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Conserved domains on  [gi|359323330|ref|XP_854084|]
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PREDICTED: calbindin [Canis lupus familiaris]

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List of domain hits

Name Accession Description Interval E-value
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
102-171 7.35e-10

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


:

Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 53.32  E-value: 7.35e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330 102 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKanktvddtKLAEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:cd00051    1 ELREAFRLFDKDGDGTISADELKAALKSLGEG--------LSEEEIDEMIREVDKDGDGKIDFEEFLELM 62
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
150-216 2.60e-08

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


:

Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 49.08  E-value: 2.60e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 359323330 150 MLKLFDSNNDGKLELTEMARLLPVQenfllkfqGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 216
Cdd:cd00051    5 AFRLFDKDGDGTISADELKAALKSL--------GEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
PTZ00184 PTZ00184
calmodulin; Provisional
14-171 3.76e-07

calmodulin; Provisional


:

Pssm-ID: 185504 [Multi-domain]  Cd Length: 149  Bit Score: 47.06  E-value: 3.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  14 SQFFEIWLHFDADGSGSLEGKELQNLIQELQQARKKAGLElspEMKTFVDQYGqrdDGKIGIVElahvlpteenFLLLF- 92
Cdd:PTZ00184  11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ---DMINEVDADG---NGTIDFPE----------FLTLMa 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  93 -RCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKtvddtklaEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:PTZ00184  75 rKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTD--------EEVDEMIREADVDGDGQINYEEFVKMM 146
EF-hand_7 pfam13499
EF-hand domain pair;
152-211 1.13e-03

EF-hand domain pair;


:

Pssm-ID: 257819 [Multi-domain]  Cd Length: 60  Bit Score: 35.82  E-value: 1.13e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  152 KLFDSNNDGKLELTEMARLLpvqeNFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 211
Cdd:pfam13499   1 KLLDKDGDGYIDVEELRKLL----KALGLKLTDEEVEELLEYDFNEFDKDGDGRISFEEF 56
 
Name Accession Description Interval E-value
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
102-171 7.35e-10

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 53.32  E-value: 7.35e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330 102 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKanktvddtKLAEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:cd00051    1 ELREAFRLFDKDGDGTISADELKAALKSLGEG--------LSEEEIDEMIREVDKDGDGKIDFEEFLELM 62
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
150-216 2.60e-08

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 49.08  E-value: 2.60e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 359323330 150 MLKLFDSNNDGKLELTEMARLLPVQenfllkfqGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 216
Cdd:cd00051    5 AFRLFDKDGDGTISADELKAALKSL--------GEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
EFh smart00054
EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in ...
190-218 4.65e-05

EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.


Pssm-ID: 197492  Cd Length: 29  Bit Score: 39.67  E-value: 4.65e-05
                           10        20
                   ....*....|....*....|....*....
gi 359323330   190 EFNKAFELYDQDGNGYIDENELDALLKDL 218
Cdd:smart00054   1 ELKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
EF-hand_6 pfam13405
EF-hand domain;
190-218 3.96e-04

EF-hand domain;


Pssm-ID: 257730  Cd Length: 30  Bit Score: 36.80  E-value: 3.96e-04
                          10        20
                  ....*....|....*....|....*....
gi 359323330  190 EFNKAFELYDQDGNGYIDENELDALLKDL 218
Cdd:pfam13405   1 ELREAFKLFDKDGDGYISLEELKKALRSL 29
EFh smart00054
EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in ...
102-130 8.33e-04

EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.


Pssm-ID: 197492  Cd Length: 29  Bit Score: 35.82  E-value: 8.33e-04
                           10        20
                   ....*....|....*....|....*....
gi 359323330   102 EFMKTWRKYDTDHSGFIETEELKNFLKDL 130
Cdd:smart00054   1 ELKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
EF-hand_6 pfam13405
EF-hand domain;
102-130 2.37e-03

EF-hand domain;


Pssm-ID: 257730  Cd Length: 30  Bit Score: 34.88  E-value: 2.37e-03
                          10        20
                  ....*....|....*....|....*....
gi 359323330  102 EFMKTWRKYDTDHSGFIETEELKNFLKDL 130
Cdd:pfam13405   1 ELREAFKLFDKDGDGYISLEELKKALRSL 29
PTZ00184 PTZ00184
calmodulin; Provisional
14-171 3.76e-07

calmodulin; Provisional


Pssm-ID: 185504 [Multi-domain]  Cd Length: 149  Bit Score: 47.06  E-value: 3.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  14 SQFFEIWLHFDADGSGSLEGKELQNLIQELQQARKKAGLElspEMKTFVDQYGqrdDGKIGIVElahvlpteenFLLLF- 92
Cdd:PTZ00184  11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ---DMINEVDADG---NGTIDFPE----------FLTLMa 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  93 -RCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKtvddtklaEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:PTZ00184  75 rKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTD--------EEVDEMIREADVDGDGQINYEEFVKMM 146
EF-hand_7 pfam13499
EF-hand domain pair;
152-211 1.13e-03

EF-hand domain pair;


Pssm-ID: 257819 [Multi-domain]  Cd Length: 60  Bit Score: 35.82  E-value: 1.13e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  152 KLFDSNNDGKLELTEMARLLpvqeNFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 211
Cdd:pfam13499   1 KLLDKDGDGYIDVEELRKLL----KALGLKLTDEEVEELLEYDFNEFDKDGDGRISFEEF 56
FRQ1 COG5126
Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / ...
101-217 1.27e-08

Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]


Pssm-ID: 227455 [Multi-domain]  Cd Length: 160  Bit Score: 51.54  E-value: 1.27e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330 101 EEFMKTWRKYDTDHSGFIETEELKNFLK------------DLLEKANKTVDDTKLAEYTDLM----------------LK 152
Cdd:COG5126   20 QELKEAFQLFDRDSDGLIDRNELGKILRslgfnpseaeinKLFEEIDAGNETVDFPEFLTVMsvklkrgdkeeelreaFK 99
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 359323330 153 LFDSNNDGKLELTEMARLLpvqenfllKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKD 217
Cdd:COG5126  100 LFDKDHDGYISIGELRRVL--------KSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156
EF-hand_7 pfam13499
EF-hand domain pair;
108-171 2.58e-06

EF-hand domain pair;


Pssm-ID: 257819 [Multi-domain]  Cd Length: 60  Bit Score: 43.53  E-value: 2.58e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359323330  108 RKYDTDHSGFIETEELKNFLKDLLEKanktVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:pfam13499   1 KLLDKDGDGYIDVEELRKLLKALGLK----LTDEEVEELLEYDFNEFDKDGDGRISFEEFLEAY 60
 
Name Accession Description Interval E-value
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
102-171 7.35e-10

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 53.32  E-value: 7.35e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330 102 EFMKTWRKYDTDHSGFIETEELKNFLKDLLEKanktvddtKLAEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:cd00051    1 ELREAFRLFDKDGDGTISADELKAALKSLGEG--------LSEEEIDEMIREVDKDGDGKIDFEEFLELM 62
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
150-216 2.60e-08

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 49.08  E-value: 2.60e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 359323330 150 MLKLFDSNNDGKLELTEMARLLPVQenfllkfqGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 216
Cdd:cd00051    5 AFRLFDKDGDGTISADELKAALKSL--------GEGLSEEEIDEMIREVDKDGDGKIDFEEFLELMA 63
EFh smart00054
EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in ...
190-218 4.65e-05

EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.


Pssm-ID: 197492  Cd Length: 29  Bit Score: 39.67  E-value: 4.65e-05
                           10        20
                   ....*....|....*....|....*....
gi 359323330   190 EFNKAFELYDQDGNGYIDENELDALLKDL 218
Cdd:smart00054   1 ELKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
190-221 6.66e-05

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 39.45  E-value: 6.66e-05
                         10        20        30
                 ....*....|....*....|....*....|..
gi 359323330 190 EFNKAFELYDQDGNGYIDENELDALLKDLCEK 221
Cdd:cd00051    1 ELREAFRLFDKDGDGTISADELKAALKSLGEG 32
EF-hand_6 pfam13405
EF-hand domain;
190-218 3.96e-04

EF-hand domain;


Pssm-ID: 257730  Cd Length: 30  Bit Score: 36.80  E-value: 3.96e-04
                          10        20
                  ....*....|....*....|....*....
gi 359323330  190 EFNKAFELYDQDGNGYIDENELDALLKDL 218
Cdd:pfam13405   1 ELREAFKLFDKDGDGYISLEELKKALRSL 29
EF-hand_1 pfam00036
EF hand; The EF-hands can be divided into two classes: signaling proteins and buffering ...
190-218 5.70e-04

EF hand; The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes.


Pssm-ID: 249529  Cd Length: 29  Bit Score: 36.27  E-value: 5.70e-04
                          10        20
                  ....*....|....*....|....*....
gi 359323330  190 EFNKAFELYDQDGNGYIDENELDALLKDL 218
Cdd:pfam00036   1 ELKEAFKEFDKDGDGKISFEEFKELLKKL 29
EFh smart00054
EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in ...
102-130 8.33e-04

EF-hand, calcium binding motif; EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.


Pssm-ID: 197492  Cd Length: 29  Bit Score: 35.82  E-value: 8.33e-04
                           10        20
                   ....*....|....*....|....*....
gi 359323330   102 EFMKTWRKYDTDHSGFIETEELKNFLKDL 130
Cdd:smart00054   1 ELKEAFRLFDKDGDGKIDFEEFKDLLKAL 29
EF-hand_6 pfam13405
EF-hand domain;
102-130 2.37e-03

EF-hand domain;


Pssm-ID: 257730  Cd Length: 30  Bit Score: 34.88  E-value: 2.37e-03
                          10        20
                  ....*....|....*....|....*....
gi 359323330  102 EFMKTWRKYDTDHSGFIETEELKNFLKDL 130
Cdd:pfam13405   1 ELREAFKLFDKDGDGYISLEELKKALRSL 29
EF-hand_1 pfam00036
EF hand; The EF-hands can be divided into two classes: signaling proteins and buffering ...
102-130 3.82e-03

EF hand; The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes.


Pssm-ID: 249529  Cd Length: 29  Bit Score: 33.96  E-value: 3.82e-03
                          10        20
                  ....*....|....*....|....*....
gi 359323330  102 EFMKTWRKYDTDHSGFIETEELKNFLKDL 130
Cdd:pfam00036   1 ELKEAFKEFDKDGDGKISFEEFKELLKKL 29
PTZ00184 PTZ00184
calmodulin; Provisional
14-171 3.76e-07

calmodulin; Provisional


Pssm-ID: 185504 [Multi-domain]  Cd Length: 149  Bit Score: 47.06  E-value: 3.76e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  14 SQFFEIWLHFDADGSGSLEGKELQNLIQELQQARKKAGLElspEMKTFVDQYGqrdDGKIGIVElahvlpteenFLLLF- 92
Cdd:PTZ00184  11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQ---DMINEVDADG---NGTIDFPE----------FLTLMa 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  93 -RCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKtvddtklaEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:PTZ00184  75 rKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTD--------EEVDEMIREADVDGDGQINYEEFVKMM 146
EF-hand_7 pfam13499
EF-hand domain pair;
152-211 1.13e-03

EF-hand domain pair;


Pssm-ID: 257819 [Multi-domain]  Cd Length: 60  Bit Score: 35.82  E-value: 1.13e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  152 KLFDSNNDGKLELTEMARLLpvqeNFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENEL 211
Cdd:pfam13499   1 KLLDKDGDGYIDVEELRKLL----KALGLKLTDEEVEELLEYDFNEFDKDGDGRISFEEF 56
FRQ1 COG5126
Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / ...
101-217 1.27e-08

Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]


Pssm-ID: 227455 [Multi-domain]  Cd Length: 160  Bit Score: 51.54  E-value: 1.27e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330 101 EEFMKTWRKYDTDHSGFIETEELKNFLK------------DLLEKANKTVDDTKLAEYTDLM----------------LK 152
Cdd:COG5126   20 QELKEAFQLFDRDSDGLIDRNELGKILRslgfnpseaeinKLFEEIDAGNETVDFPEFLTVMsvklkrgdkeeelreaFK 99
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 359323330 153 LFDSNNDGKLELTEMARLLpvqenfllKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKD 217
Cdd:COG5126  100 LFDKDHDGYISIGELRRVL--------KSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156
EF-hand_7 pfam13499
EF-hand domain pair;
108-171 2.58e-06

EF-hand domain pair;


Pssm-ID: 257819 [Multi-domain]  Cd Length: 60  Bit Score: 43.53  E-value: 2.58e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 359323330  108 RKYDTDHSGFIETEELKNFLKDLLEKanktVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 171
Cdd:pfam13499   1 KLLDKDGDGYIDVEELRKLLKALGLK----LTDEEVEELLEYDFNEFDKDGDGRISFEEFLEAY 60
FRQ1 COG5126
Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / ...
2-176 2.03e-05

Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]


Pssm-ID: 227455 [Multi-domain]  Cd Length: 160  Bit Score: 42.30  E-value: 2.03e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330   2 AQSHLQSSLITA-------SQFFEIWLHFDADGSGSLEGKELQNLIQELQQARKKAGL-ELSPEMktfvdqygqrdDGKI 73
Cdd:COG5126    1 MRSKISDLLTFTqlteeqiQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEInKLFEEI-----------DAGN 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  74 GIVELAHVLPTEENFLLlfrcqQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLlekanktvDDTKLAEYTDLMLKL 153
Cdd:COG5126   70 ETVDFPEFLTVMSVKLK-----RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSL--------GERLSDEEVEKLLKE 136
                        170       180
                 ....*....|....*....|...
gi 359323330 154 FDSNNDGKLELTEMARLLPVQEN 176
Cdd:COG5126  137 YDEDGDGEIDYEEFKKLIKDSPT 159
PTZ00184 PTZ00184
calmodulin; Provisional
101-221 9.85e-05

calmodulin; Provisional


Pssm-ID: 185504 [Multi-domain]  Cd Length: 149  Bit Score: 40.13  E-value: 9.85e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330 101 EEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKtvddtklAEYTDlMLKLFDSNNDGKLELTE----MARLLPVQEN 176
Cdd:PTZ00184  11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-------AELQD-MINEVDADGNGTIDFPEfltlMARKMKDTDS 82
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 359323330 177 fllkfqgikmcGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK 221
Cdd:PTZ00184  83 -----------EEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEK 116
PTZ00183 PTZ00183
centrin; Provisional
23-171 3.37e-04

centrin; Provisional


Pssm-ID: 185503 [Multi-domain]  Cd Length: 158  Bit Score: 38.90  E-value: 3.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 359323330  23 FDADGSGSLEGKELQNLIQELQQARKKaglelsPEMKTFVDQYGQRDDGKIGIVELAHVLPTeenflllfRCQQLKSCEE 102
Cdd:PTZ00183  26 FDTDGSGTIDPKELKVAMRSLGFEPKK------EEIKQMIADVDKDGSGKIDFEEFLDIMTK--------KLGERDPREE 91
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 359323330 103 FMKTWRKYDTDHSGFIETEELKNFLKDLLEkankTVDDTKLAEytdlMLKLFDSNNDGKLELTEMARLL 171
Cdd:PTZ00183  92 ILKAFRLFDDDKTGKISLKNLKRVAKELGE----TITDEELQE----MIDEADRNGDGEISEEEFYRIM 152
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.11
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A et al. (2009), "CDD: specific functional annotation with the Conserved Domain Database.", Nucleic Acids Res.37(D)205-10.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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