIAINDERQTVTvlnRKTNEQFEesYDKLILSPGASANSL------GFESDITFTLRNLEDTD 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 153 KLVEAIKAKKGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWcMPRLFTADI--AAFYE------TYYTNKGVKIIK 224
Cdd:PRK13512 138 AIDQFIKANQVDKALVVGAGYISLEVLENLYERGLHPTLIHRSDK-INKLMDADMnqPILDEldkreiPYRLNEEIDAIN 216
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 15231702 225 GtvasgftaqpngevKEVQLKDGRTLEADIVIVGVGAKPLTSLFKGQ--VEEDKGGIKTDAFFKTSVPDVYAVGDVAT 300
Cdd:PRK13512 217 G--------------NEVTFKSGKVEHYDMIIEGVGTHPNSKFIESSniKLDDKGFIPVNDKFETNVPNIYAIGDIIT 280
|
|
| PRK06116 |
PRK06116 |
glutathione reductase; Validated |
173-298 |
1.47e-12 |
|
glutathione reductase; Validated
Pssm-ID: 235701 [Multi-domain] Cd Length: 450 Bit Score: 69.03 E-value: 1.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDVTMVF--PEPWcmpRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVKeVQLKDGRTL 250
Cdd:PRK06116 177 YIAVEFAGVLNGLGSETHLFVrgDAPL---RGFDPDIRETLVEEMEKKGIRLHTNAVPKAVEKNADGSLT-LTLEDGETL 252
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 15231702 251 EADIVIVGVGAKPLTS---LFKGQVE-EDKGGIKTDAFFKTSVPDVYAVGDV 298
Cdd:PRK06116 253 TVDCLIWAIGREPNTDglgLENAGVKlNEKGYIIVDEYQNTNVPGIYAVGDV 304
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
174-299 |
2.64e-11 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 64.94 E-value: 2.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 174 IGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVkeVQLKDGRTLEAD 253
Cdd:PRK04965 152 IGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIR--ATLDSGRSIEVD 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 15231702 254 IVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDVA 299
Cdd:PRK04965 230 AVIAAAGLRPNTALARRAGLAVNRGIVVDSYLQTSAPDIYALGDCA 275
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
116-303 |
2.54e-10 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 62.12 E-value: 2.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 116 QTLIIATGSTVLRLTdfGVKGADSKNILYLREIDDADKLVE--AIKAKKggkavvvgggYIGLELSAVLRINNLDVTM-- 191
Cdd:PRK06292 132 KNIVIATGSRVPPIP--GVWLILGDRLLTSDDAFELDKLPKslAVIGGG----------VIGLELGQALSRLGVKVTVfe 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 192 ----VFPepwcmprLFTADIAAFYETYYtNKGVKIIKGTVASGFTaQPNGEVKEVQLKDG--RTLEADIVIVGVGAKPLT 265
Cdd:PRK06292 200 rgdrILP-------LEDPEVSKQAQKIL-SKEFKIKLGAKVTSVE-KSGDEKVEELEKGGktETIEADYVLVATGRRPNT 270
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 15231702 266 ---SLFKGQVEEDKGG-IKTDAFFKTSVPDVYAVGDVATFPL 303
Cdd:PRK06292 271 dglGLENTGIELDERGrPVVDEHTQTSVPGIYAAGDVNGKPP 312
|
|
| trypano_reduc |
TIGR01423 |
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of ... |
216-298 |
5.27e-09 |
|
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Pssm-ID: 200098 [Multi-domain] Cd Length: 486 Bit Score: 58.06 E-value: 5.27e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 216 TNKGVKIIKGTVASGFTAQPNGEvKEVQLKDGRTLEADIVIVGVGAKPLTS---LFKGQVE-EDKGGIKTDAFFKTSVPD 291
Cdd:TIGR01423 242 RANGINIMTNENPAKVTLNADGS-KHVTFESGKTLDVDVVMMAIGRVPRTQtlqLDKVGVElTKKGAIQVDEFSRTNVPN 320
|
....*..
gi 15231702 292 VYAVGDV 298
Cdd:TIGR01423 321 IYAIGDV 327
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
173-298 |
1.56e-08 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 56.36 E-value: 1.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDVTMVFPEPWCMPRlFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVKEVQLKDGR-TLE 251
Cdd:PRK06370 181 YIGLEFAQMFRRFGSEVTVIERGPRLLPR-EDEDVAAAVREILEREGIDVRLNAECIRVERDGDGIAVGLDCNGGApEIT 259
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 15231702 252 ADIVIVGVGAKPLTS---LFKGQVEEDK-GGIKTDAFFKTSVPDVYAVGDV 298
Cdd:PRK06370 260 GSHILVAVGRVPNTDdlgLEAAGVETDArGYIKVDDQLRTTNPGIYAAGDC 310
|
|
| PRK07845 |
PRK07845 |
flavoprotein disulfide reductase; Reviewed |
205-303 |
1.69e-08 |
|
flavoprotein disulfide reductase; Reviewed
Pssm-ID: 236112 [Multi-domain] Cd Length: 466 Bit Score: 56.41 E-value: 1.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 205 ADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVkeVQLKDGRTLEADIVIVGVGAKPLTS---LFKGQVEEDKGG-IK 280
Cdd:PRK07845 218 ADAAEVLEEVFARRGMTVLKRSRAESVERTGDGVV--VTLTDGRTVEGSHALMAVGSVPNTAglgLEEAGVELTPSGhIT 295
|
90 100
....*....|....*....|....
gi 15231702 281 TDAFFKTSVPDVYAVGDV-ATFPL 303
Cdd:PRK07845 296 VDRVSRTSVPGIYAAGDCtGVLPL 319
|
|
| PRK14989 |
PRK14989 |
nitrite reductase subunit NirD; Provisional |
82-309 |
1.86e-08 |
|
nitrite reductase subunit NirD; Provisional
Pssm-ID: 184951 [Multi-domain] Cd Length: 847 Bit Score: 56.67 E-value: 1.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 82 YKQKGIELILSTEIVKADLSAKSLVSATGDVFKYQTLIIATGSTVLRLTdfgVKGADSKNILYLREIDDAdKLVEAiKAK 161
Cdd:PRK14989 69 YEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPP---IKGSETQDCFVYRTIEDL-NAIEA-CAR 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 162 KGGKAVVVGGGYIGLELSAVLRINNLDVTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVKE 241
Cdd:PRK14989 144 RSKRGAVVGGGLLGLEAAGALKNLGVETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKT 223
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 15231702 242 VQLKDGRTLEADIVIVGVGAKPLTSLFKgQVEED---KGGIKTDAFFKTSVPDVYAVGDVATFPLKMYGDV 309
Cdd:PRK14989 224 MRFADGSELEVDFIVFSTGIRPQDKLAT-QCGLAvapRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLV 293
|
|
| PRK07846 |
PRK07846 |
mycothione reductase; Reviewed |
173-304 |
2.30e-08 |
|
mycothione reductase; Reviewed
Pssm-ID: 181142 [Multi-domain] Cd Length: 451 Bit Score: 55.73 E-value: 2.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDVTMVFPEPwCMPRLFTADIAAFYeTYYTNKGVKIIKGTVASGFTAQPNGevKEVQLKDGRTLEA 252
Cdd:PRK07846 176 FIAAEFAHVFSALGVRVTVVNRSG-RLLRHLDDDISERF-TELASKRWDVRLGRNVVGVSQDGSG--VTLRLDDGSTVEA 251
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 15231702 253 DIVIVGVGAKP---LTSLFKGQVEEDKGG-IKTDAFFKTSVPDVYAVGDVAT-FPLK 304
Cdd:PRK07846 252 DVLLVATGRVPngdLLDAAAAGVDVDEDGrVVVDEYQRTSAEGVFALGDVSSpYQLK 308
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
174-303 |
1.41e-07 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 53.39 E-value: 1.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 174 IGLELSAVLRINNLDVTMVfpEpwCMPRLFTA---DIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVKEVQLKDG--R 248
Cdd:PRK06327 194 IGLELGSVWRRLGAEVTIL--E--ALPAFLAAadeQVAKEAAKAFTKQGLDIHLGVKIGEIKTGGKGVSVAYTDADGeaQ 269
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 15231702 249 TLEADIVIVGVGAKPLTSLFK----GQVEEDKGGIKTDAFFKTSVPDVYAVGDVATFPL 303
Cdd:PRK06327 270 TLEVDKLIVSIGRVPNTDGLGleavGLKLDERGFIPVDDHCRTNVPNVYAIGDVVRGPM 328
|
|
| PRK05249 |
PRK05249 |
Si-specific NAD(P)(+) transhydrogenase; |
216-302 |
2.96e-07 |
|
Si-specific NAD(P)(+) transhydrogenase;
Pssm-ID: 235373 [Multi-domain] Cd Length: 461 Bit Score: 52.47 E-value: 2.96e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 216 TNKGVKIIKGTVASGFTAQPNGEVkeVQLKDGRTLEADIVIVGVGAKpltslfkGQVEE-----------DKGGIKTDAF 284
Cdd:PRK05249 227 RDSGVTIRHNEEVEKVEGGDDGVI--VHLKSGKKIKADCLLYANGRT-------GNTDGlnlenagleadSRGQLKVNEN 297
|
90
....*....|....*...
gi 15231702 285 FKTSVPDVYAVGDVATFP 302
Cdd:PRK05249 298 YQTAVPHIYAVGDVIGFP 315
|
|
| PLN02507 |
PLN02507 |
glutathione reductase |
173-298 |
1.02e-06 |
|
glutathione reductase
Pssm-ID: 215281 [Multi-domain] Cd Length: 499 Bit Score: 50.97 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDVTMVFPEPwcMP-RLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGeVKeVQLKDGRTLE 251
Cdd:PLN02507 213 YIAVEFASIWRGMGATVDLFFRKE--LPlRGFDDEMRAVVARNLEGRGINLHPRTNLTQLTKTEGG-IK-VITDHGEEFV 288
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 15231702 252 ADIVIVGVGAKPLTS---LFKGQVEEDK-GGIKTDAFFKTSVPDVYAVGDV 298
Cdd:PLN02507 289 ADVVLFATGRAPNTKrlnLEAVGVELDKaGAVKVDEYSRTNIPSIWAIGDV 339
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
173-247 |
1.66e-06 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 45.66 E-value: 1.66e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 15231702 173 YIGLELSAVLRINNLDVTMVFPEPWCMPrLFTADIAAFYETYYTNKGVKIIKGTVASGFTAqpNGEVKEVQLKDG 247
Cdd:pfam00070 9 YIGLELAGALARLGSKVTVVERRDRLLP-GFDPEIAKILQEKLEKNGIEFLLNTTVEAIEG--NGDGVVVVLTDG 80
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
219-300 |
3.81e-06 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 48.98 E-value: 3.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 219 GVKIIKGTVASGFTAQPNGEVKEVQL---------KDGR-----------TLEADIVIVGVGAKPLTSLFKGQVE---ED 275
Cdd:COG0493 307 GVEFLFLVAPVEIIGDENGRVTGLECvrmelgepdESGRrrpvpiegsefTLPADLVILAIGQTPDPSGLEEELGlelDK 386
|
90 100
....*....|....*....|....*.
gi 15231702 276 KGGIKTDAF-FKTSVPDVYAVGDVAT 300
Cdd:COG0493 387 RGTIVVDEEtYQTSLPGVFAGGDAVR 412
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
248-333 |
7.65e-06 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 47.87 E-value: 7.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 248 RTLEADIVIVGVGAKPLTSLFKGQVE---EDKGGIKTD-AFFKTSVPDVYAVGDVATfplkmyGDVRRVEHVDHSRKSAE 323
Cdd:PRK11749 372 FTLPADLVIKAIGQTPNPLILSTTPGlelNRWGTIIADdETGRTSLPGVFAGGDIVT------GAATVVWAVGDGKDAAE 445
|
90
....*....|
gi 15231702 324 QAVKAIKAAE 333
Cdd:PRK11749 446 AIHEYLEGAA 455
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
248-304 |
8.26e-05 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 44.76 E-value: 8.26e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 15231702 248 RTLEADIVIVGVGAKPLTSLFKGQVEEDKGG-IKTDAFFKTSVPDVYAVGDVATFPLK 304
Cdd:PRK15317 434 HHLELEGVFVQIGLVPNTEWLKGTVELNRRGeIIVDARGATSVPGVFAAGDCTTVPYK 491
|
|
| PTZ00318 |
PTZ00318 |
NADH dehydrogenase-like protein; Provisional |
112-300 |
8.48e-05 |
|
NADH dehydrogenase-like protein; Provisional
Pssm-ID: 185553 [Multi-domain] Cd Length: 424 Bit Score: 44.76 E-value: 8.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 112 VFKYQTLIIATGStvlRLTDFGVKGADsKNILYLREIDDA----DKLVEAIKAKKGGKAVVVGGG-----------YIGL 176
Cdd:PTZ00318 111 SVPYDKLVVAHGA---RPNTFNIPGVE-ERAFFLKEVNHArgirKRIVQCIERASLPTTSVEERKrllhfvvvgggPTGV 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 177 ELSAVLriNNL---DVTMVFPE--PWCMPRLFTA--DIAAFYETYYTNKGVKIIKgtvASGFTAQPNGEVKEVQ-----L 244
Cdd:PTZ00318 187 EFAAEL--ADFfrdDVRNLNPElvEECKVTVLEAgsEVLGSFDQALRKYGQRRLR---RLGVDIRTKTAVKEVLdkevvL 261
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 245 KDGRTLEADIVI--VGVGAKPLTSLFKgqVEED-KGGIKTDAFFKTS-VPDVYAVGDVAT 300
Cdd:PTZ00318 262 KDGEVIPTGLVVwsTGVGPGPLTKQLK--VDKTsRGRISVDDHLRVKpIPNVFALGDCAA 319
|
|
| TGR |
TIGR01438 |
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member ... |
170-299 |
1.21e-04 |
|
thioredoxin and glutathione reductase selenoprotein; This homodimeric, FAD-containing member of the pyridine nucleotide disulfide oxidoreductase family contains a C-terminal motif Cys-SeCys-Gly, where SeCys is selenocysteine encoded by TGA (in some sequence reports interpreted as a stop codon). In some members of this subfamily, Cys-SeCys-Gly is replaced by Cys-Cys-Gly. The reach of the selenium atom at the C-term arm of the protein is proposed to allow broad substrate specificity.
Pssm-ID: 273624 [Multi-domain] Cd Length: 484 Bit Score: 44.07 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 170 GGGYIGLELSAVLRINNLDVT-MVFPEPWcmpRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQpnGEVKEVQLKD-- 246
Cdd:TIGR01438 187 GASYVALECAGFLAGIGLDVTvMVRSILL---RGFDQDCANKVGEHMEEHGVKFKRQFVPIKVEQI--EAKVLVEFTDst 261
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 15231702 247 -GRTLEADIVIVGVGAKPLTSLFK-----GQVEEDKGGIKTDAFFKTSVPDVYAVGDVA 299
Cdd:TIGR01438 262 nGIEEEYDTVLLAIGRDACTRKLNlenvgVKINKKTGKIPADEEEQTNVPYIYAVGDIL 320
|
|
| PRK07251 |
PRK07251 |
FAD-containing oxidoreductase; |
174-298 |
1.38e-04 |
|
FAD-containing oxidoreductase;
Pssm-ID: 180907 [Multi-domain] Cd Length: 438 Bit Score: 43.97 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 174 IGLELSAVLRINNLDVTMVFPEPWCMPRlFTADIAAFYETYYTNKGVKIIKGtvaSGFTAQPNGEVKEVQLKDGRTLEAD 253
Cdd:PRK07251 168 IGLEFAGLYNKLGSKVTVLDAASTILPR-EEPSVAALAKQYMEEDGITFLLN---AHTTEVKNDGDQVLVVTEDETYRFD 243
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 15231702 254 IVIVGVGAKPLTS---LFKGQVE-EDKGGIKTDAFFKTSVPDVYAVGDV 298
Cdd:PRK07251 244 ALLYATGRKPNTEplgLENTDIElTERGAIKVDDYCQTSVPGVFAVGDV 292
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
249-311 |
3.42e-04 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 43.19 E-value: 3.42e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 249 TLEADIVIVGVGAKP---LTSLFKGQVEEDKGGIKTDAFFKTSVPDVYAVGDV----ATFPLKMyGDVRR 311
Cdd:PRK12778 672 TVDVDLVIVSVGVSPnplVPSSIPGLELNRKGTIVVDEEMQSSIPGIYAGGDIvrggATVILAM-GDGKR 740
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
231-297 |
4.79e-04 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 42.46 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 231 FTAQP------NGEVK-----EVQLKDG---------RTLEADIVIVGVG-AKPLTSLFK-GQVEEDK-GGIK-TDAFFK 286
Cdd:PRK12810 348 FNVQTkefegeNGKVTgvkvvRTELGEGdfepvegseFVLPADLVLLAMGfTGPEAGLLAqFGVELDErGRVAaPDNAYQ 427
|
90
....*....|.
gi 15231702 287 TSVPDVYAVGD 297
Cdd:PRK12810 428 TSNPKVFAAGD 438
|
|
| PRK08010 |
PRK08010 |
pyridine nucleotide-disulfide oxidoreductase; Provisional |
173-298 |
8.92e-04 |
|
pyridine nucleotide-disulfide oxidoreductase; Provisional
Pssm-ID: 181196 [Multi-domain] Cd Length: 441 Bit Score: 41.54 E-value: 8.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDVTMVFPEPWCMPRLfTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGevKEVQLKDGRTLeA 252
Cdd:PRK08010 168 YIGVEFASMFANFGSKVTILEAASLFLPRE-DRDIADNIATILRDQGVDIILNAHVERISHHENQ--VQVHSEHAQLA-V 243
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 15231702 253 DIVIVGVGAKPLTSLFK----GQVEEDKGGIKTDAFFKTSVPDVYAVGDV 298
Cdd:PRK08010 244 DALLIASGRQPATASLHpenaGIAVNERGAIVVDKYLHTTADNIWAMGDV 293
|
|
| PTZ00058 |
PTZ00058 |
glutathione reductase; Provisional |
173-297 |
1.67e-03 |
|
glutathione reductase; Provisional
Pssm-ID: 185420 [Multi-domain] Cd Length: 561 Bit Score: 40.75 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDvTMVFPEPWCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTAQPNGEVKEVQLKDGRTLEA 252
Cdd:PTZ00058 247 YIAVELINVVNRLGAE-SYIFARGNRLLRKFDETIINELENDMKKNNINIITHANVEEIEKVKEKNLTIYLSDGRKYEHF 325
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 15231702 253 DIVIVGVGAKPLTSLFKGQ---VEEDKGGIKTDAFFKTSVPDVYAVGD 297
Cdd:PTZ00058 326 DYVIYCVGRSPNTEDLNLKalnIKTPKGYIKVDDNQRTSVKHIYAVGD 373
|
|
| Trp_halogenase |
pfam04820 |
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form ... |
208-256 |
1.92e-03 |
|
Tryptophan halogenase; Tryptophan halogenase catalyzes the chlorination of tryptophan to form 7-chlorotryptophan. This is the first step in the biosynthesis of pyrrolnitrin, an antibiotic with broad-spectrum anti-fungal activity. Tryptophan halogenase is NADH-dependent.
Pssm-ID: 398475 [Multi-domain] Cd Length: 457 Bit Score: 40.39 E-value: 1.92e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 15231702 208 AAFYETYYTNKGVKIIKGTVASGfTAQPNGEVKEVQLKDGRTLEADIVI 256
Cdd:pfam04820 160 ARFLRRNAEARGVTRVEGKVVDV-QLDADGFVTSLRLEDGREVEADLFI 207
|
|
| PTZ00052 |
PTZ00052 |
thioredoxin reductase; Provisional |
173-299 |
2.27e-03 |
|
thioredoxin reductase; Provisional
Pssm-ID: 185416 [Multi-domain] Cd Length: 499 Bit Score: 40.19 E-value: 2.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 173 YIGLELSAVLRINNLDVTMVFPEpwCMPRLFTADIAAFYETYYTNKGVKIIKGTVASGFTaQPNGEVKeVQLKDGRTLEA 252
Cdd:PTZ00052 192 YIGLETAGFLNELGFDVTVAVRS--IPLRGFDRQCSEKVVEYMKEQGTLFLEGVVPINIE-KMDDKIK-VLFSDGTTELF 267
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 15231702 253 DIVIVGVGAKPLTSLFKGQ---VEEDKGGIKTDAFFKTSVPDVYAVGDVA 299
Cdd:PTZ00052 268 DTVLYATGRKPDIKGLNLNaigVHVNKSNKIIAPNDCTNIPNIFAVGDVV 317
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
210-296 |
2.39e-03 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 40.23 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 15231702 210 FYETYYT---NKGVKIIKGTVASgFTAQPNGEVKeVQLKD---GRTLE--ADIVIVGVGAKP------LTSLFKGQVEED 275
Cdd:COG1148 352 KYEEFYRrarEDGVRFIRGRVAE-IEEDEGGKLV-VTVEDtllGEPVEieADLVVLATGMVPsedneeLAKLLKLPLDQD 429
|
90 100
....*....|....*....|....*.
gi 15231702 276 kgGIKTDAFFK-----TSVPDVYAVG 296
Cdd:COG1148 430 --GFFLEAHPKlrpveTATDGIFLAG 453
|
|
| PRK10262 |
PRK10262 |
thioredoxin reductase; Provisional |
239-298 |
3.00e-03 |
|
thioredoxin reductase; Provisional
Pssm-ID: 182343 [Multi-domain] Cd Length: 321 Bit Score: 39.66 E-value: 3.00e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 15231702 239 VKEVQLKDG-RTLEADIVIVGVGAKPLTSLFKGQVEEDKGGIKTDAFF-----KTSVPDVYAVGDV 298
Cdd:PRK10262 223 LRDTQNSDNiESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIhgnatQTSIPGVFAAGDV 288
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
245-302 |
8.72e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 38.59 E-value: 8.72e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 15231702 245 KDGRTLEADIVIVGVGAKPLTSLF----KGQVEEDKGGIKTDAFFKTSVPDVYAVGDVATFP 302
Cdd:PRK13984 520 SDQIIVEADMVVEAIGQAPDYSYLpeelKSKLEFVRGRILTNEYGQTSIPWLFAGGDIVHGP 581
|
|
|