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Conserved domains on  [gi|147904202|ref|NP_001080228.1|]
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ATPase, Na+/K+ transporting, beta 1 polypeptide

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List of domain hits

Name Accession Description Interval E-value
Potassium-transporting_ATPase_subunit_beta TIGR01107
Sodium Potassium ATPase beta subunit; This model describes the Na+/K+ ATPase beta subunit in ...
1-303 1.52e-171

Sodium Potassium ATPase beta subunit; This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients. [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273446  Cd Length: 290  Bit Score: 480.32  E-value: 1.52e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202    1 MARDKAKE---TDGGWRKFIWNADKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEFEPKYQDRVAPPG 77
Cdd:TIGR01107   1 MARGEKKScgqRMGEWKKFIWNPETKEFLGRTGGSWFKILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQDRVASPG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202   78 LTQLPRAVKTEISFSPSDSNSYQEYVKSMDNFLSKYNNEKQGSNMFEDCGTiPGPYHERGALNKDEGMKKSCVFRREWLQ 157
Cdd:TIGR01107  81 LTQRPKVQKLEISFNVSDPSSYEGYVQTLHKFLKPYNDSAQEDKNLEDCGD-PAEYKQRGPFNAPYGTKKACQFKRDWLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202  158 NCSGLNDPSYGFADGKPCVIVKLNRILAFKPVPpqnnslppemtlnyNPYVIPIHCQAKKEEDIEKIKEVKYYGMGGfaG 237
Cdd:TIGR01107 160 NCSGLNDPTFGYSEGKPCVIIKMNRIIGFKPKP--------------NPGVPPVDCTGKRDEDDENIGNVEYYPMNG--G 223
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 147904202  238 FPLTYYPYYGKLLQPDYLQPLIAVQFTNITFDAEVRIECKAYGENIDY-HDKDRFQGRFDVKFDIKS 303
Cdd:TIGR01107 224 FPLQYFPYYGKKLQPNYLQPLVAVQFTNLTMNTEVRIECKIYGENIAYsNEKDRFQGRVDFKITIKS 290
 
Name Accession Description Interval E-value
Potassium-transporting_ATPase_subunit_beta TIGR01107
Sodium Potassium ATPase beta subunit; This model describes the Na+/K+ ATPase beta subunit in ...
1-303 1.52e-171

Sodium Potassium ATPase beta subunit; This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273446  Cd Length: 290  Bit Score: 480.32  E-value: 1.52e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202    1 MARDKAKE---TDGGWRKFIWNADKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEFEPKYQDRVAPPG 77
Cdd:TIGR01107   1 MARGEKKScgqRMGEWKKFIWNPETKEFLGRTGGSWFKILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQDRVASPG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202   78 LTQLPRAVKTEISFSPSDSNSYQEYVKSMDNFLSKYNNEKQGSNMFEDCGTiPGPYHERGALNKDEGMKKSCVFRREWLQ 157
Cdd:TIGR01107  81 LTQRPKVQKLEISFNVSDPSSYEGYVQTLHKFLKPYNDSAQEDKNLEDCGD-PAEYKQRGPFNAPYGTKKACQFKRDWLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202  158 NCSGLNDPSYGFADGKPCVIVKLNRILAFKPVPpqnnslppemtlnyNPYVIPIHCQAKKEEDIEKIKEVKYYGMGGfaG 237
Cdd:TIGR01107 160 NCSGLNDPTFGYSEGKPCVIIKMNRIIGFKPKP--------------NPGVPPVDCTGKRDEDDENIGNVEYYPMNG--G 223
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 147904202  238 FPLTYYPYYGKLLQPDYLQPLIAVQFTNITFDAEVRIECKAYGENIDY-HDKDRFQGRFDVKFDIKS 303
Cdd:TIGR01107 224 FPLQYFPYYGKKLQPNYLQPLVAVQFTNLTMNTEVRIECKIYGENIAYsNEKDRFQGRVDFKITIKS 290
Na_K-ATPase pfam00287
Sodium / potassium ATPase beta chain;
1-298 2.99e-155

Sodium / potassium ATPase beta chain;


Pssm-ID: 249742  Cd Length: 289  Bit Score: 438.76  E-value: 2.99e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202    1 MARDKAKET----DGGWRKFIWNADKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEFEPKYQDRVAPP 76
Cdd:pfam00287   1 MARLKEKKScsqsMEEWKKFVWNPETGEFLGRTGSSWAKILLFYVVFYGFLAGIFTLTIWVMLQTLDDYTPKYQDRVASP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202   77 GLTQLPRAVK-TEISFSPSDSNSYQEYVKSMDNFLSKYNNEKQgSNMFEDCGtiPGPYHERGALNKDEGMKKSCVFRREW 155
Cdd:pfam00287  81 GLMIRPKVYKgLEISFNVSDPKSWQEYVHTLNEFLEPYNDSKQ-SGNFENCT--PGKYFDQGPFGAPNGEKKACQFNREW 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202  156 LQNCSGLNDPSYGFADGKPCVIVKLNRILAFKPVPPQnnslppemtlNYNPYVIPIHCQAKKEEDIEKIKEVKYYGMGGf 235
Cdd:pfam00287 158 LGNCSGLNDPTFGYSEGKPCVLIKMNRIIGFKPEPPK----------NYNSTAPPIHCTGKRAEDKDRIGNIEYFPMGG- 226
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 147904202  236 aGFPLTYYPYYGKLLQPDYLQPLIAVQFTNITFDAEVRIECKAYGENIDYHD-KDRFQGRFDVK 298
Cdd:pfam00287 227 -GFDLMYYPYYGKKLQPNYLQPLVAVKFTNLTRNVEVRVECKIYAENIKNDDpRDRFLGRVEFK 289
 
Name Accession Description Interval E-value
Potassium-transporting_ATPase_subunit_beta TIGR01107
Sodium Potassium ATPase beta subunit; This model describes the Na+/K+ ATPase beta subunit in ...
1-303 1.52e-171

Sodium Potassium ATPase beta subunit; This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273446  Cd Length: 290  Bit Score: 480.32  E-value: 1.52e-171
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202    1 MARDKAKE---TDGGWRKFIWNADKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEFEPKYQDRVAPPG 77
Cdd:TIGR01107   1 MARGEKKScgqRMGEWKKFIWNPETKEFLGRTGGSWFKILLFYLVFYGCLAGIFIGTIQVMLQTISDFTPKYQDRVASPG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202   78 LTQLPRAVKTEISFSPSDSNSYQEYVKSMDNFLSKYNNEKQGSNMFEDCGTiPGPYHERGALNKDEGMKKSCVFRREWLQ 157
Cdd:TIGR01107  81 LTQRPKVQKLEISFNVSDPSSYEGYVQTLHKFLKPYNDSAQEDKNLEDCGD-PAEYKQRGPFNAPYGTKKACQFKRDWLG 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202  158 NCSGLNDPSYGFADGKPCVIVKLNRILAFKPVPpqnnslppemtlnyNPYVIPIHCQAKKEEDIEKIKEVKYYGMGGfaG 237
Cdd:TIGR01107 160 NCSGLNDPTFGYSEGKPCVIIKMNRIIGFKPKP--------------NPGVPPVDCTGKRDEDDENIGNVEYYPMNG--G 223
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 147904202  238 FPLTYYPYYGKLLQPDYLQPLIAVQFTNITFDAEVRIECKAYGENIDY-HDKDRFQGRFDVKFDIKS 303
Cdd:TIGR01107 224 FPLQYFPYYGKKLQPNYLQPLVAVQFTNLTMNTEVRIECKIYGENIAYsNEKDRFQGRVDFKITIKS 290
Na_K-ATPase pfam00287
Sodium / potassium ATPase beta chain;
1-298 2.99e-155

Sodium / potassium ATPase beta chain;


Pssm-ID: 249742  Cd Length: 289  Bit Score: 438.76  E-value: 2.99e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202    1 MARDKAKET----DGGWRKFIWNADKKEFLGRTGGSWFKILLFYLIFYGCLAGIFIGTIQVLLLTISEFEPKYQDRVAPP 76
Cdd:pfam00287   1 MARLKEKKScsqsMEEWKKFVWNPETGEFLGRTGSSWAKILLFYVVFYGFLAGIFTLTIWVMLQTLDDYTPKYQDRVASP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202   77 GLTQLPRAVK-TEISFSPSDSNSYQEYVKSMDNFLSKYNNEKQgSNMFEDCGtiPGPYHERGALNKDEGMKKSCVFRREW 155
Cdd:pfam00287  81 GLMIRPKVYKgLEISFNVSDPKSWQEYVHTLNEFLEPYNDSKQ-SGNFENCT--PGKYFDQGPFGAPNGEKKACQFNREW 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 147904202  156 LQNCSGLNDPSYGFADGKPCVIVKLNRILAFKPVPPQnnslppemtlNYNPYVIPIHCQAKKEEDIEKIKEVKYYGMGGf 235
Cdd:pfam00287 158 LGNCSGLNDPTFGYSEGKPCVLIKMNRIIGFKPEPPK----------NYNSTAPPIHCTGKRAEDKDRIGNIEYFPMGG- 226
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 147904202  236 aGFPLTYYPYYGKLLQPDYLQPLIAVQFTNITFDAEVRIECKAYGENIDYHD-KDRFQGRFDVK 298
Cdd:pfam00287 227 -GFDLMYYPYYGKKLQPNYLQPLVAVKFTNLTRNVEVRVECKIYAENIKNDDpRDRFLGRVEFK 289
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.13
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A et al. (2009), "CDD: specific functional annotation with the Conserved Domain Database.", Nucleic Acids Res.37(D)205-10.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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