NCBI Conserved Domain Search

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Conserved domains on [gi\|94969525\|ref\|YP_591573.1\|]
response regulator receiver modulated metal dependent phosphohydrolase [Candidatus Koribacter versatilis Ellin345]

Graphical summary show options »	Show site features Horizontal zoom: ×	?



List of domain hits		?

References:

Marchler-Bauer A et al. (2009), "CDD: specific functional annotation with the Conserved Domain Database.", Nucleic Acids Res.37(D)205-10.

Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.

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of the residues that compose this conserved feature have been mapped to the query sequence.

Click on the triangle to view details about the feature, including a multiple sequence alignment of your query sequence and the protein sequences used to curate the domain model, where hash marks (#) above the aligned sequences show the location of the conserved feature residues.

The thumbnail image, if present, provides an approximate view of the feature's location in 3 dimensions. Click on the triangle for interactive 3D structure viewing options.

This image shows a graphical summary of conserved domains identified on the query sequence. The Show Concise/Full Display button at the top of the page can be used to select the desired level of detail: only top scoring hits (labeled illustration) or all hits (labeled illustration).
Domains are color coded according to superfamilies to which they have been assigned. Hits with scores that pass a domain-specific threshold (specific hits) are drawn in bright colors. Others (non-specific hits) and superfamily placeholders are drawn in pastel colors.
if a domain or superfamily has been annotated with functional sites (conserved features), they are mapped to the query sequence and indicated through sets of triangles with the same color and shade of the domain or superfamily that provides the annotation.
Mouse over the colored bars or triangles to see descriptions of the domains and features. click on the bars or triangles to view your query sequence embedded in a multiple sequence alignment of the proteins used to develop the corresponding domain model.

The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores. Click on the PssmId to view the multiple sequence alignment of the proteins used to develop the corresponding domain model.

To view your query sequence embedded in that multiple sequence alignment, click on the colored bars in the Graphical Summary portion of the search results page, or click on the triangles, if present, that represent functional sites (conserved features) mapped to the query sequence.

Concise Display shows only the best scoring domain model, in each hit category listed below except non-specific hits, for each region on the query sequence. (labeled illustration)
Full Display shows all domain models, in each hit category below, that meet or exceed the RPS-BLAST threshold for statistical significance. (labeled illustration)
Four types of hits can be shown, as available, for each region on the query sequence:

specific hits meet or exceed a domain-specific e-value threshold (illustrated example) and represent a very high confidence that the query sequence belongs to the same protein family as the sequences use to create the domain model
non-specific hits meet or exceed the RPS-BLAST threshold for statistical significance (default E-value cutoff of 0.01, or an E-value selected by user via the advanced search options)
the domain superfamily to which the specific and non-specific hits belong
multi-domain models that were computationally detected and are likely to contain multiple single domains

The CD-Search help document provides more detail about the tool and its features.

Retrieve proteins that contain one or more of the domains present in the query sequence, using the Conserved Domain Architecture Retrieval Tool (CDART).

Modify your query to search against a different database and/or use advanced search options

29071

cd00156

REC

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB), now recently identified in eukaroytes ETR1 Arabidopsis thaliana; this domain receives the signal from the sensor partner in a two-component systems; contains a phosphoacceptor site that is phosphorylated by histidine kinase homologs; usually found N-terminal to a DNA binding effector domain; forms homodimers

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC,...

true

false

true

113

2e-23

104.94

100.00

2,6,0,39,46,39,74

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   7 LVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTAVH 86
cd00156       1 LIVDDDPLIRELLRRLLEKEGYEVVEAEDGEEALALLAE-EKPDLILLDIMMPGMDGLELLRRIRKRGPDIPIIFLTAHG 79

                        90       100       110
                ....*....|....*....|....*....|....
gi 94969525  87 DISVALAAIRNGAYDYLLKPFEREQLLAMVRRAL 120
cd00156      80 DDEDAVEALKAGADDYLTKPFSPEELLARIRALL 113

cl09944

142340

REC

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC,...

28958

cd00077

HDc

Metal dependent phosphohydrolases with conserved 'HD' motif

true

false

true

145

2e-15

78.20

95.86

3,178,5,44,229,49,31,260,87,57

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 179 HSKRVTAFTIAIARAMGLETEKIRVIARGAFLHDIGKMAIPDAIlrkpgplTPEEVAIMREHCYRGYHMLRKIPFLYEAA 258
cd00077       6 HSLRVAQLARRLAEELGLSEEDIELLRLAALLHDIGKPGTPDAI-------TEEESELEKDHAIVGAEILRELLLEEVIK 78

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 94969525 259 EI-------VYAHQEFYDGTGYPRGLKGEQIPLGSRIFAVADTLDAITSDRPYRAAQSIQAAREEI 317
cd00077      79 LIdelilavDASHHERLDGLGYPDGLKGEEITLEARIVKLADRLDALRRDSREKRRRIAEEDLEEL 144

cl00076

140417

HDc

Metal dependent phosphohydrolases with conserved 'HD' motif

109140

pfam00072

Response_reg

Response regulator receiver domain

false

111

4e-23

104.20

100.00

2,5,0,40,46,40,71

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTAV 85
pfam00072     1 VLIVDDDPLIRELLRQLLEKEGYVVAEADDGEEALELLKE-KRPDLILLDIRMPGMDGLELLRRIRRRPPTTPVIVLTAH 79

                        90       100       110
                ....*....|....*....|....*....|..
gi 94969525  86 HDISVALAAIRNGAYDYLLKPFEREQLLAMVR 117
pfam00072    80 GDEEDAVEALKAGANDFLSKPFDPEELVAALR 111

cl09944

142340

REC

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC,...

-1

31127

COG0784

CheY

FOG: CheY-like receiver [Signal transduction mechanisms]

false

130

3e-19

91.06

97.69

3,0,2,36,36,39,70,106,110,19

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSG-LQALAVLESGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPV 79
COG0784       3 LSGLRVLVVDDEPVNRRLLKRLLEDLGYEVVEAADGeEEALELLRELPQPDLILLDINMPGMDGIELLRRLRARGPNIPV 82

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 94969525  80 VMVTAVHDISVALAAIRNGAYDYLLKP-FEREQLLAMVRRALENRRL 125
COG0784      83 ILLTAYADEADRERALAAGADDYLTKPiFLEEELLAALRRLLARAAA 129

cl09944

142340

REC

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC,...

-1

128747

smart00471

HDc

Metal dependent phosphohydrolases with conserved 'HD' motif.

false

124

1e-11

65.78

92.74

5,178,7,19,199,26,28,235,54,25,260,83,7,273,90,32

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 179 HSKRVTAFTIAIARAMGLEteKIRVIARGAFLHDIGKMAIPDAILRKPGpltpeevaIMREHCYRGYHMLRKIPFLYEAA 258
smart00471    8 HSLRVAQLAAALAEELGLL--DIELLLLAALLHDIGKPGTPDSFLVKTS--------VLEDHHFIGAEILLEEEEPRILE 77

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|.
gi 94969525 259 EI----VYAHQEFydgtgyPRGLKGEQIPLGSRIFAVADTLDAITSDRPYR 305
smart00471   78 EIlataILSHHER------PDGLRGEPITLEARIVKVADRLDALRRDRRYR 122

cl00076

140417

HDc

Metal dependent phosphohydrolases with conserved 'HD' motif

-1

110919

pfam01966

HD domain

false

108

8e-11

63.03

97.22

5,178,3,25,206,28,14,227,42,28,255,71,18,279,89,19

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 179 HSKRVTAFTIAIARAMGLETEKIRViarGAFLHDIGKMAIPDailrkpgPLTPEEVAIMREHCYRGYHMLRKIPFLY-EA 257
pfam01966     4 HSLRVALLARELAEELGLDPELLLL---AALLHDIGKDPFGF-------LEKLEDFGIFKSHSVVGAEILRELEKRLgVD 73

                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 94969525 258 AEIVYAHQEFYDGTGYprglkgEQIPLGSRIFAVADTLDAI 298
pfam01966    74 LELILEHHESWEGAGY------EPISLEARIVKLADRLDAL 108

cl00076

140417

HDc

Metal dependent phosphohydrolases with conserved 'HD' motif

-1

138024

PRK10610

chemotaxis regulatory protein CheY; Provisional

false

129

1e-10

62.35

81.40

4,4,6,24,28,31,19,48,50,20,68,72,39

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGY-KTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLE--KTKERYPDMPVVM 81
PRK10610      7 KFLVVDDFSTMRRIVRNLLKELGFnNVEEAEDGVDALNKLQAGG-FGFVISDWNMPNMDGLELLKtiRADGAMSALPVLM 85

                        90       100
                ....*....|....*....|....*.
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPF 107
PRK10610     86 VTAEAKKENIIAAAQAGASGYVVKPF 111

cl09944

142340

REC

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC,...

-1

128724

smart00448

REC

cheY-homologous receiver domain

false

3e-08

54.51

96.36

2,4,1,41,46,42,12

                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMM 58
smart00448    2 RILVVDDDPLLRELLKALLEREGYEVDEATDGEEALELLKE-EKPDLILLDIMM 54

cl09944

142340

REC

Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC,...

-1

129378

TIGR00277

HDIG

uncharacterized domain HDIG

false

3e-06

47.71

90.00

4,178,7,24,205,31,10,227,41,4,232,45,34

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 179 HSKRVTAFTIAIARAMGLETEKIRviaRGAFLHDIGKmaipdailrkpgPLTPeEVAIMREHCYRGYHMLRKIPFLYEAA 258
TIGR00277     8 HSLEVAKLAEALARELGLDVELAR---RGALLHDIGK------------PITR-EGVIFESHAVVGAEIARKYGEPLEVI 71


                ....*...
gi 94969525 259 EIVYAHQE 266
TIGR00277    72 DIIAEHHG 79

cl00076

140417

HDc

Metal dependent phosphohydrolases with conserved 'HD' motif

-1

33243

COG3437

Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]

Response regulator containing a CheY-like receiver domain and an HD-GYP domain [...

true

false

360

1e-69

258.69

95.83

5,4,15,41,46,56,29,75,88,71,149,159,102,251,262,98

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYP---DMPVVM 81
COG3437      16 TVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQE-EPPDLVLLDVRMPEMDGAEVLNKLKAMSPstrRIPVIL 94

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQTNLESLVSARTEQlrqAMADLERSYDIT 161
COG3437      95 LTAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHLQLKRNEDFLLDQNLYLELQELRRRTE---ELAQIEDNLDET 171

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 162 LEALGDALDLKDAETEGHSKRVTAFTIAIARAMGLETEKIRVIARGAFLHDIGKMAIPDAILRKPGPLTPEEVAIMREHC 241
COG3437     172 LEELAALLEVRDYETGDHLERVAQYSELLAELLGLSEEEVDLIKKAAPLHDIGKVAIPDSILLKPGKLTSEEFEIMKGHP 251

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 242 YRGYHMLRKI-PFLYEAAEIVYAHQEFYDGTGYPRGLKGEQIPLGSRIFAVADTLDAITSDRPYRAAQSIQAAREEIAQW 320
COG3437     252 ILGAEILKSSeRLMQVAAEIARHHHERWDGSGYPDGLKGDEIPLSARIVAIADVFDALVSGRPYKEAMSTEEALEIIRAQ 331

                       330       340
                ....*....|....*....|....*....
gi 94969525 321 SARQFDPKVVDTFLQMPDTIWRDLRREID 349
COG3437     332 SGRLFDPKLVEAFIQVEDEIIDIARRFAD 360

-1

32388

COG2206

c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]

false

true

false

344

2e-50

194.59

58.14

3,134,109,32,168,141,84,252,226,83

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 135 NLESLVSARTEQLRQAMADLERSYDITLEALGdaLDLKDAETEGHSKRVTAFTIAIARAMGLETEKIRVIARGAFLHDIG 214
COG2206     110 AKLDATLAVRIELSKVAREIVKKALVALARGD--IKAKDDYTYGHSVRVAELAEAIAKKLGLSEEKIEELALAGLLHDIG 187

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 215 KMAIPDAILRKPGPLTPEEVAIMREHCYRGYHMLRKIP-FLYEAAEIVYAHQEFYDGTGYPRGLKGEQIPLGSRIFAVAD 293
COG2206     188 KIGIPDSILNKPGKLTEEEFEIIKKHPIYGYDILKDLPeFLESVRAVALRHHERWDGTGYPRGLKGEEIPLEARIIAVAD 267

                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 94969525 294 TLDAITSDRPYRAAQSIQAAREEIAQWSARQFDPKVVDTFLQ 335
COG2206     268 VYDALTSDRPYKKAKSPEEALEELRKNSGGKFDPKVVDAFLK 309

-1

32386

COG2204

AtoC

Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]

Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding...

false

true

false

464

4e-31

130.80

34.91

3,0,1,47,48,48,92,140,146,17

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERYPDMPVV 80
COG2204       2 MMMARILVVDDDPDIRELLEQALELAGYEVVTAESAEEALEALSESP-FDLVLLDIRMPGMDGLELLKEIKSRDPDLPVI 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  81 MVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQTNLESLV------SARTEQLRQAMADL 154
COG2204      81 VMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELRELQRENRRSLKRAKSLGgelvgeSPAMQQLRRLIAKV 160


                ...
gi 94969525 155 ERS 157
COG2204     161 APS 163

-1

138540

PRK11361

acetoacetate metabolism regulatory protein AtoC; Provisional

false

true

false

457

3e-21

97.99

35.67

3,1,2,42,44,44,87,131,139,26

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   2 PTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLeSGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVM 81
PRK11361      3 AINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLF-ADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVIL 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRA--------YQTNLESLVSARTEQLRQAMAD 153
PRK11361     82 MTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMKKEIRHlhqalstsWQWGHILTNSPAMMDICKDTAK 161


                ....
gi 94969525 154 LERS 157
PRK11361    162 IALS 165

-1

130877

TIGR01818

ntrC

nitrogen regulation protein NR(I)

false

true

false

463

4e-20

94.03

25.27

2,5,0,43,49,43,74

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTAV 85
TIGR01818     1 VWVVDDDRSIRWVLEKALSRAGYEVRTFGNAASVLRALARGQP-DLLITDVRMPGEDGLDLLPQIKKRHPQLPVIVMTAH 79

                        90       100       110
                ....*....|....*....|....*....|....*...
gi 94969525  86 HDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENR 123
TIGR01818    80 SDLDTAVAAYQRGAFEYLPKPFDLDEAVTLVERALAHA 117

-1

138282

PRK10923

glnG

nitrogen regulation protein NR(I); Provisional

false

true

false

469

7e-19

89.98

28.57

2,0,0,45,46,45,89

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVV 80
PRK10923      1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLEALAS-KTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVI 79

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 94969525  81 MVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQTN 135
PRK10923     80 IMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNIQVN 134

-1

31088

COG0745

OmpR

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]

Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-...

false

true

false

229

8e-19

89.62

55.90

4,4,1,40,46,41,27,73,69,47,122,116,13

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLEsgEEFELMLSDLMMAELDGIGLLEKTKER-YPDMPVVMVT 83
COG0745       2 RILLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAR--EQPDLVLLDLMLPDLDGLELCRRLRAKkGSGPPIIVLT 79

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 94969525  84 AVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALenRRLKLENRAYQTN 135
COG0745      80 ARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALL--RRNAGASRAEASE 129

-1

137244

PRK09390

fixJ

response regulator FixJ; Provisional

false

true

false

202

1e-18

89.32

75.74

2,0,0,44,45,44,109

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLEsGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVV 80
PRK09390      1 STKGVVHVVDDDEAMRDSLAFLLDSAGFEVRLFESAQAFLDALP-GLRFGCVVTDVRMPGIDGIELLRRLKARGSPLPVI 79

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 94969525  81 MVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQTNLESLVSARTEQLRQAMADL 154
PRK09390     80 VMTGHGDVPLAVEAMKLGAIDFIEKPFEDERLIGAIERALAQAPAAAKSEAVAADIRARIASLSERERQVMDGL 153

-1

34204

COG4566

TtrR

Response regulator [Signal transduction mechanisms]

false

true

false

202

9e-18

86.45

78.22

3,0,0,7,7,8,46,54,54,104

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRIL-VVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEEFELMLsDLMMAELDGIGLLEKTKERYPDMPV 79
COG4566       1 MPREPLVhVVDDDESVRDALAFLLESAGFQVKCFASAEEFLAAAPLDRPGCLLL-DVRMPGMSGLELQDRLAERGIRLPV 79

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 94969525  80 VMVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQTNLESLVSARTEQLRQAMADLERSY 158
COG4566      80 IFLTGHGDIPMAVQAMKAGAVDFLEKPFSEQDLLDAVERALARDASRRAEADRQAAIRARLATLTPRERQVLDLVVRGL 158

-1

137850

PRK10365

transcriptional regulatory protein ZraR; Provisional

false

true

false

441

1e-16

82.77

26.76

2,5,7,40,46,47,78

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTAV 85
PRK10365      8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRE-QVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAY 86

                        90       100       110
                ....*....|....*....|....*....|....*....
gi 94969525  86 HDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRR 124
PRK10365     87 SSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTH 125

-1

33501

COG3706

PleD

Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]

Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal...

false

true

false

435

1e-16

82.27

33.10

4,4,133,41,46,174,21,67,197,58,125,257,20

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLL--EKTKERYPDMPVVMV 82
COG3706     134 KILVVDDDATQRERLRRILQVEGFRVVEATDGEEALLQLAE-LPPDLVLLDANMPDMDGLELCtrLRQLERTRDIPIILL 212

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRL--KLENRAYQTNLESLVSARTE 145
COG3706     213 SSKDDDELVVRAFELGVNDYITKPIEEGELRARLRRQLRRKRYerQLRESLERLQELALVDGLTG 277

-1

139663

PRK13557

histidine kinase; Provisional

false

true

false

538

1e-15

79.38

22.30

2,2,412,56,58,469,63

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   3 TDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEEFELMLSDLMM-AELDGIGLLEKTKERYPDMPVVM 81
PRK13557    413 TETILIVDDRPDVAELARMILEDFGYRTLVASNGREALEILESHPEVDLLFTDLIMpGGMNGVMLAREARRRQPKIKVLL 492

                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALE 121
PRK13557    493 TTGYAEASIERTDVGGSEFDIVNKPYRRAELARRVRMVLD 532

-1

133606

CHL00148

orf27

Ycf27; Reviewed

false

true

false

240

1e-15

78.93

49.58

3,1,4,42,44,46,27,72,73,50

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   2 PTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLeSGEEFELMLSDLMMAELDGIGLLEKTKeRYPDMPVVM 81
CHL00148      5 SKEKILVVDDEASIRRILETRLSIIGYEVITASDGEEALKLF-HQEQPDLVILDVMMPKLDGYGVCQEIR-KESDVPIIM 82

                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALEN 122
CHL00148     83 LTALGDVSDRITGLELGADDYVVKPFSPKELEARIRSVLRR 123

-1

34367

COG4753

Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]

Response regulator containing CheY-like receiver domain and AraC-type DNA-binding...

false

true

false

475

2e-15

78.43

30.53

4,4,2,25,29,30,16,46,46,76,122,123,24

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYK---TQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVM 81
COG4753       3 KVLIVDDEPLIREGLKSLIDWEALGievVGTAANGKEALELIQE-TQPDIVITDINMPGMDGLDLIKAIKEQSPDTEFII 81

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALEN-RRLKLENRAYQTNLESLVSARTEQ 146
COG4753      82 LSGYDEFEYAKKAMKLGVKDYLLKPVDKAELEEALKKIIGKlEEQQKVKQDIEKLLTLLIGHEPLE 147

-1

138091

PRK10693

response regulator of RpoS; Provisional

false

true

false

337

4e-15

77.43

39.47

3,4,8,40,45,48,63,108,116,25

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLEsGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK10693      9 QILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLG-GFTPDLMICDIAMPRMNGLKFVEHLRNRGDQTPVLVISA 87

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFE-----REQLLAMVRRALENRRLKLENRAYQ 133
PRK10693     88 TENMADIAKALRLGVEDVLLKPVKdlnrlREAVFACLYPSMFNSRVEEEERLFR 141

-1

131209

TIGR02154

PhoB

phosphate regulon transcriptional regulatory protein PhoB

false

true

false

226

5e-15

76.98

53.54

3,4,3,41,46,44,22,68,68,56

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLE--KTKERYPDMPVVMV 82
TIGR02154     4 RILVVEDEPAIRELIAYNLEKAGYDVVEAGDGDEALTLINE-RGPDLILLDWMLPGTSGIELCRrlRRRPETRAIPIIML 82

                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRR 124
TIGR02154    83 TARGEEEDRVRGLETGADDYITKPFSPRELLARIKAVLRRIR 124

-1

32379

COG2197

CitB

Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]

Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain...

false

true

false

211

1e-13

72.68

57.35

3,4,1,23,27,26,18,46,44,78

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAG--YKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMV 82
COG2197       2 KVLIVDDHPLVREGLRQLLELEPdlEVVGEASNGEEALDLARE-LKPDVVLLDLSMPGMDGLEALKQLRARGPDIKVVVL 80

                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRR 124
COG2197      81 TAHDDPAYVIRALRAGADGYLLKDASPEELVEAIRAVAAGGT 122

-1

34203

COG4565

CitB

Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]

Response regulator of citrate/malate metabolism [Transcription / Signal transduction...

false

true

false

224

2e-13

71.78

83.48

8,4,1,27,31,30,14,46,44,78,125,122,7,132,131,14,148,145,11,159,157,10,172,167,21

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQ--QAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMV 82
COG4565       2 NVLIIEDDPMVAEIHRRYVKQIPGFSVvgTAGTLEEAKMIIEE-FKPDLILLDIYMPDGNGIELLPELRSQHYPVDVIVI 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRlKLENRAY--QTNLESLVSARTEQlrQAMADLERSYD- 159
COG4565      81 TAASDMETIKEALRYGVVDYLIKPFTFERLQQALTRYRQKRH-ALESHQQlsQKELDQLFNIQSKE--QPPDDLPKGLDe 157

                       170       180       190
                ....*....|....*....|....*....|....
gi 94969525 160 ITLEALGDALdlkDAETEGHSKRVTAFTIAIARA 193
COG4565     158 LTLQKVREAL---KEPDQELTAEELAQALGISRV 188

-1

130454

TIGR01387

cztR_silR_copR

heavy metal response regulator

false

true

false

218

8e-13

69.83

54.13

2,5,0,42,48,42,76

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTAV 85
TIGR01387     1 ILVVEDEQKTAEYLQQGLSESGYVVDAASNGRDGLHLALKDD-YDLIILDVMLPGMDGWQILQTLRRSGKQTPVLFLTAR 79

                        90       100       110
                ....*....|....*....|....*....|....*....
gi 94969525  86 HDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRR 124
TIGR01387    80 DSVADKVKGLDLGADDYLVKPFSFSELLARVRTLLRRSH 118

-1

137400

PRK09581

pleD

response regulator PleD; Reviewed

false

true

false

457

1e-12

69.18

25.38

3,2,1,43,46,44,31,77,77,40

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   3 TDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDM--PVV 80
PRK09581      2 TARILVVDDIPANVKLLEAKLLAEYYTVLTASSGAEAIEICER-EQPDIILLDVMMPGMDGFEVCRRLKSDPATAhiPVV 80

                        90       100       110
                ....*....|....*....|....*....|....*..
gi 94969525  81 MVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVR 117
PRK09581     81 MVTALDDPSDRVRGLEAGADDFLTKPINDVALFARVK 117

-1

137310

PRK09468

ompR

osmolarity response regulator; Provisional

false

true

false

239

1e-12

68.87

50.21

2,2,4,43,46,47,77

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   3 TDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMV 82
PRK09468      5 NYKILVVDDDMRLRALLERYLTEQGFQVRSAANAEQMDRLLTR-ESFHLMVLDLMLPGEDGLSICRRLRSQNNPTPIIML 83

                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENR 123
PRK09468     84 TAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRRQ 124

-1

138051

PRK10643

DNA-binding transcriptional regulator BasR; Provisional

false

true

false

222

3e-12

68.19

57.21

3,4,1,43,48,44,72,129,116,12

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK10643      2 KILIVEDDTLLLQGLILAAQTEGYACDGVSTAREAEQSLESGH-YSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTA 80

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALenrrlklenRAYQTNLESLVS 141
PRK10643     81 RDTLEDRIAGLDVGADDYLVKPFALEELHARIRALL---------RRHNNQGESELQ 128

-1

137546

PRK09836

DNA-binding transcriptional activator CusR; Provisional

false

true

false

226

3e-11

64.65

50.88

2,4,1,43,48,44,72

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK09836      2 KLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGD-YDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTA 80

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRAL 120
PRK09836     81 LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLL 116

-1

34205

COG4567

Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]

Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [..

false

true

false

182

4e-11

64.22

87.36

3,1,7,44,46,51,70,121,121,45

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   2 PTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVM 81
COG4567       8 PDKSLLLVDDDTPFLRTLARAMERRGFAVVTAESVEEALAAART-APPAYAVVDLKLGDGSGLAVIEALRERRADMRIVV 86

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVrraleNRRLKLENRAYQTNLESLVSARTEQLRQAMADLERSYDIT 161
COG4567      87 LTGYASIATAVEAVKLGACDYLAKPADADDILAAL-----LRREPDEDTAPPENPMSADRLRWEHIQRVLEECEGNISET 161


                ....*
gi 94969525 162 LEALG 166
COG4567     162 ARRLN 166

-1

138305

PRK10955

DNA-binding transcriptional regulator CpxR; Provisional

false

true

false

232

6e-11

63.69

70.26

6,3,1,42,47,43,27,75,70,45,122,115,9,132,124,27,159,152,12

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   4 DRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgeEFELMLSDLMMAELDGIGLLEKTKERYpDMPVVMVT 83
PRK10955      2 NKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDD--SIDLLLLDVMMPKKNGIDTLKALRQTH-QTPVIMLT 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  84 AVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALenRRLKLENRAyQTNLESLVSARTEQLRQAMADLERSYD-ITL 162
PRK10955     79 ARGSELDRVLGLELGADDYLPKPFNDRELVARIRAIL--RRSHWSEQQ-QNNDNGSPTLEVDALSLNPGRQEASFDgQTL 155


                ....*....
gi 94969525 163 EALGDALDL 171
PRK10955    156 ELTGTEFTL 164

-1

138104

PRK10710

DNA-binding transcriptional regulator BaeR; Provisional

false

true

false

240

1e-10

62.84

65.00

7,2,9,43,46,52,25,72,77,48,122,125,20,143,145,7,156,152,3,165,155,10

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   3 TDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKeRYPDMPVVMV 82
PRK10710     10 TPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDEVLPYVRQ-TPPDLILLDLMLPGTDGLTLCREIR-RFSDIPIVMV 87

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALenRRLKLENRAYQTNLESLVSArTEQLRQAmadlerSYDitl 162
PRK10710     88 TAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTIL--RRCKPQRELQQQDAESPLII-DESRFQA------SWR--- 155

                       170
                ....*....|...
gi 94969525 163 ealGDALDLKDAE 175
PRK10710    156 ---GKMLDLTPAE 165

-1

33728

COG3947

Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms]

Response regulator containing CheY-like receiver and SARP domains [Signal transduction...

false

true

false

361

4e-10

61.14

52.63

6,4,1,41,46,42,38,85,80,2,88,82,37,125,133,28,153,164,27

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
COG3947       2 RIIIVDDDAAIVKLLSVILSRAGHEVRSCSHPVEALDLLEV-FKPDLIFLDIVMPYMNGIEFAEQVRDIESAVPIIFISS 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  85 vHDiSVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRL--------------KLENRAYQTNLESLVSARTEQLRQA 150
COG3947      81 -HA-EYADDSFGMNLDDYLPKPVTPEKLNRAIDRRLKRVELtaeeesgtqiscfgGTEVVLRQGQQVKWISRKALELFAY 158

                       170       180       190
                ....*....|....*....|....*....|...
gi 94969525 151 MAD---LERSYDITLEALGDALDLKDAETEGHS 180
COG3947     159 LVEhkgKEVTSWEAIEALWPEKDEKKASSLLHT 191

-1

138391

PRK11083

DNA-binding response regulator CreB; Provisional

false

true

false

229

1e-09

59.61

53.71

3,0,0,46,47,46,73,122,119,4

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGeEFELMLSDLMMAELDGIGLLEKTKERYPDMPVV 80
PRK11083      1 MQQPTILLVEDEQAIADTLVYALQSEGFTVEWFERGLPALDKLRQQ-PPDLVILDVGLPDISGFELCRQLRAFHPALPVI 79

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 94969525  81 MVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALenRRLK 126
PRK11083     80 FLTARSDEVDRLVGLEIGADDYVAKPFSPREVAARVRTIL--RRVK 123

-1

131922

TIGR02875

spore_0_A

sporulation transcription factor Spo0A

false

true

false

262

1e-09

59.42

46.18

6,4,3,21,30,24,2,32,33,13,46,46,23,69,70,9,78,80,44

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNagyktQQ-------AGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEK-TKERYPD 76
TIGR02875     4 RIVIADDNKEFCNLLKEYLAA-----QPdmevvgvAHNGVDALELIKE-QQPDVVVLDIIMPHLDGIGVLEKlNEIELSA 77

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 94969525  77 MP-VVMVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALEN 122
TIGR02875    78 RPrVIMLSAFGQEKITQRAVALGADYYVLKPFDLEILAARIRQLAWG 124

-1

138611

PRK11517

transcriptional regulatory protein YedW; Provisional

false

true

false

223

4e-09

57.63

51.12

3,4,1,37,42,38,25,68,63,52

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAvLESGEEFELMLSDLMMAELDGIGLLeKTKERYPDMPVVMVTA 84
PRK11517      2 KILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLY-LALKDDYALIILDIMLPGMDGWQIL-QTLRTAKQTPVICLTA 79

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRAL 120
PRK11517     80 RDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQL 115

-1

138058

PRK10651

transcriptional regulator NarL; Provisional

false

true

false

216

1e-08

55.84

56.94

4,0,0,4,4,7,26,30,35,18,49,53,70

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTD---RILVVDDEEPIREIVSSMLSNAGYKT--QQAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLLEKTKERYP 75
PRK10651      1 MSNQepaTILLIDDHPMLRTGVKQLISMAPDITvvGEASNGEQGIELAESLDP-DLILLDLNMPGMNGLETLDKLREKSL 79

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 94969525  76 DMPVVMVTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRA 119
PRK10651     80 SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123

-1

137960

PRK10529

DNA-binding transcriptional activator KdpE; Provisional

false

true

false

225

2e-08

55.62

50.22

4,5,3,35,42,38,4,46,43,26,73,69,47

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALavLESG-EEFELMLSDLMMAELDGIGLLEKTKErYPDMPVVMVTA 84
PRK10529      4 VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGL--LEAAtRKPDLIILDLGLPDGDGIEFIRDLRQ-WSAIPVIVLSA 80

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRAL 120
PRK10529     81 RSEESDKIAALDAGADDYLSKPFGIGELQARLRVAL 116

-1

104359

PRK10161

transcriptional regulator PhoB; Provisional

false

true

false

229

2e-08

55.49

51.09

3,4,3,44,49,47,24,73,73,47

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLLEKTKER--YPDMPVVMV 82
PRK10161      4 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWP-DLILLDWMLPGGSGIQFIKHLKREsmTRDIPVVML 82

                        90       100       110
                ....*....|....*....|....*....|....*...
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRAL 120
PRK10161     83 TARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVM 120

-1

134369

PRK00742

chemotaxis-specific methylesterase; Provisional

false

true

false

345

3e-08

54.79

31.88

6,4,3,21,25,30,2,31,32,14,46,46,29,76,75,9,85,86,27

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSN------AGyktqQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYPdMP 78
PRK00742      4 RVLVVDDSAFMRRLLSEILNSdpdievVG----TARDGLEAVEKIKK-LNPDVITLDVEMPVMDGIEALRKIMALRP-TP 77

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 94969525  79 VVMVTAV--HDISVALAAIRNGAYDYLLKPFEREQL 112
PRK00742     78 VVMVSSLteRGAEITLEALELGAVDFVPKPFLGISE 113

-1

131961

TIGR02915

PEP_resp_reg

putative PEP-CTERM system response regulator

false

true

false

445

3e-08

54.76

38.43

6,5,0,15,22,15,25,47,44,86,133,135,7,141,142,15,156,159,12

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSsmLSNAGYKTQQAGSGLQALAVLESGE----EFELMLSDLMMAELDGIGLLEKTKERYPDMPVVM 81
TIGR02915     1 LLIVEDDLGLQKQLK--WSFADYELAVAADRESAIALVRRHEpavvTLDLGLPPDADGASEGLAALQQILAIAPDTKVIV 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  82 VTAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQ-----TNLESLVsARTEQLRQAMADLER 156
TIGR02915    79 ITGNDDRENAVKAIGLGAYDFYQKPIDPDVLKLIVDRAFHLYTLETENRRLQsalggTALRGLI-TSSPGMQKICRTIEK 157

                       170
                ....*....|....
gi 94969525 157 --SYDITLEALGDA 168
TIGR02915   158 iaPSDITVLLLGES 171

-1

132001

TIGR02956

TMAO_torS

TMAO reductase sytem sensor TorS

false

true

false

968

3e-08

54.40

13.43

5,0,699,45,46,744,29,75,776,9,85,785,16,101,802,27

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   1 MPTDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYP---DM 77
TIGR02956   700 LPPQRVLLVEDNEVNQMVAQGFLTRLGHKVTLAESGQSALECFHQ-HAFDLALLDINLPDGDGVTLLQQLRAIYGaknEV 778

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 94969525  78 PVVMVTAvHDISVALAAIRNGAYD-YLLKPFEREQLLAMVRRALENRRLKLE 128
TIGR02956   779 KFIAFSA-HVFNEDVAQYLAAGFDgFLAKPVVEEQLTAMIAVILAGGKSNTE 829

-1

138153

PRK10766

DNA-binding transcriptional regulator TorR; Provisional

false

true

false

224

4e-08

54.28

50.89

3,4,3,40,45,43,28,74,71,46

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLEsGEEFELMLSDLMMAELDGIGLLEKTKERyPDMPVVMVTA 84
PRK10766      4 HILVVEDEPVTRARLQGYFEQEGYRVSEAASGAGMREIMQ-NQHVDLILLDINLPGEDGLMLTRELRSR-STVGIILVTG 81

                        90       100       110
                ....*....|....*....|....*....|....*.
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRAL 120
PRK10766     82 RTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLL 117

-1

138589

PRK11466

hybrid sensory histidine kinase TorS; Provisional

false

true

false

912

6e-08

53.88

18.75

6,4,682,80,85,762,19,104,782,17,121,802,7,130,809,5,136,814,39

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK11466    683 RLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDYDGITLARQLAQQYPSLVLIGFSA 762

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  85 vHDISVALAAIRNGAYDYLL-KPFEREQLLAMVRRALE---NRRLKLEnrAYQTNlESLVSARTEQLRQAMADLERSYDI 160
PRK11466    763 -HVIDETLRQRTSSLFRGIIpKPVPREVLGQLLAHYLQlqvNNDQPLD--VSQLN-EDAQLMGTEKIHEWLALFKQHALP 838

                       170
                ....*....|....*
gi 94969525 161 TLEALGDALDLKDAE 175
PRK11466    839 LLDEIDIARASQDSE 853

-1

33090

COG3279

LytT

Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]

Response regulator of the LytR/AlgR family [Transcription / Signal transduction...

false

true

false

244

1e-07

52.66

51.64

4,4,2,27,31,31,16,48,47,48,98,95,33

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQ--QAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMV 82
COG3279       3 KVLIVDDEPLAREELRRILNEIPDIEIvgEAENGEEALQLLQGLR-PDLVFLDIAMPDINGIELAARIRKGDPRPAIVFV 81

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 94969525  83 TAVHDISVALAAIRngAYDYLLKPFEREQLLAMVRRALENRRLKLENRA 131
COG3279      82 TAHDEYAVAAFEVE--ALDYLLKPISEERLAKTLERLRRYAQLQLLELL 128

-1

137827

PRK10336

DNA-binding transcriptional regulator QseB; Provisional

false

true

false

219

2e-07

51.86

53.88

3,4,1,43,48,44,60,108,108,11

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK10336      2 RILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP-YDAVILDLTLPGMDGRDILREWREKGQREPVLILTA 80

                        90       100       110
                ....*....|....*....|....*....|....*....
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFE----REQLLAMVRRA 119
PRK10336     81 RDALAERVEGLRLGADDYLCKPFAlievAARLEALMRRT 119

-1

138212

PRK10841

hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional

false

true

false

947

3e-07

51.58

8.24

4,5,826,6,12,832,3,15,836,31,47,867,37

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDeEPI-REIVSSMLSNAGYKTQQAGSGLQALAVLESGeEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK10841    827 ILVVDD-HPInRRLLADQLGSLGYQCKTANDGVDALNVLSKN-HIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTA 904

-1

32383

COG2201

CheB

Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]

Chemotaxis response regulator containing a CheY-like receiver domain and a...

false

true

false

350

5e-07

50.67

39.43

6,4,2,23,27,27,21,49,48,26,76,74,9,85,85,23,108,117,23

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAG--YKTQQAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLLEKTKERYPdMPVVMV 82
COG2201       3 RVLVVDDSALMRKVISDILNSDPdiEVVGTARNGREAIDKVKKLKP-DVITLDVEMPVMDGLEALRKIMRLRP-LPVIMV 80

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  83 TAV--HDISVALAAIRNGAYDYLLKPFE---------REQLLAMVRRALENRRLKLENRA 131
COG2201      81 SSLteEGAEATLEALELGAVDFIAKPSGgislgldevAELLIEKVRAAARQNRKSLRTPE 140

-1

33502

COG3707

AmiR

Response regulator with putative antiterminator output domain [Signal transduction mechanisms]

Response regulator with putative antiterminator output domain [Signal transduction...

false

true

false

194

8e-07

49.86

70.62

5,4,6,25,29,32,19,49,51,27,77,78,38,115,120,23

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYK-TQQAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLLEKTKERYPDmPVVMVT 83
COG3707       7 RVLVADDEALTRMDIREGLLEAGYQrVGEAADGLEAVEVCERLQP-DVVILDIEMPRRDIIEALLLASENVAR-PIVALT 84

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 94969525  84 AVHDISVALAAIRNGAYDYLLKPFEREQLLAM----VRRALENRRLKLENRAYQTNLES 138
COG3707      85 AYSDPALIEAAIEAGVMAYIVKPLDESRLLPIldvaVSRFEERRALRRELAKLKDRLEE 143

-1

137656

PRK10046

dpiA

two-component response regulator DpiA; Provisional

false

true

false

225

9e-07

49.64

61.78

6,5,6,26,31,34,17,49,51,18,67,70,9,77,79,47,124,127,18

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQ--QAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLL-EKTKERYPDmPVVMV 82
PRK10046      7 LLIVEDETPLAEMHAEYIRHIPGFSQilLAGNLAQARMMIERFKP-GLILLDNYLPDGRGINLLhELVQAHYPG-DVVFT 84

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRR-LKLENRAYQTNLESLVSA 142
PRK10046     85 TAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQRKHmLESIDSASQKQIDEMFNA 145

-1

137612

PRK09959

hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional

false

true

false

1197

1e-05

46.26

6.52

2,5,960,38,44,998,40

                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 94969525    6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLeSGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK09959     961 ILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKV-SMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTA 1038

-1

138717

PRK11697

putative two-component response-regulatory protein YehT; Provisional

false

true

false

239

2e-05

45.26

48.95

10,4,2,26,30,30,15,46,45,17,63,65,5,74,70,2,76,73,2,78,76,6,85,82,2,88,84,24,112,111,8

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKT--QQAGSGLQALAVLESgEEFELMLSDLMMAELDG---IGLLEktkeryPD-MP 78
PRK11697      3 KVLIVDDEPLAREELRELLQEEGDIEivGECSNAIEALGAIHR-LKPDVVFLDIQMPRISGlelVGMLD------PEhMP 75

                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 94969525  79 -VVMVTAvHDiSVALAAIRNGAYDYLLKPFEREQL---LAMVRRAL 120
PRK11697     76 yIVFVTA-FD-EYAIKAFEEHAFDYLLKPIDPARLaktLARLRQDR 119

-1

138099

PRK10701

DNA-binding transcriptional regulator RstA; Provisional

false

true

false

240

2e-05

45.09

54.17

3,2,0,43,46,43,28,75,71,59

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   3 TDRILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERYpDMPVVMV 82
PRK10701      1 MNTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILR-EQPDLVLLDIMLPGKDGMTICRDLRPKW-SGPIVLL 78

                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|..
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENRRLKLENRAYQT 134
PRK10701     79 TSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATQAKGLQE 130

-1

138195

PRK10816

DNA-binding transcriptional regulator PhoP; Provisional

false

true

false

223

4e-05

44.43

54.26

3,4,1,44,49,45,67,117,112,10

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESGEEfELMLSDLMMAELDGIGLLEKTKERYPDMPVVMVTA 84
PRK10816      2 RVLVVEDNALLRHHLKVQLQDAGHQVDAAEDAKEADYYLNEHLP-DIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTA 80

                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 94969525  85 VHDISVALAAIRNGAYDYLLKPFEREQLLAMVrRALENRRLKL 127
PRK10816     81 RESWQDKVEVLSAGADDYVTKPFHIEEVMARM-QALMRRNSGL 122

-1

139916

PRK13856

two-component response regulator VirG; Provisional

false

true

false

241

9e-05

43.27

48.55

4,5,3,40,46,43,27,74,70,12,86,83,37

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAVLESgEEFELMLSDLMMAELDGIGLLEKTKERyPDMPVVMVTAV 85
PRK13856      4 VLVIDDDVAMRHLIVEYLTIHAFKVTAVADSQQFNRVLSS-ETVDVVVVDLNLGREDGLEIVRSLATK-SDVPIIIISGD 81

                        90       100       110
                ....*....|....*....|....*....|....*....
gi 94969525  86 H-DISVALAAIRNGAYDYLLKPFEREQLLAMVRRALENR 123
PRK13856     82 RlEEADKVVALELGATDFIAKPFGTREFLARIRVALRVR 120

-1

33501

COG3706

PleD

Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]

Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal...

false

true

false

435

1e-04

42.60

20.00

3,27,12,20,48,32,25,75,57,42

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525  28 YKTQQAGSGLQALAVLESGEeFELMLSDLMMAELDGIGLLEKTKERypDMPVVMVTAVHDISVALAAIRNGAYDYLLKPF 107
COG3706      13 KEVATAKKGLIALAILLDHK-PDYKLLDVMMPGMDGFELCRRLKAE--PATVVMVTALDDSAPRVRGLKAGADDFLTKPV 89

                        90
                ....*....|
gi 94969525 108 EREQLLAMVR 117
COG3706      90 NDSQLFLRAK 99

-1

137892

PRK10430

DNA-binding transcriptional activator DcuR; Provisional

false

true

false

239

2e-04

42.43

61.51

8,5,3,20,25,24,12,37,37,10,47,48,65,116,113,10,126,126,6,132,134,8,140,144,6

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   6 ILVVDDEEPIREIVSSMLSN-AGYKTQQAGSGL-QALAVLESGE-EFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMV 82
PRK10430      4 VLIVDDDAMVAELNRRYVAQiPGFQCCGTASTLeKAKEIIFNSDtPIDLILLDIYMQQENGLDLLPVLHEAGCKSDVIVI 83

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLlamvRRALENRRLK---LENRAY--QTNLESLV--SARTEQ 146
PRK10430     84 SSAADAATIKDSLHYGVVDYLIKPFQASRF----EEALTGWRQKkmaLEKRQYydQAELDQLIhgSSSNEQ 150

-1

137869

PRK10403

transcriptional regulator NarP; Provisional

false

true

false

215

4e-04

40.61

53.02

3,4,7,20,24,29,17,42,46,75

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLS--NAGYKTQQAGSGLQALAvLESGEEFELMLSDLMMAELDGIGLLEKTKERYPDMPVVMV 82
PRK10403      8 QVLIVDDHPLMRRGVRQLLEldPGFEVVAEAGDGASAID-LANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIIL 86

                        90       100       110
                ....*....|....*....|....*....|....*
gi 94969525  83 TAVHDISVALAAIRNGAYDYLLKPFEREQLLAMVR 117
PRK10403     87 TVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIR 121

-1

139064

PRK12555

chemotaxis-specific methylesterase; Provisional

false

true

false

340

9e-04

39.60

30.59

5,4,2,22,34,24,15,49,48,26,76,74,9,85,85,21

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAgyktqqagSGLQALAVLESGEEF---------ELMLSDLMMAELDGIGLLEKTKERYP 75
PRK12555      3 NVGIVDDSALAREALRRIIARR--------PDHRVLGVATDGLQArdlckaqppDVVLLDLEMPRMDGLTFLRRIMRRRP 74

                        90       100       110
                ....*....|....*....|....*....|...
gi 94969525  76 dMPVVMVTAV--HDISVALAAIRNGAYDYLLKP 106
PRK12555     75 -CPVLIVSSLteAGASITYEALGAGALDAVDKP 106

-1

138409

PRK11107

hybrid sensory histidine kinase BarA; Provisional

false

true

false

920

0.005

37.18

12.50

6,4,669,37,42,706,30,72,738,12,85,750,1,90,751,4,94,760,24

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525   5 RILVVDDEEPIREIVSSMLSNAGYKTQQAGSGLQALAvLESGEEFELMLSDLMMAELDGIGLLEKTKE--RYPDMPVVMV 82
PRK11107    670 TVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVE-LAKQRPFDLIFMDIQMPGMDGIRACELIRQlpHNQNTPIIAV 748

                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 94969525  83 TAvHdisvALAA-----IRNGAYDYLLKPFEREQLLAMVRR 118
PRK11107    749 TA-H----AMAGererlLGAGMDDYLAKPIDEAALKQVLLR 784

-1

31669

COG1480

Predicted membrane-associated HD superfamily hydrolase [General function prediction only]

false

true

false

700

0.005

37.23

13.57

5,175,489,28,206,517,13,219,536,8,227,545,8,235,554,30

                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 94969525 176 TEGHSKRVTAFTIAIARAMGLETEKIRViarGAFLHDIGKMAIP------DAILRKPG-PLTPEEVA-IMREHCYRGYHM 247
COG1480     490 TYQHSVMVANLAEAAAEEIGANSLLARV---GAYYHDIGKMKRPlffienQMGGKNPHdDLSPQLSAlIIISHVKEGVEM 566

                        90
                ....*....|....*...
gi 94969525 248 LRKIPFLYEAAEIVYAHQ 265
COG1480     567 AREYKLPQEIIDIIPEHH 584

-1

active site	0	8	8	true	29071	cd00156	REC
phosphorylation site	1	1	1	true	29071	cd00156	REC
intermolecular recognition site	2	5	5	true	29071	cd00156	REC
dimerization interface	3	3	3	true	29071	cd00156	REC
Zn2+ binding site	0	4	4	true	28958	cd00077	HDc
Mg2+ binding site	1	1	1	true	28958	cd00077	HDc