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Conserved domains on  [gi|952188758|ref|WP_057922641|]
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nucleoside 2-deoxyribosyltransferase domain-containing protein [Lysobacter capsici]

Protein Classification

nucleoside 2-deoxyribosyltransferase domain-containing protein( domain architecture ID 11239559)

nucleoside 2-deoxyribosyltransferase domain-containing protein similar to Drosophila melanogaster protein raw, encoded by a gene member of the Class II dorsal-open group, that plays a role in restriction of epidermal signaling during dorsal closure

SCOP:  4004089

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Nuc_deoxyri_tr2 pfam15891
Nucleoside 2-deoxyribosyltransferase like;
43-147 1.27e-45

Nucleoside 2-deoxyribosyltransferase like;


:

Pssm-ID: 464926  Cd Length: 105  Bit Score: 145.86  E-value: 1.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952188758   43 RISVFLAGSIDMGGSVDWQAQVARELADEGVVLLNPRRDDWNPAWKPSAEEPEFRRQVEWELAALQRADVIAMYFAPGSQ 122
Cdd:pfam15891   1 KYSVFLAGSIFSGAETDWREDLAEALSALGITVFNPQRDDWDSSWEEDRSDPPFREQVEWELEALENADVVVFVFDGATS 80

                          90       100
                  ....*....|....*....|....*
gi 952188758  123 SPVTLLELGLHAGSGKLLLACPDGF 147
Cdd:pfam15891  81 APISLLELGLAAASGKAVVLCPTGY 105
 
Name Accession Description Interval E-value
Nuc_deoxyri_tr2 pfam15891
Nucleoside 2-deoxyribosyltransferase like;
43-147 1.27e-45

Nucleoside 2-deoxyribosyltransferase like;


Pssm-ID: 464926  Cd Length: 105  Bit Score: 145.86  E-value: 1.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952188758   43 RISVFLAGSIDMGGSVDWQAQVARELADEGVVLLNPRRDDWNPAWKPSAEEPEFRRQVEWELAALQRADVIAMYFAPGSQ 122
Cdd:pfam15891   1 KYSVFLAGSIFSGAETDWREDLAEALSALGITVFNPQRDDWDSSWEEDRSDPPFREQVEWELEALENADVVVFVFDGATS 80

                          90       100
                  ....*....|....*....|....*
gi 952188758  123 SPVTLLELGLHAGSGKLLLACPDGF 147
Cdd:pfam15891  81 APISLLELGLAAASGKAVVLCPTGY 105
 
Name Accession Description Interval E-value
Nuc_deoxyri_tr2 pfam15891
Nucleoside 2-deoxyribosyltransferase like;
43-147 1.27e-45

Nucleoside 2-deoxyribosyltransferase like;


Pssm-ID: 464926  Cd Length: 105  Bit Score: 145.86  E-value: 1.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952188758   43 RISVFLAGSIDMGGSVDWQAQVARELADEGVVLLNPRRDDWNPAWKPSAEEPEFRRQVEWELAALQRADVIAMYFAPGSQ 122
Cdd:pfam15891   1 KYSVFLAGSIFSGAETDWREDLAEALSALGITVFNPQRDDWDSSWEEDRSDPPFREQVEWELEALENADVVVFVFDGATS 80

                          90       100
                  ....*....|....*....|....*
gi 952188758  123 SPVTLLELGLHAGSGKLLLACPDGF 147
Cdd:pfam15891  81 APISLLELGLAAASGKAVVLCPTGY 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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