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Conserved domains on  [gi|23238254|ref|NP_689451|]
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carnitine O-palmitoyltransferase 1, muscle isoform isoform a [Homo sapiens]

Protein Classification

carnitine O-palmitoyltransferase 1( domain architecture ID 11243103)

carnitine O-palmitoyltransferase 1 catalyzes the conversion from Palmitoyl-CoA and L-carnitine to CoA and L-palmitoylcarnitine

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Carn_acyltransf pfam00755
Choline/Carnitine o-acyltransferase;
176-756 0e+00

Choline/Carnitine o-acyltransferase;


:

Pssm-ID: 425853  Cd Length: 569  Bit Score: 748.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   176 LPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRSPLMVNSN 255
Cdd:pfam00755   1 LPVPPLEDTLDRYLESVKPLLTEEEYERTEKLVEEFLKGGGPKLQERLLERAKDKKNWLEDWWLDYAYLEYRDPLVLNSN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   256 YYVM----DLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMaLGIVPMCSYQMERMFNTTRIPGKDTDVLQHLSD 331
Cdd:pfam00755  81 PFFVfpddPDPLTPTDNTQLERAANLIHAALEFKRLLDRETLPPDV-EGGVPLCMSQYRRLFNTTRIPGKERDILQHFPD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   332 S----RHVAVYHKGRFFKLWLY-EGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKN 405
Cdd:pfam00755 160 SgvepRHIVVLRKGQFYKVDVLdEDGRPLSPAELEAQLQRILDDASNPPEEGPPVGVLTTDNRDVWAKAREELLKlDPTN 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   406 KAALEAIERAAFFVALDEESysydPEDEASLSLygkALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLW 485
Cdd:pfam00755 240 AESLEAIESALFVVCLDDAS----PGDPGELAS---GLLHGDGTNRWFDKSLQLIVFKNGRAGFNGEHSPADGTPVLRLN 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   486 EFVLGTDSFHLGYtetgHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTS 565
Cdd:pfam00755 313 DYVLTDISSRLGL----PPSGDPSRSLPLPEKLEFELDPELKSAIEAAETRFDKLISDLDLRVLEFTDYGKNFIKKFKLS 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   566 PDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYR 645
Cdd:pfam00755 389 PDAFIQMALQLAYYRLHGKFAPTYESASTRKFRHGRTETIRSVTPESVAFVKAMLDPSASDEEKRELLRAAVKAHVKLTK 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   646 LAMTGAGIDRHLFCLYLVSKYLGVSSPflaEVLSEP-------WRLSTSQIPQSQIRmfdpeqhpnhlgaGGGFGPVADD 718
Cdd:pfam00755 469 EAMTGQGVDRHLFGLKLVAKEGGLPLP---ELFSDPaykksnnWVLSTSQLGSPALR-------------GGGFGPVVPD 532
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 23238254   719 GYGVSYMIaGENTIFFHISSKFSSSETNAQRFGNHIRK 756
Cdd:pfam00755 533 GYGIGYNI-QDDSISFSISSFKSSPETDTERFAKALEE 569
CPT_N pfam16484
Carnitine O-palmitoyltransferase N-terminus; This domain is found at the N-terminus of ...
1-47 3.19e-22

Carnitine O-palmitoyltransferase N-terminus; This domain is found at the N-terminus of carnitine O-palmitoyltransferases. It functions as a regulatory domain and is linked to the catalytic domain (pfam00755) via two transmembrane regions.


:

Pssm-ID: 435366  Cd Length: 47  Bit Score: 89.99  E-value: 3.19e-22
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 23238254     1 MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIK 47
Cdd:pfam16484   1 MAEAHQAVAFQFTVTPEGIDVQLSHEALKEIYLSGVRSWKKRLIRFK 47
 
Name Accession Description Interval E-value
Carn_acyltransf pfam00755
Choline/Carnitine o-acyltransferase;
176-756 0e+00

Choline/Carnitine o-acyltransferase;


Pssm-ID: 425853  Cd Length: 569  Bit Score: 748.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   176 LPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRSPLMVNSN 255
Cdd:pfam00755   1 LPVPPLEDTLDRYLESVKPLLTEEEYERTEKLVEEFLKGGGPKLQERLLERAKDKKNWLEDWWLDYAYLEYRDPLVLNSN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   256 YYVM----DLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMaLGIVPMCSYQMERMFNTTRIPGKDTDVLQHLSD 331
Cdd:pfam00755  81 PFFVfpddPDPLTPTDNTQLERAANLIHAALEFKRLLDRETLPPDV-EGGVPLCMSQYRRLFNTTRIPGKERDILQHFPD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   332 S----RHVAVYHKGRFFKLWLY-EGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKN 405
Cdd:pfam00755 160 SgvepRHIVVLRKGQFYKVDVLdEDGRPLSPAELEAQLQRILDDASNPPEEGPPVGVLTTDNRDVWAKAREELLKlDPTN 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   406 KAALEAIERAAFFVALDEESysydPEDEASLSLygkALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLW 485
Cdd:pfam00755 240 AESLEAIESALFVVCLDDAS----PGDPGELAS---GLLHGDGTNRWFDKSLQLIVFKNGRAGFNGEHSPADGTPVLRLN 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   486 EFVLGTDSFHLGYtetgHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTS 565
Cdd:pfam00755 313 DYVLTDISSRLGL----PPSGDPSRSLPLPEKLEFELDPELKSAIEAAETRFDKLISDLDLRVLEFTDYGKNFIKKFKLS 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   566 PDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYR 645
Cdd:pfam00755 389 PDAFIQMALQLAYYRLHGKFAPTYESASTRKFRHGRTETIRSVTPESVAFVKAMLDPSASDEEKRELLRAAVKAHVKLTK 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   646 LAMTGAGIDRHLFCLYLVSKYLGVSSPflaEVLSEP-------WRLSTSQIPQSQIRmfdpeqhpnhlgaGGGFGPVADD 718
Cdd:pfam00755 469 EAMTGQGVDRHLFGLKLVAKEGGLPLP---ELFSDPaykksnnWVLSTSQLGSPALR-------------GGGFGPVVPD 532
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 23238254   719 GYGVSYMIaGENTIFFHISSKFSSSETNAQRFGNHIRK 756
Cdd:pfam00755 533 GYGIGYNI-QDDSISFSISSFKSSPETDTERFAKALEE 569
CPT_N pfam16484
Carnitine O-palmitoyltransferase N-terminus; This domain is found at the N-terminus of ...
1-47 3.19e-22

Carnitine O-palmitoyltransferase N-terminus; This domain is found at the N-terminus of carnitine O-palmitoyltransferases. It functions as a regulatory domain and is linked to the catalytic domain (pfam00755) via two transmembrane regions.


Pssm-ID: 435366  Cd Length: 47  Bit Score: 89.99  E-value: 3.19e-22
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 23238254     1 MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIK 47
Cdd:pfam16484   1 MAEAHQAVAFQFTVTPEGIDVQLSHEALKEIYLSGVRSWKKRLIRFK 47
 
Name Accession Description Interval E-value
Carn_acyltransf pfam00755
Choline/Carnitine o-acyltransferase;
176-756 0e+00

Choline/Carnitine o-acyltransferase;


Pssm-ID: 425853  Cd Length: 569  Bit Score: 748.62  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   176 LPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKYLVLKSWWASNYVSDWWEEYIYLRGRSPLMVNSN 255
Cdd:pfam00755   1 LPVPPLEDTLDRYLESVKPLLTEEEYERTEKLVEEFLKGGGPKLQERLLERAKDKKNWLEDWWLDYAYLEYRDPLVLNSN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   256 YYVM----DLVLIKNTDVQAARLGNIIHAMIMYRRKLDREEIKPVMaLGIVPMCSYQMERMFNTTRIPGKDTDVLQHLSD 331
Cdd:pfam00755  81 PFFVfpddPDPLTPTDNTQLERAANLIHAALEFKRLLDRETLPPDV-EGGVPLCMSQYRRLFNTTRIPGKERDILQHFPD 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   332 S----RHVAVYHKGRFFKLWLY-EGARLLKPQDLEMQFQRILDDPSPPQPGEEKLAALTAGGRVEWAQARQAFFS-SGKN 405
Cdd:pfam00755 160 SgvepRHIVVLRKGQFYKVDVLdEDGRPLSPAELEAQLQRILDDASNPPEEGPPVGVLTTDNRDVWAKAREELLKlDPTN 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   406 KAALEAIERAAFFVALDEESysydPEDEASLSLygkALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLW 485
Cdd:pfam00755 240 AESLEAIESALFVVCLDDAS----PGDPGELAS---GLLHGDGTNRWFDKSLQLIVFKNGRAGFNGEHSPADGTPVLRLN 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   486 EFVLGTDSFHLGYtetgHCLGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTS 565
Cdd:pfam00755 313 DYVLTDISSRLGL----PPSGDPSRSLPLPEKLEFELDPELKSAIEAAETRFDKLISDLDLRVLEFTDYGKNFIKKFKLS 388
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   566 PDAFVQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTKADLRDLFQKAAKKHQNMYR 645
Cdd:pfam00755 389 PDAFIQMALQLAYYRLHGKFAPTYESASTRKFRHGRTETIRSVTPESVAFVKAMLDPSASDEEKRELLRAAVKAHVKLTK 468
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23238254   646 LAMTGAGIDRHLFCLYLVSKYLGVSSPflaEVLSEP-------WRLSTSQIPQSQIRmfdpeqhpnhlgaGGGFGPVADD 718
Cdd:pfam00755 469 EAMTGQGVDRHLFGLKLVAKEGGLPLP---ELFSDPaykksnnWVLSTSQLGSPALR-------------GGGFGPVVPD 532
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 23238254   719 GYGVSYMIaGENTIFFHISSKFSSSETNAQRFGNHIRK 756
Cdd:pfam00755 533 GYGIGYNI-QDDSISFSISSFKSSPETDTERFAKALEE 569
CPT_N pfam16484
Carnitine O-palmitoyltransferase N-terminus; This domain is found at the N-terminus of ...
1-47 3.19e-22

Carnitine O-palmitoyltransferase N-terminus; This domain is found at the N-terminus of carnitine O-palmitoyltransferases. It functions as a regulatory domain and is linked to the catalytic domain (pfam00755) via two transmembrane regions.


Pssm-ID: 435366  Cd Length: 47  Bit Score: 89.99  E-value: 3.19e-22
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 23238254     1 MAEAHQAVAFQFTVTPDGVDFRLSREALKHVYLSGINSWKKRLIRIK 47
Cdd:pfam16484   1 MAEAHQAVAFQFTVTPEGIDVQLSHEALKEIYLSGVRSWKKRLIRFK 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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