NCBI Conserved Domain Search

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Conserved domains on [gi\|117927737\|ref\|YP_872288.1\|]
diguanylate phosphodiesterase [Acidothermus cellulolyticus 11B]

Graphical summary show options »	Show site features Horizontal zoom: ×	?



List of domain hits		?

References:

Marchler-Bauer A et al. (2009), "CDD: specific functional annotation with the Conserved Domain Database.", Nucleic Acids Res.37(D)205-10.

Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.

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of the residues that compose this conserved feature have been mapped to the query sequence.

Click on the triangle to view details about the feature, including a multiple sequence alignment of your query sequence and the protein sequences used to curate the domain model, where hash marks (#) above the aligned sequences show the location of the conserved feature residues.

The thumbnail image, if present, provides an approximate view of the feature's location in 3 dimensions. Click on the triangle for interactive 3D structure viewing options.

This image shows a graphical summary of conserved domains identified on the query sequence. The Show Concise/Full Display button at the top of the page can be used to select the desired level of detail: only top scoring hits (labeled illustration) or all hits (labeled illustration).
Domains are color coded according to superfamilies to which they have been assigned. Hits with scores that pass a domain-specific threshold (specific hits) are drawn in bright colors. Others (non-specific hits) and superfamily placeholders are drawn in pastel colors.
if a domain or superfamily has been annotated with functional sites (conserved features), they are mapped to the query sequence and indicated through sets of triangles with the same color and shade of the domain or superfamily that provides the annotation.
Mouse over the colored bars or triangles to see descriptions of the domains and features. click on the bars or triangles to view your query sequence embedded in a multiple sequence alignment of the proteins used to develop the corresponding domain model.

The table lists conserved domains identified on the query sequence. Click on the plus sign (+) on the left to display full descriptions, alignments, and scores. Click on the PssmId to view the multiple sequence alignment of the proteins used to develop the corresponding domain model.

To view your query sequence embedded in that multiple sequence alignment, click on the colored bars in the Graphical Summary portion of the search results page, or click on the triangles, if present, that represent functional sites (conserved features) mapped to the query sequence.

Concise Display shows only the best scoring domain model, in each hit category listed below except non-specific hits, for each region on the query sequence. (labeled illustration)
Full Display shows all domain models, in each hit category below, that meet or exceed the RPS-BLAST threshold for statistical significance. (labeled illustration)
Four types of hits can be shown, as available, for each region on the query sequence:

specific hits meet or exceed a domain-specific e-value threshold (illustrated example) and represent a very high confidence that the query sequence belongs to the same protein family as the sequences use to create the domain model
non-specific hits meet or exceed the RPS-BLAST threshold for statistical significance (default E-value cutoff of 0.01, or an E-value selected by user via the advanced search options)
the domain superfamily to which the specific and non-specific hits belong
multi-domain models that were computationally detected and are likely to contain multiple single domains

The CD-Search help document provides more detail about the tool and its features.

Retrieve proteins that contain one or more of the domains present in the query sequence, using the Conserved Domain Architecture Retrieval Tool (CDART).

Modify your query to search against a different database and/or use advanced search options

30163

cd01948

EAL

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called...

true

false

true

240

2e-35

144.97

95.00

4,30,9,27,57,38,40,97,81,23,120,109,128

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  31 EQPRLVFQPIVDLDRAVVAGYEALARF--AVSPPVAPDVWFAAAAAGGLAAELERRVVRRVLAARSHLP---PNCFLTVN 105
cd01948       10 GEFELYYQPIVDLRTGRIVGYEALLRWrhPEGGLISPAEFIPLAEETGLIVELGRWVLEEACRQLARWQaggPDLRLSVN 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 106 VSPQALTTDDVLDEF-----RHGGDLAGIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRPE 180
cd01948       90 LSARQLRDPDFLDRLlellaETGLPPRRLVLEITESALIDDLEEALATLRRLRALGVRIALDDFGTGYSSLSYLKRLPVD 169

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 117927737 181 LMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPVD 248
cd01948      170 YLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGLKVVAEGVETEEQLELLRELGCDYVQGYLFSRPLP 237

cl00290

140582

EAL

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called...

-1

32382

COG2200

Rtn

c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms]

false

256

3e-33

138.15

92.19

5,18,4,11,31,15,26,57,43,43,100,88,20,120,113,127

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  19 CARLLPGLLRDpeQPRLVFQPIVDLDRAVVAGYEALARF--AVSPPVAPDVWFAAAAAGGLAAELERRVVRRVLAARSHL 96
COG2200        5 ERDLRQALENG--EFSLYYQPIVDLATGRIVGYEALLRWrhPDGGLISPGEFIPLAEETGLIVELGRWVLEEACRQLRTW 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  97 PPNC--FLTVNVSPQALTTDDVLDEF-----RHGGDLAGIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYS 169
COG2200       83 PRAGplRLAVNLSPVQLRSPGLVDLLlrllaRLGLPPHRLVLEITESALIDDLDTALALLRQLRELGVRIALDDFGTGYS 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 117927737 170 GLQRLVALRPELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
COG2200      163 SLSYLKRLPPDILKIDRSFVRDLETDARDQAIVRAIVALAHKLGLTVVAEGVETEEQLDLLRELGCDYLQGYLFSRPL 240

cl00290

140582

EAL

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called...

-1

109613

pfam00563

EAL

EAL domain

false

236

2e-31

132.16

94.49

6,33,13,24,57,39,39,96,84,25,121,113,16,138,129,62,201,191,45

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  34 RLVFQPIVDLDRAVVAGYEALARF--AVSPPVAPDVWFAAAAAGGLAAELERRVVRRVLAARSHL------PPNCFLTVN 105
pfam00563     14 SLYFQPIVDLRTGKVLGYEALLRWqhPDGGLIPPDEFLPLAERLGLIAELDRWVLEKALAQLAEWrgnallPPDLPLSVN 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 106 VSPQALTTDDVLDEFR----HGGDLAGIFVELTEQQhVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRPEL 181
pfam00563     94 LSPASLLDPSFLEALLalkqGGLPPSRLVLEITESD-LDEDLRLLEALARLRSLGFRLALDDFGTGYSSLSYLSRLPPDY 172

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 117927737 182 MKIDRSLVSGIDSDEAKKAcVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHP 246
pfam00563    173 IKIDRSFIKDLSDPESRAL-LRALIALARELGIKVVAEGVETEEQLELLKELGIDYVQGYLFSKP 236

cl00290

140582

EAL

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called...

-1

128367

smart00052

EAL

Putative diguanylate phosphodiesterase

false

241

9e-27

116.16

94.19

5,30,10,27,58,37,3,61,43,36,97,82,24,121,111,126

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  31 EQPRLVFQPIVDLDRAVVAGYEALARFaVSP---PVAPDVWFAAAAAGGLAAELERRVVRRVLAARSHLP---PNCFLTV 104
smart00052    11 GQFLLYYQPIVSLRTGRLVGVEALIRW-QHPeggIISPDEFIPLAEETGLIVPLGRWVLEQACQQLAEWQaqgPPLRISI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 105 NVSPQALTTDDVLDEFR-----HGGDLAGIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRP 179
smart00052    90 NLSARQLISPDLVPRVLelleeTGLPPQRLELEITESVLLDDDESAVATLQRLRELGVRIALDDFGTGYSSLSYLKRLPV 169

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 117927737 180 ELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
smart00052   170 DLLKIDKSFVRDLQTDPEDEAIVQSIIELAQKLGLQVVAEGVETPEQLDLLRSLGCDYGQGYLFSRPL 237

cl00290

140582

EAL

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called...

-1

138661

PRK11596

EAL domain-containing protein; Provisional

false

255

8e-04

40.08

34.12

1,160,156,87

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 161 MDDAGSGYSGLQRLVALRPELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQG 240
PRK11596     157 LDDFGTGMANFSALSEVRYDYIKVARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQRSPAFAAQG 236


                 ....*..
gi 117927737 241 FLLGHPV 247
PRK11596     237 YFLSRPA 243

cl00290

140582

EAL

EAL domain. This domain is found in diverse bacterial signaling proteins. It is called...

-1

34606

COG5001

Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]

Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF...

false

true

false

663

1e-20

96.25

37.71

5,12,393,23,35,418,22,57,442,63,120,510,127,247,639,4

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  13 EGSIEACARLLPGLLRDPEQPRL--VFQPIVDLDRAVVAGYEALARF--AVSPPVAPDVWFAAAAAGGLAAELERRVVRR 88
COG5001      394 EAAIRDMAVVEQALRSADLEQELsvHFQPIVDIVSGKTIALEALARWhsPEIGPVPPDVFIGIAERSGQIVELTRLLLAK 473

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  89 VLAARSHLPPNCFLTVNVSPQALTTDDVLDEF-----RHGGDLAGIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDD 163
COG5001      474 ALREARAWPMDVRVSINLSARDLASMENVRRLlaivsESCIAPHRLDFEITETAIVCDFDQARDALAALHELGVRTALDD 553

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 164 AGSGYSGLQRLVALRPELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLL 243
COG5001      554 FGTGYSSLSHLRALPLDKIKIDRSFVSDLEENPTSEDIVRTVLQLGRNLRMECVVEGVETEAQRDRVAALGATVMQGYHY 633

                        250
                 ....*....|
gi 117927737 244 GHPV--DDWR 251
COG5001      634 ARPMpaEERR 643

-1

137662

PRK10060

RNase II stability modulator; Provisional

false

true

false

663

5e-19

90.56

22.32

2,103,496,25,128,526,118

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 104 VNVSPQALTTDDVLDEFRHGGDLAG-----IFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALR 178
PRK10060     497 VNVSARQLADQTIFTALKQVLQELNfeycpIDVELTESCLIENEELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFP 576

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 117927737 179 PELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHP 246
PRK10060     577 IDAIKLDQSFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVETAKEDAFLTKNGVNERQGFLFAKP 644

-1

34551

COG4943

Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]

Predicted signal transduction protein containing sensor and EAL domains [Signal...

false

true

false

524

6e-18

86.94

42.94

5,31,280,29,60,311,36,96,350,24,120,379,17,138,396,109

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  32 QPRLVFQPIVDLDRAVVAGYEALARFAVS--PPVAPDVWFAAAAAGGLAAELERRVVRRVLAARSHL---PPNCFLTVNV 106
COG4943      281 ELCVHYQPIVDLATGKCVGAEALARWPQEdgTVVSPDVFIPLAEESGMIEQITDYVIRNVFRDLGDLlrqHRDLHVSINL 360

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 107 SPQALTTDDVLDEF-----RHGGDLAGIFVELTEQQhVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRPEL 181
COG4943      361 SASDLASPRLIDRLnrklaQYQVRPQQIALELTERT-FADPKKMTPIILRLREAGHEIYIDDFGTGYSNLHYLQSLPVDA 439

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 117927737 182 MKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
COG4943      440 LKIDKSFVDTLGTDSASHLIAPHIIEMAKSLGLKIVAEGVETEEQVDWLRKRGVHYGQGWLFSKAL 505

-1

139666

PRK13561

putative phosphodiesterase; Provisional

false

true

false

651

1e-15

79.43

23.20

4,101,487,19,120,511,50,170,564,26,199,590,48

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 102 LTVNVSPQALTTDDVLDEF-----RHGGDLAGIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSG---LQR 173
PRK13561     488 LSVNLSALQLMHPNMVADMlelltRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYAGlrqLQH 567

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 117927737 174 LVALRPELMKIDRSLVSGIDSDEakkACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
PRK13561     568 MKSLPIDVLKIDKMFVDGLPEDS---SMVAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGVAQGFLFARPL 638

-1

137979

PRK10551

hypothetical protein; Provisional

false

true

false

518

1e-14

75.86

43.63

7,30,274,27,57,303,10,68,313,27,95,345,27,122,377,14,140,391,11,151,405,95

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  31 EQPRLVFQPIVDLDRAVVAGYEALARF--AVSPPVAPDVwFAAAAAGGLAAELERRVVRRVLAARSH-----LPPNCFLT 103
PRK10551     275 EQFYVVYQPVVDTQTLRVTGLEVLLRWrhPTAGEIPPDA-FINYAEAQKLIVPLTQHLFELIARDAAelqkvLPVGAKLG 353

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 104 VNVSPQALTTDDVLDEFRH-----GGDLAGIFVELTEQqhvlDLAATHKALEE---LRQHGAMIAMDDAGSGYSGLQRLV 175
PRK10551     354 INIAPAHLHSDSFKADVQRllaslPADHFQIVLEITER----DMLQEEEALKLfawLHSQGIEIAIDDFGTGHSALIYLE 429

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 117927737 176 ALRPELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHP 246
PRK10551     430 RFTLDYLKIDRGFINAIGTETVTSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLREHGVNFLQGYWISRP 500

-1

138538

PRK11359

cAMP phosphodiesterase; Provisional

false

true

false

799

2e-14

75.65

28.41

7,31,555,26,57,587,4,61,595,7,69,602,29,101,631,15,116,653,10,128,663,119

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  32 QPRLVFQPIVDLDRAVVAGYEALARF------AVSP----PVAPDVWfAAAAAGGLAAELERRVVRRVLAARSHLPPncf 101
PRK11359     556 QLKLVYQPQIFAETGELYGIEALARWhdplhgHVPPsrfiPLAEEIG-EIENIGRWVIAEACRQLAEWRSQNIHIPA--- 631

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 102 LTVNVSPQALTTDDV-------LDEFRHGGDLagIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRL 174
PRK11359     632 LSVNLSALHFRSNQLpnqvsdaMHAWGIDGHQ--LTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRL 709

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 117927737 175 VALRPELMKIDRSLVSGIDSDEAKKACVEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
PRK11359     710 VSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPL 782

-1

138768

PRK11829

biofilm formation regulator HmsP; Provisional

false

true

false

728

3e-11

64.34

16.90

3,124,588,55,179,646,17,199,663,48

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 125 DLAGIFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRP---ELMKIDRSLVSGIDSDEakkAC 201
PRK11829     589 DPQQLLLEITETAQIQDLDEALRLLRELQGLGLLIALDDFGIGYSSLRYLNHLKSlpiHMIKLDKSFVKNLPEDD---AI 665

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 117927737 202 VEMLRVLAGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
PRK11829     666 ARIISCVSDVLKVRVMAEGVETEEQRQWLLEHGIQCGQGFLFSPPL 711

-1

137515

PRK09776

putative sensor protein; Provisional

false

true

false

1116

2e-09

58.95

10.66

1,128,983,119

                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737  129 IFVELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRPELMKIDRSLVSGIDSDEAKKACVEMLRVL 208
PRK09776      984 LHLEITETALLNHAEAASRLVQKLRLAGCRVVLDDFGRGLSSFNYLKAFMADYLKIDGELCANLQGNLMDEMLVSIINGI 1063

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 117927737  209 AGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
PRK09776     1064 AQRLGMKTIAGPVELPLTLDTLSGIGVDLAQGYVIGRPQ 1102

-1

138376

PRK11059

regulatory protein CsrD; Provisional

false

true

false

642

9e-04

39.87

18.38

2,128,521,2,131,523,116

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 129 IFvELTEQQHVLDLAATHKALEELRQHGAMIAMDDAGSGYSGLQRLVALRPELMKIDRSLVSGIDSDEAKKACVEMLRVL 208
PRK11059     522 IF-ELAEADVVQHIDRLRPVLRMLRGLGCRLAVDQAGLTVVSTSYIKELNVELIKLHPSLVRNIHQRTENQLFVRSLVGA 600

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 117927737 209 AGRLDAWLLAEGVETPEELRTLVSLEVPLAQGFLLGHPV 247
PRK11059     601 CAGTETQVFAEGVESREEWQTLQILGVSGGQGDFFASPQ 639

-1

33240

COG3434

Predicted signal transduction protein containing EAL and modified HD-GYP domains [Signal transduction mechanisms]

Predicted signal transduction protein containing EAL and modified HD-GYP domains [...

false

true

false

407

0.003

38.33

26.54

6,128,85,13,143,98,20,163,119,15,179,134,11,194,145,18,216,163,30

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 117927737 129 IFVELTEQQHVLDlaATHKALEELRQHGAMIAMDD-AGSGYSGLQRLVALRpELMKIDRSLVSgidsDEAKKACVEMLRV 207
COG3434       86 VVIEILEDCPPTE--KLLSAIKELKQKGYLLALDDfIFSNVSEWKPLLPLS-DIVKIDFKRVT----FDKARLFDRDLGY 158

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 117927737 208 LAGRLdawlLAEGVETPEELRTLVSLEVPLAQGFLLGHP 246
COG3434      159 INKKF----LAEKVETEEEFEQAKKAGFDLFQGYFFSKP 193

-1