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Conserved domains on  [gi|493535568|ref|WP_006489522|]
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ethanolamine permease [Burkholderia cenocepacia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
2A0305 super family cl29104
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
 19-467 0e+00

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00908:

Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 591.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   19 PALQQTLGTCQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFG 98
Cdd:TIGR00908   3 RQLKKTLATWQLWGIGVGYVISGDYAGWNFGLAQGGWGGFVVATLLVATMYLTFCFSLAELSTMIPTAGGGYGFARRAFG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   99 PTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFM 178
Cdd:TIGR00908  83 PWGGFLAGTAILIEFAFAPPAIACFIGAYCESLFPVGPGWLAALVFYIVFIGINILGVGEAAKLEFVVTAVAIIALGVFI 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  179 GVVSPGFAWSNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALAIGV 258
Cdd:TIGR00908 163 GAMVPHFDSANLFNGPQTGASSFLPGAYVGVFAAIPFAIWFFLAVEGVAMAAEETKNPKRDIPRGLIGAILTLLALAAGI 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  259 MVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKVHpR 338
Cdd:TIGR00908 243 LVVGPGAADAKELMGSNNPLPEALESIYGGSTWMSQFVNLVGLFGLIASFHGIIYGYSRQIFALSRAGYLPESLSKVN-R 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  339 FKTPYRAILAGGVVGIAAIYSDEliqfggqtlTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPLYPIFPAF 418
Cdd:TIGR00908 322 KKAPVLAIVVPGVIGFGLSLTGQ---------TALIILVSVFGAIISYVLSMAAHFTLRIRRPDMERPYRTPGGILTPGV 392

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 493535568  419 AILAALVCLGTMVYFN-GLVALVFVGFLAVGYAYFLATRAQRASAPGDAL 467
Cdd:TIGR00908 393 ALVLACVALVTGFYVDpRVVVGAVAIFVVLIGYYFLYSRHHLVSGTPEEE 442
 
Name Accession Description Interval E-value
2A0305 TIGR00908
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
 19-467 0e+00

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 591.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   19 PALQQTLGTCQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFG 98
Cdd:TIGR00908   3 RQLKKTLATWQLWGIGVGYVISGDYAGWNFGLAQGGWGGFVVATLLVATMYLTFCFSLAELSTMIPTAGGGYGFARRAFG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   99 PTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFM 178
Cdd:TIGR00908  83 PWGGFLAGTAILIEFAFAPPAIACFIGAYCESLFPVGPGWLAALVFYIVFIGINILGVGEAAKLEFVVTAVAIIALGVFI 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  179 GVVSPGFAWSNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALAIGV 258
Cdd:TIGR00908 163 GAMVPHFDSANLFNGPQTGASSFLPGAYVGVFAAIPFAIWFFLAVEGVAMAAEETKNPKRDIPRGLIGAILTLLALAAGI 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  259 MVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKVHpR 338
Cdd:TIGR00908 243 LVVGPGAADAKELMGSNNPLPEALESIYGGSTWMSQFVNLVGLFGLIASFHGIIYGYSRQIFALSRAGYLPESLSKVN-R 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  339 FKTPYRAILAGGVVGIAAIYSDEliqfggqtlTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPLYPIFPAF 418
Cdd:TIGR00908 322 KKAPVLAIVVPGVIGFGLSLTGQ---------TALIILVSVFGAIISYVLSMAAHFTLRIRRPDMERPYRTPGGILTPGV 392

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 493535568  419 AILAALVCLGTMVYFN-GLVALVFVGFLAVGYAYFLATRAQRASAPGDAL 467
Cdd:TIGR00908 393 ALVLACVALVTGFYVDpRVVVGAVAIFVVLIGYYFLYSRHHLVSGTPEEE 442
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
16-459 7.34e-76

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 244.42  E-value: 7.34e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  16 SGQPALQQTLGTCQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARR 95
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  96 AFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELL 175
Cdd:COG0531   84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 176 VFMGVVSPGFAWSNFTKGGWSGadhfslGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALA 255
Cdd:COG0531  164 LFIVVGLFAFDPANFTPFLPAG------GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLY 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 256 IGVMVFAGGAGDWTKLANINDPLPQAMKYIVGanSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKV 335
Cdd:COG0531  238 ILVSLALTGVVPYDELAASGAPLADAAEAVFG--PWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKV 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 336 HPRFKTPYRAILAGGVVGIAAIysdeliqFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPlypiF 415
Cdd:COG0531  316 HPRFGTPVNAILLTGVIALLLL-------LLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVP----L 384

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 493535568 416 PAFAILAALVCLGTMVYFNGLVALVFVGFLAVGYAYFLATRAQR 459
Cdd:COG0531  385 PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
AA_permease_2 pfam13520
Amino acid permease;
25-425 1.40e-28

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 117.03  E-value: 1.40e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   25 LGTCQLWGIAVGLVISGEYFGwSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFGPTGGYL 104
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFV-APLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  105 AGAATLVEFVFAPPAIA-LAIGAYLHVQFPGLEPKHA-----AMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFM 178
Cdd:pfam13520  80 AGWSNWFAYVLGLASSAsVAASYLLSALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  179 GVVSPGFAWSNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNpkRSIPIAYVAGILTLVALAIGV 258
Cdd:pfam13520 160 IILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILV 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  259 MVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGL-FGLVASFHGIILGYSRQIFALAREGYLP--EWLAKV 335
Cdd:pfam13520 238 NIAFFGVVPDDEIALSSGLGQVAALLFQAVGGKWGAIIVVILLaLSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKV 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  336 HPrFKTPYRAILAGGVVGIAAIysdeLIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPLYPIF 415
Cdd:pfam13520 318 NK-FGSPIRAIILTAILSLILL----LLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIF 392

                         410
                  ....*....|
gi 493535568  416 PAFAILAALV 425
Cdd:pfam13520 393 GILFSLFLIV 402
frlA PRK11357
amino acid permease;
21-462 1.85e-21

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 96.46  E-value: 1.85e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  21 LQQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLGFVITALFVAAMYTT-FIFSFTELTTSIPHAGGPFAYARRAFG 98
Cdd:PRK11357   6 LQRKLGFWAVLAIAVGTTVgSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIpQMCVYAELSTAYPENGADYVYLKNAGS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  99 PTGGYLAGAATLveFVFAPPAI---ALAIGAYLHVQFP--GLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFE 173
Cdd:PRK11357  86 RPLAFLSGWASF--WANDAPSLsimALAIVSNLGFLTPidPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIP 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 174 LLVFMGVVSPGFAWSNFTKGGWSGADhfSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVA 253
Cdd:PRK11357 164 FTIVIGLGIFWFKAENFAAPTTTAIG--ATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLV 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 254 LAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLA 333
Cdd:PRK11357 242 LYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFG 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 334 KVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQ-TLTANIVTMSVFGAIVMYivsmaalfklrRSQPNLERPFRAPLY 412
Cdd:PRK11357 322 HVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYfTLVMCFKNTLTFGSIIWC-----------RKRDDYKPLWRTPAF 390

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 493535568 413 PIFPAFAILAALVCLGTMVYF---NGLVALVFVGFLAVGYAYFLATRAQRASA 462
Cdd:PRK11357 391 GLMTTLAIASSLILVASTFVWapiPGLICAVIVIATGLPAYAFWAKRSRQLNA 443
 
Name Accession Description Interval E-value
2A0305 TIGR00908
ethanolamine permease; The three genes used as the seed for this model (from Burkholderia ...
 19-467 0e+00

ethanolamine permease; The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129986 [Multi-domain]  Cd Length: 442  Bit Score: 591.43  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   19 PALQQTLGTCQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFG 98
Cdd:TIGR00908   3 RQLKKTLATWQLWGIGVGYVISGDYAGWNFGLAQGGWGGFVVATLLVATMYLTFCFSLAELSTMIPTAGGGYGFARRAFG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   99 PTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFM 178
Cdd:TIGR00908  83 PWGGFLAGTAILIEFAFAPPAIACFIGAYCESLFPVGPGWLAALVFYIVFIGINILGVGEAAKLEFVVTAVAIIALGVFI 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  179 GVVSPGFAWSNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALAIGV 258
Cdd:TIGR00908 163 GAMVPHFDSANLFNGPQTGASSFLPGAYVGVFAAIPFAIWFFLAVEGVAMAAEETKNPKRDIPRGLIGAILTLLALAAGI 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  259 MVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKVHpR 338
Cdd:TIGR00908 243 LVVGPGAADAKELMGSNNPLPEALESIYGGSTWMSQFVNLVGLFGLIASFHGIIYGYSRQIFALSRAGYLPESLSKVN-R 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  339 FKTPYRAILAGGVVGIAAIYSDEliqfggqtlTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPLYPIFPAF 418
Cdd:TIGR00908 322 KKAPVLAIVVPGVIGFGLSLTGQ---------TALIILVSVFGAIISYVLSMAAHFTLRIRRPDMERPYRTPGGILTPGV 392

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 493535568  419 AILAALVCLGTMVYFN-GLVALVFVGFLAVGYAYFLATRAQRASAPGDAL 467
Cdd:TIGR00908 393 ALVLACVALVTGFYVDpRVVVGAVAIFVVLIGYYFLYSRHHLVSGTPEEE 442
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
16-459 7.34e-76

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 244.42  E-value: 7.34e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  16 SGQPALQQTLGTCQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARR 95
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  96 AFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELL 175
Cdd:COG0531   84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 176 VFMGVVSPGFAWSNFTKGGWSGadhfslGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALA 255
Cdd:COG0531  164 LFIVVGLFAFDPANFTPFLPAG------GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLY 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 256 IGVMVFAGGAGDWTKLANINDPLPQAMKYIVGanSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKV 335
Cdd:COG0531  238 ILVSLALTGVVPYDELAASGAPLADAAEAVFG--PWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKV 315

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 336 HPRFKTPYRAILAGGVVGIAAIysdeliqFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPlypiF 415
Cdd:COG0531  316 HPRFGTPVNAILLTGVIALLLL-------LLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVP----L 384

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 493535568 416 PAFAILAALVCLGTMVYFNGLVALVFVGFLAVGYAYFLATRAQR 459
Cdd:COG0531  385 PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRH 428
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 21-442 1.60e-37

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 142.20  E-value: 1.60e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   21 LQQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLgfVITALFVAAMYTTFI-FSFTELTTSIPHAGGPFAYARRAFG 98
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIgTGIFVVTGIAAGKAGPA--VILSFVLAGLTALFIaLVYAELAAMLPVAGSPYTYAYEAMG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   99 PTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFP--GLEPKHAA-----------MGAYLVFMAL---NIVGVQIAATF 162
Cdd:TIGR00909  79 ELTAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPgvGLDLPAVLtakpgnggvfnLPALLIVLFLtyiLYLGAKESGKV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  163 ELVVTLLAIFELLVFMGVVSPGFAWSNFTkggwsgadHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPI 242
Cdd:TIGR00909 159 NDILVVLKVAALLLFAALGAIHFASNNYT--------PFMPMGFGGVGAATALVFFAFIGFEAISTAAEEVKNPERDIPK 230

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  243 AYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMhmLVWLGLFGLVASFHGIILGYSRQIFAL 322
Cdd:TIGR00909 231 AIILSLIVVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI--LTAGAVFSIASVMLAGIYGTSRVLFAM 308

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  323 AREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAiysdeliqfGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPN 402
Cdd:TIGR00909 309 SRDGLLPGSLSKVHPKTGTPHMSIIIFSLTAALL---------ASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPD 379

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 493535568  403 LERPFRAPLYPIFPAFAILAALVCLGTMVYFNGLVALVFV 442
Cdd:TIGR00909 380 IQRAFRCPLVPVLPVLVVSYCIYLLLNLGPGTTVWFLVWM 419
AA_permease_2 pfam13520
Amino acid permease;
25-425 1.40e-28

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 117.03  E-value: 1.40e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   25 LGTCQLWGIAVGLVISGEYFGwSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFGPTGGYL 104
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFV-APLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  105 AGAATLVEFVFAPPAIA-LAIGAYLHVQFPGLEPKHA-----AMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFM 178
Cdd:pfam13520  80 AGWSNWFAYVLGLASSAsVAASYLLSALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  179 GVVSPGFAWSNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNpkRSIPIAYVAGILTLVALAIGV 258
Cdd:pfam13520 160 IILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILV 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  259 MVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGL-FGLVASFHGIILGYSRQIFALAREGYLP--EWLAKV 335
Cdd:pfam13520 238 NIAFFGVVPDDEIALSSGLGQVAALLFQAVGGKWGAIIVVILLaLSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKV 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  336 HPrFKTPYRAILAGGVVGIAAIysdeLIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRAPLYPIF 415
Cdd:pfam13520 318 NK-FGSPIRAIILTAILSLILL----LLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIF 392

                         410
                  ....*....|
gi 493535568  416 PAFAILAALV 425
Cdd:pfam13520 393 GILFSLFLIV 402
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
78-452 4.74e-28

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 115.99  E-value: 4.74e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  78 ELTTSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQ 157
Cdd:COG1113   70 EMAVANPVSGSFSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVK 149

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 158 IAATFELVVTLLAIFELLVFMGV----VSPGFAWSNFTKGGWSG-ADHFSL--GAFHGMFAAIPFAIWFFLAIEGVAMAA 230
Cdd:COG1113  150 LFGEFEFWFALIKVVAIVAFIVVglllIFFGFGLPGGPPAGLSNlWDHGGFfpNGIGGVLAALQIVVFAFGGIELVGIAA 229

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 231 EEAKNPKRSIPIA-----------YVAGILTLVALAigvmvfaggagDWTKLANINDPLPQAMKYI-VGANSGWMHMLVw 298
Cdd:COG1113  230 AEAKDPEKTIPKAinsviwrillfYVGSLFVILALV-----------PWNQIGAGGSPFVTVFSLLgIPAAAGIMNFVV- 297

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 299 lgLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKVHPRfKTPYRAILAGGVVGIAAIYsdeLIQFGGQTLTANIVTMS 378
Cdd:COG1113  298 --LTAALSSLNSGLYSTSRMLYSLAERGDAPKFFGKLSKR-GVPVRAILLSAVVLLIGVV---LNYLLPEKAFTFLLSIS 371

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 379 VFGAIVMYIVSMAALFKLRRSQPNLER---PFRAPLYPIFPAFAILAALVCLGTMVYFNG-----LVALVFVGFLAVGYA 450
Cdd:COG1113  372 GFGALFVWLMILVSQLKFRRRLPREGAaalKFKMPGFPYTSYLTLAFLAAVLVLMAFDPDtrialIVGPVWLALLVVGYF 451


                 ..
gi 493535568 451 YF 452
Cdd:COG1113  452 LV 453
AA_permease pfam00324
Amino acid permease;
33-455 1.15e-24

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 106.25  E-value: 1.15e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   33 IAVGLVIS-GEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRAFGPTGGYLAGAATLV 111
Cdd:pfam00324   5 IALGGVIGtGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  112 EFVFAPPAIALAIGAYLHVQFPGLEPKHAAM---GAYLVFMALNIVGVQIAATFELVVTLLAIFELLVFM---------G 179
Cdd:pfam00324  85 SWITVLALELTAASILIQFWELVPDIPYLWVwgaVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIivgiillsgG 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  180 VVSPGFAWSNFTKGGwsGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALAIGVM 259
Cdd:pfam00324 165 NPNDGAIFRYLGDNG--GKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYILSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  260 VFAGGAGDWTKLANINDPLPQAMKYIVG----ANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLAKV 335
Cdd:pfam00324 243 LAIGLLVPWNDPGLLNDSASAASPFVIFfkflGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLKKV 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  336 hPRFKTPYRAILAGGVVGIAAIYSDEliqFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLR-----RSQPNLERPFRAP 410
Cdd:pfam00324 323 -DKRGVPLRAILVSMVISLLALLLAS---LNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRkafkyQGRSIDELPFKAP 398

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 493535568  411 LYPIFPAFAIlaALVCLGTMVYFNGLVALVFVGFLAVGYAYFLAT 455
Cdd:pfam00324 399 LGPLGVILGL--AAIIIILIIQFLYAFLPVPGGPKNWGAGSFAAA 441
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 20-424 1.28e-22

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 100.59  E-value: 1.28e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   20 ALQQTLGTCQLWGIAVGLVISGEYFGWSYG-WASAGTLGFVITALFVAAMYTTF-IFSFTELTTSIPHAGGPFAYARRAF 97
Cdd:TIGR00911  39 ALKKEITLLSGVGIIVGTIIGSGIFVSPKGvLKNAGSVGLALIMWAVCGIFSIVgALVYAELGTTIPKSGGEYNYILEVF 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   98 GPTGGYLA-GAATLVEFVFAPPAIALAIGAY-LHVQFPGLEP-----KHAAMGAYLVFMALNIVGVQIAATFELVVT--- 167
Cdd:TIGR00911 119 GPLLAFLRlWIELLVIRPGSQAVNALNFAIYiLTPVFPDCEVpewaiRLVAVLCVLLLTLVNCLSVKWATRVQDIFTack 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  168 LLAIFeLLVFMGVVSPG---FAWSNFtKGGWSGAD----HFSLGAFHGMFAaipFAIWFFLAiegvaMAAEEAKNPKRSI 240
Cdd:TIGR00911 199 LLALL-LIIITGWVQLGkggVESLNP-KNAFEGTEtsagGIVLAFYSGIWA---YGGWNYLN-----FVTEEVKNPYRTL 268

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  241 PIAyvaGILTLVALAIgVMVFaggagdwTKLANINDPLPQAM-----------KYIVGANSGWMHMLVWLGLFGlvaSFH 309
Cdd:TIGR00911 269 PIA---IIISMPIVTF-IYVL-------TNIAYFTVLSPEELlaslavavdfgERLLGVMSWAMPALVGLSCFG---SVN 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  310 GIILGYSRQIFALAREGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDE---LIQFGGqtltanivtmsvFGAIVMY 386
Cdd:TIGR00911 335 GSLFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGDiysLINLIS------------FANWLFN 402

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 493535568  387 IVSMAALFKLRRSQPNLERPFRAPLYpiFPAFAILAAL 424
Cdd:TIGR00911 403 ALAVAGLLWLRYKRPEMNRPIKVPLF--FPVFFLLSCL 438
frlA PRK11357
amino acid permease;
21-462 1.85e-21

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 96.46  E-value: 1.85e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  21 LQQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLGFVITALFVAAMYTT-FIFSFTELTTSIPHAGGPFAYARRAFG 98
Cdd:PRK11357   6 LQRKLGFWAVLAIAVGTTVgSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIpQMCVYAELSTAYPENGADYVYLKNAGS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  99 PTGGYLAGAATLveFVFAPPAI---ALAIGAYLHVQFP--GLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFE 173
Cdd:PRK11357  86 RPLAFLSGWASF--WANDAPSLsimALAIVSNLGFLTPidPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIP 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 174 LLVFMGVVSPGFAWSNFTKGGWSGADhfSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVA 253
Cdd:PRK11357 164 FTIVIGLGIFWFKAENFAAPTTTAIG--ATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLV 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 254 LAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPEWLA 333
Cdd:PRK11357 242 LYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFG 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 334 KVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQ-TLTANIVTMSVFGAIVMYivsmaalfklrRSQPNLERPFRAPLY 412
Cdd:PRK11357 322 HVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYfTLVMCFKNTLTFGSIIWC-----------RKRDDYKPLWRTPAF 390

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|...
gi 493535568 413 PIFPAFAILAALVCLGTMVYF---NGLVALVFVGFLAVGYAYFLATRAQRASA 462
Cdd:PRK11357 391 GLMTTLAIASSLILVASTFVWapiPGLICAVIVIATGLPAYAFWAKRSRQLNA 443
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 23-443 1.93e-20

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 93.58  E-value: 1.93e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   23 QTLGTCQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITALFVAAMYTTFI-FSFTELTTSIPH-AGGPFAYARRAFGPT 100
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALaFVFAILATKKPElDGGIYAYAREGFGPY 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  101 GGYLAGAATLVEFVFAPPAIALAIGAYLHVQFP---GLEPKHAAMGAYL---VFMALNIVGVQIAATFELVVTLLAIFEL 174
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPlfgSGNPVPSILGASVllwVFTFLVLRGVRQAAFINTITTIAKLIPL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  175 LVFMGVVSPGFAWSNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNpKRSIPIAYVAGILTLVAL 254
Cdd:TIGR00905 167 FLFIIIGWFWFKLDLFTADFWGHDVPSLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKN-KSDVGKATVLGTLGALVI 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  255 AIGVMVFAGGAGDWTKLANINDPlpqAMKYIVGANSG-WMHMLVWLGL-FGLVASFHGIILGYSRQIFALAREGYLPEWL 332
Cdd:TIGR00905 246 YILITLLSLGVLPQQELANLPNP---SMAAVLEMIVGkWGAVLISLGLiISVLGSLLSWTMLAAEVPFSAAKDGLFPKIF 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  333 AKVHPRfKTPYRA-ILAGGVVGIAAIysdeLIQFGGQTLTAnIVTMSVFGAIVMYIVSMAALFKL--RRSQPNLERP--- 406
Cdd:TIGR00905 323 GRVNKN-GAPSVAlLLTNILIQLFLL----LTLLTSSAYNV-LVSLAVVMILVPYLLSAAYLLKLakVGTYPKIKNRkal 396

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 493535568  407 ---FRAPLYPIFPAFAILAALVCLGTMVYFNGLVALVFVG 443
Cdd:TIGR00905 397 ivgVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRAR 436
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
18-452 3.78e-18

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 86.76  E-value: 3.78e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  18 QPALQQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRA 96
Cdd:COG0833    7 QNKLKRGLKSRHLSMIALGGVIgTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  97 FGPTGGYLAG-------AATL-VEFVfappaialAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFE----- 163
Cdd:COG0833   87 IDPAFGFAVGwnywlnwAITVaAELT--------AAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEfwfsl 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 164 ---------LVVTLLAIFEllvFMGVVSPGFawSNFTKGgwsgaDHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAK 234
Cdd:COG0833  159 ikvitviafIIVGLLMIFG---IIGGHAPGF--SNFTTG-----DGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESE 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 235 NPKRSIPIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGWMHMLVWL------GLFGLVASf 308
Cdd:COG0833  229 NPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILtavlsaGNSGLYAS- 307

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 309 hgiilgySRQIFALAREGYLPEWLAKVHPRfKTPYRAILAGGVVGIAAIYSDeliQFGGQTLTANIVTMSVFGAIVMYIV 388
Cdd:COG0833  308 -------TRMLWSLAKEGMAPKIFAKLNKR-GVPLNALLATMAVGLLALLSS---FFGAGTVYLWLLSISGLTGFIAWLG 376

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 493535568 389 SMAALFKLRR----SQPNLER-PFRAPLYPIFPAFA-ILAALVCLGTMVYFNGLVALVF-VGFLAVGYAYF 452
Cdd:COG0833  377 IAISHYRFRRayvaQGGDLEDlKYKAPLFPFGPIFAfILCLIVIIGQAFDPEQRIALYIgIPFFLACYLGY 447
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 21-403 2.11e-17

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 84.87  E-value: 2.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   21 LQQTLGTCQLWGIAVGLVI-SGEY-FGWSYGWASAG---TLGFVITALfvAAMYTtfIFSFTELTTSIPHAGGPFAYARR 95
Cdd:TIGR00906  26 MKRCLTTWDLMALGIGSTIgAGIYvLTGEVARNDSGpaiVLSFLISGL--AAVLS--GFCYAEFGARVPKAGSAYLYSYV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   96 AFGPTGGYLAGAATLVEFVFAPPAIALAIGAYL----------------HVQFPGLE--PKHAAMGAYLVFMALNIVGVQ 157
Cdd:TIGR00906 102 TVGELWAFITGWNLILEYVIGTAAVARSWSAYFdellnkqigqfrrtyfKLNYDGLAeyPDFFAVCLILLLAVLLSFGVK 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  158 IAATFELVVTLLaifELLVFMGVVSPGFAW---SNFTKGGWSGADHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAK 234
Cdd:TIGR00906 182 ESAWVNKIFTAI---NILVLLFVIIAGFTKadvANWSITEEKGAGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVK 258

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  235 NPKRSIPIAYVAgiltlvALAIGVMVFAGGAGDWT-----KLANINDPLPQAMKYiVGAnsGWMHMLVWLG-LFGLVASF 308
Cdd:TIGR00906 259 NPQRAIPIGIVT------SLLVCFVAYFLMSAALTlmmpyYLLDPDAPFPVAFEY-VGW--DPAKYIVAVGaLCGMSTSL 329

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  309 HGIILGYSRQIFALAREGYLPEWLAKVHPRFKTPYRA-ILAGGVVGIAAIYSDeliqfggqtLTANIVTMSVFGAIVMYI 387
Cdd:TIGR00906 330 LGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINAtVVSGAIAALMAFLFD---------LKALVDLLSIGTLLAYSL 400

                         410
                  ....*....|....*.
gi 493535568  388 VSMAALfkLRRSQPNL 403
Cdd:TIGR00906 401 VAACVL--ILRYQPGL 414
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 33-449 3.47e-17

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 83.87  E-value: 3.47e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   33 IAVGLVIS-GEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFA-YARRAFGPTGGYLAGAATL 110
Cdd:TIGR00913  12 IALGGTIGtGLLVGSGTALATGGPAGLLIGYAIMGSIIYCVMQSLGEMATFYPVVSGSFAtYASRFVDPAFGFAVGWNYW 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  111 VEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVT---LLAIFELLVFMGVVSPGFA- 186
Cdd:TIGR00913  92 LQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSsikILAIIGFIILSIILNCGGGp 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  187 ---------WSNftKGGWSGadHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALAIG 257
Cdd:TIGR00913 172 nhgyigfryWHD--PGAFAG--GTIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYIL 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  258 VMVFAGgagdwtKLANINDP-LPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIIL------------GYSRQIFALAR 324
Cdd:TIGR00913 248 TLFLIG------FLVPYNDPrLLSSSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILisvlsaansslyASSRTLYALAH 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  325 EGYLPEWLAKVHpRFKTPYRAIL---AGGVVGIAAIYSDELIQFggqTLTANIVTMSVF---GAIVM-YIVSMAALFKLR 397
Cdd:TIGR00913 322 QGLAPKIFAYVD-RRGVPYVAVIvssLFGLLAFLAVSKKEAEVF---TWLLNISGLSGFftwMCICLsHIRFRKAMKAQG 397

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|..
gi 493535568  398 RSQPNLerPFRAPLYPIFPAFAILAALVclgtMVYFNGLVALVFVGFLAVGY 449
Cdd:TIGR00913 398 RSLDEL--PYKSQTGPYGSYYALFFNIL----ILIAQGYVAFAPVKFSAKSF 443
PRK11021 PRK11021
putative transporter; Provisional
 74-441 5.54e-16

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 79.57  E-value: 5.54e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  74 FSFTELTTSIPHAGGPFAYARRAFGPTGGYLAGAATL-VEFVFAPPAIALAIGaYLHVQFP--GLEPKHAAMGAYLVFMA 150
Cdd:PRK11021  50 IVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWLFLsVIPVGLPAALQIAAG-FGQALFGwsSWQLLLAELLTLALLWL 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 151 LNIVGVQIAATFELVVTLL--AIFELLVFMGVVSPG-FAWSNFTKGGWSGadhfslgafhgMFAAIPFAIWFFLAIEGVA 227
Cdd:PRK11021 129 LNLRGASSSANLQTVIALLivALVVAIWWAGDIKPAdIPFPAPGSIEWSG-----------LFAALGVMFWCFVGIEAFA 197

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 228 MAAEEAKNPKRSIPIAYVAGILT--LVALAIGVMVFAGGAGDWTKLANINdpLPQAMKYIVGANSGWMHMLvwLGLFGLV 305
Cdd:PRK11021 198 HLASEFKNPERDFPRALMIGLLLagLVYWACTVVVLHFPAYGDKQAAAAS--LPGIFVQLFGGYALWVICV--IGYLACF 273

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 306 ASFHGIILGYSRQIFALAREGYLPEWLAKVHPRfKTPYRAILAggvVGIAAIYSDELIQFGGQTLTANIV-TMSVFgaIV 384
Cdd:PRK11021 274 ASVNIYTQSFARLVWSQAREGRPPSYLARLSAR-GVPVNALNA---VLGCCAVSILLIYALGLNLEALIAyANGIF--VL 347

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 493535568 385 MYIVSMAALFKLRRSqpnlerpfRAPLYPIFPAFAILAALVCLG-TMVYFNGLVALVF 441
Cdd:PRK11021 348 IYLLCMLAACKLLKG--------RYRPLAVLGCLLCLLLLVMLGwKMLYALIMLALLW 397
PRK10644 PRK10644
arginine/agmatine antiporter;
74-462 9.17e-15

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 75.98  E-value: 9.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  74 FSFTELTTSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGL-EPKHAAMGAYLV---FM 149
Cdd:PRK10644  58 MVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILkDPLVLTITCVVVlwiFV 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 150 ALNIVGVQIAATFELVVTLLAIFELLVfMGVvspgFAWSNFTKGGWSGADHFS-LGAFHGMFAAIPFAIWFFLAIEGVAM 228
Cdd:PRK10644 138 LLNIVGPKMITRVQAVATVLALIPIVG-IAV----FGWFWFRGETYMAAWNVSgLGTFGAIQSTLNVTLWSFIGVESASV 212

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 229 AAEEAKNPKRSIPIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGwmHMLVWLGLFGLVASF 308
Cdd:PRK10644 213 AAGVVKNPKRNVPIATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAG--AIVSFCAAAGCLGSL 290

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 309 HGIILGYSRQIFALAREGYLPEWLAKVHPRfKTPYRAILAGGV----VGIAAIYSDELIQFGgqtltaNIVTMSVFGAIV 384
Cdd:PRK10644 291 GGWTLLAGQTAKAAADDGLFPPIFARVNKA-GTPVAGLLIVGVlmtiFQLSSISPNASKEFG------LVSSVSVIFTLV 363

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 493535568 385 MYIVSMAALFKLRRSQPNLERPFRAPLYPIFPAFAILAALVCLGTMVYFnglvALVFVGFLAVGYAYFLATRAQRASA 462
Cdd:PRK10644 364 PYLYTCAALLLLGHGHFGKARPAYLAVTLIAFVYCIWAVVGSGAKEVMW----SFVTLMVITAFYALNYNRLHKNPYP 437
PRK10249 PRK10249
phenylalanine transporter; Provisional
 16-449 1.27e-13

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 72.71  E-value: 1.27e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  16 SGQPALQQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLgfVITALFVAAMYTTFIF-SFTELTTSIPHAGGPFAYA 93
Cdd:PRK10249  14 NQEPTLHRGLHNRHIQLIALGGAIgTGLFLGIGPAIQMAGPA--VLLGYGVAGIIAFLIMrQLGEMVVEEPVSGSFAHFA 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  94 RRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELvvtLLAIFE 173
Cdd:PRK10249  92 YKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEF---WFALIK 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 174 LLVFMGVVSPGFaWSNFTKGG---------WSGADHFSLGaFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAY 244
Cdd:PRK10249 169 VLAIIGMIGFGL-WLLFSGHGgekasidnlWRYGGFFATG-WNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAV 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 245 VAGILTLVALAIGVMVFAGGAGDWTKLAniNDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAR 324
Cdd:PRK10249 247 NQVVYRILLFYIGSLVVLLALYPWVEVK--SNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSV 324

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 325 EGYLPEWLAKVHPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSqpNLE 404
Cdd:PRK10249 325 QGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQ--GRE 402

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 493535568 405 RPFRAPLYP----IFPAF-AILAALVCLGTMVYFNGLVALVFVGFLAVGY 449
Cdd:PRK10249 403 TQFKALLYPfgnyLCIAFlGMILLLMCTMDDMRLSAILLPVWIVFLFVAF 452
PRK10238 PRK10238
aromatic amino acid transporter AroP;
20-460 3.88e-12

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 68.06  E-value: 3.88e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  20 ALQQTLGTCQLWGIAVglVISGEYFGWSYGWASAGTLGFVItalfvaamyttfIFSFTELTTSIPHAGGPFAYARRAFGP 99
Cdd:PRK10238  23 ALGGAIGTGLFLGSAS--VIQSAGPGIILGYAIAGFIAFLI------------MRQLGEMVVEEPVAGSFSHFAYKYWGS 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 100 TGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFEL---------VVTLLA 170
Cdd:PRK10238  89 FAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFwfaiikviaVVAMII 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 171 IFELLVFMGVVSPGFAWSNFTKGGwsgadHFSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILT 250
Cdd:PRK10238 169 FGGWLLFSGNGGPQATVSNLWDQG-----GFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYR 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 251 LVALAIGVMVFAGGAGDWTKLAniNDPLPQAMKYIVGANSGWMHMLVWLGLFGLVASFHGIILGYSRQIFALAREGYLPE 330
Cdd:PRK10238 244 ILIFYIGSLAVLLSLMPWTRVT--ADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPK 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 331 WLAKVHPRfKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVfgAIVMYIVSMAAL-FKLRRSQPNLERPFRA 409
Cdd:PRK10238 322 ALASVDKR-GVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSAL--VINWAMISLAHMkFRRAKQEQGVVTRFPA 398

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 493535568 410 PLYPIFPAFAILAALVCLGTMVYFNGL---VALVFVGFLAVGYAYFLATRAQRA 460
Cdd:PRK10238 399 LLYPLGNWICLLFMAAVLVIMLMTPGMaisVYLIPVWLIVLGIGYLFKEKTAKA 452
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 13-401 5.78e-10

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 61.30  E-value: 5.78e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   13 AKLSGQPALQQTLGTCQLWGIAVGlvISGEYFG----WSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGG 88
Cdd:TIGR00907   2 VALGYKPELKREFSLWSIFGFAFS--ISNSWTGisttYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568   89 PF----AYARRAFGPTGGYLAGAATLVEFVFAPPAIALA----IGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQI-- 158
Cdd:TIGR00907  80 QYfwsaKLAPPRQMPFASWMTGWFNLAGQVAGTASTDLSvaqlILGIVSLTTPGREYIPTRWHIFGIMIGIHLIHALIns 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  159 --AATFELVVTLLAIFELLVFMGVV------------SPGFAWSNF---TKGGWSGADHFSLGAFHGMfaaipfaiWFFL 221
Cdd:TIGR00907 160 lpTKWLPRITSSAAYWSLLGFLTICitllackspkfnDGKFVFTNFnnsTGGWKPGGFAFLLGLLNPA--------WSMT 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  222 AIEGVAMAAEEAKNPKRSIPIAYVAGI-LTLVALAIGVMVFAGGAGDWTKLanINDPLPQAMKYIVGANSGWMHMLVWLG 300
Cdd:TIGR00907 232 GYDGTAHMAEEIENPEVVGPRAIIGAVaIGIVTGFCFNIVLFFSMGDIDSL--ISSTTGQPIAQIFYNALGNKAGAIFLL 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  301 LFGLVASFHGIILGY---SRQIFALAREGYLP--EWLAKVHPRFKTPYRAILAGGVVGIAAiysdELIQFGGQTLTANIV 375
Cdd:TIGR00907 310 CLILVTSFFCAITCMtanSRMIYAFSRDGGLPfsPLWSRVNPRTQVPLNAVWLSAVWIILI----GLLGLGSSTAFQAIF 385

                         410       420
                  ....*....|....*....|....*.
gi 493535568  376 TMSVFGAIVMYIVSMAALFKLRRSQP 401
Cdd:TIGR00907 386 SVCTVALDVSYVIPIICKLAKGRNTI 411
PRK11387 PRK11387
S-methylmethionine permease;
18-428 3.46e-09

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 58.71  E-value: 3.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  18 QPALQQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLGFVITALFVAAMYTTFIFSFTELTTSIPHAGGPFAYARRA 96
Cdd:PRK11387   9 AGQFKRTMKVRHLVMLSLGGVIgTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  97 FGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLV 176
Cdd:PRK11387  89 LGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTILA 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 177 F-------------MGVVSPGFAWSNFTKGGWsgADHFSLGAFHGMfAAIPFAiwfFLAIEGVAMAAEEAKNPKRSIPIA 243
Cdd:PRK11387 169 FivlggaaifgfipMQDGSPAPGLRNLTAEGW--FPHGGLPILMTM-VAVNFA---FSGTELIGIAAGETENPAKVIPVA 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 244 YVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYIVGANSGwmHMLVWLGLFGLVASFHGIILGYSRQIFALA 323
Cdd:PRK11387 243 IRTTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAA--DIFNFVILTAILSAANSGLYASGRMLWSLS 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 324 REGYLPEWLAKVHPRfKTPYRAILAGGVVGIAAIYSDeliQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRR----- 398
Cdd:PRK11387 321 NEGTLPACFARLTKR-GIPLTALSVSMLGGLLALFSS---VVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRrhlrd 396

                        410       420       430
                 ....*....|....*....|....*....|.
gi 493535568 399 SQPNLERPFRAPLYPIFPAFA-ILAALVCLG 428
Cdd:PRK11387 397 GKALSELAYRAPWYPLTPILGfVLCLLACVG 427
potE PRK10655
putrescine transporter; Provisional
 87-398 8.35e-08

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 54.27  E-value: 8.35e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  87 GGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFP-GLEPKHAAMGAYLVF---MALNIVGVQIAATF 162
Cdd:PRK10655  69 GGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELFGaTLSPVQICLATIGVLwlcTVANFGGARITGQI 148

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 163 ElVVTLLAIFELLVFMGVVspGFAWSNFTKGGWSGADHfSLGAFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPI 242
Cdd:PRK10655 149 S-SVTVWGVIIPVVGLSII--GWFWFSPSLYVAAWNPH-HLPFFSAVGSSIAMTLWAFLGLESACANSDAVENPERNVPI 224

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 243 AYVAGilTLVALAIGVM---VFAGGAGDwTKLANINDPLPQAMKYIVGANSGWMHMlvwlGLfgLVASFHGIILGYS--- 316
Cdd:PRK10655 225 AVLGG--TLGAAVIYIVstnVIAGIVPN-MELANSTAPFGLAFAQMFNPTVGKIVM----AL--MVMSCCGSLLGWQfti 295

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 317 RQIF-ALAREGYLPEWLAKVHPRfKTPYRAILAGGVV----GIAAIYSDELIQFggqtltANIVTMSVFGAIVMYIVSMA 391
Cdd:PRK10655 296 AQVFkSSADEGYFPKIFSRVTKV-DAPVQGMLIIVVIqsllSLMTISPSLNSQF------NVLVNLAVVTNIIPYILSMA 368


                 ....*..
gi 493535568 392 ALFKLRR 398
Cdd:PRK10655 369 ALVIIQK 375
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 98-243 1.47e-07

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 53.58  E-value: 1.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  98 GPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAATFEL---------VVTL 168
Cdd:PRK11049  95 GPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFwfamikivaIVAL 174

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 493535568 169 LAIFELLVFMGVVSPGFAWSNFTKGgWSGADHFSLGAfHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIA 243
Cdd:PRK11049 175 IVVGLVMVAMHFQSPTGVEASFAHL-WNDGGMFPKGL-SGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRA 247
PRK15049 PRK15049
L-asparagine permease;
22-432 1.07e-06

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 50.77  E-value: 1.07e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  22 QQTLGTCQLWGIAVGLVI-SGEYFGWSYGWASAGTLgfVITALFVAAMYTTFIF-SFTELTTSIPHAGGPFAYARRAFGP 99
Cdd:PRK15049  27 HKAMGNRQVQMIAIGGAIgTGLFLGAGARLQMAGPA--LALVYLICGLFSFFILrALGELVLHRPSSGSFVSYAREFLGE 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 100 TGGYLAGAATLVEFVFAPPAIALAIGAYLHV--QFPGLEPKHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVF 177
Cdd:PRK15049 105 KAAYVAGWMYFINWAMTGIVDITAVALYMHYwgAFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTF 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 178 MgVVSPGFAWSNFTKGGWSGADHFSL--GAF--HGMFAAIPF---AIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILT 250
Cdd:PRK15049 185 L-VVGTVFLGSGQPLDGNTTGFHLITdnGGFfpHGLLPALVLiqgVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWR 263

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 251 LVALAIGVMVFAGGAGDWTKLANINDPLPQAM-KYIVGANSGWMHMLVwlgLFGLVASFHGIILGYSRQIFALAREGYLP 329
Cdd:PRK15049 264 IGLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFsKLGVPYIGSIMNIVV---LTAALSSLNSGLYCTGRILRSMAMGGSAP 340

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 330 EWLAKVhPRFKTPYRAILAGGVVGIAAIYSDELIQFGGQTLTANIVTMSVFGAIVMYIVSMAALFKLRRSQPNLERPFRA 409
Cdd:PRK15049 341 SFMAKM-SRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKL 419

                        410       420
                 ....*....|....*....|...
gi 493535568 410 PLYPIFPAFAILAALVCLGTMVY 432
Cdd:PRK15049 420 PGAPFTSWLTLLFLLSVLVLMAF 442
proY PRK10580
putative proline-specific permease; Provisional
 78-451 1.27e-06

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 50.59  E-value: 1.27e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  78 ELTTSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQ 157
Cdd:PRK10580  64 EMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVK 143

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 158 IAATFELVVTLLAIFELLVfMGVVSPGFAWSNFTKGG--------WSGADHFSLGaFHGMFAAIPFAIWFFLAIEGVAMA 229
Cdd:PRK10580 144 VFGELEFWFSFFKVATIII-MIVAGIGIIIWGIGNGGqptgihnlWSNGGFFSNG-WLGMVMSLQMVMFAYGGIEIIGIT 221

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 230 AEEAKNPKRSIPIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYI-VGANSGWMHMLVwlglfgLVASF 308
Cdd:PRK10580 222 AGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMgITFAASILNFVV------LTASL 295

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 309 HGI---ILGYSRQIFALAREGYLPEWLAKVHPRfKTPYRAILAGGVVGIAAIYSDELIQfggQTLTANIVTMSVFGAIVM 385
Cdd:PRK10580 296 SAInsdVFGVGRMLHGMAEQGSAPKIFSKTSRR-GIPWVTVLVMTTALLFAVYLNYIMP---ENVFLVIASLATFATVWV 371

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 493535568 386 YIVSMAALFKLRRSQPNLER---PFRAPLYPIFPAFAILAALVCLGTMVYFNGLVALVFVGF-----LAVGYAY 451
Cdd:PRK10580 372 WIMILLSQIAFRRRLPPEEVkalKFKVPGGVATTIGGLIFLVFIIGLIGYHPDTRISLYVGFawivlLLIGWMF 445
cadB PRK10435
cadaverine/lysine antiporter;
65-247 2.50e-05

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 46.67  E-value: 2.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  65 VAAMYTTFIFSftELTTSIPHAGGPFAYARRaFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGL-EPKHAAMG 143
Cdd:PRK10435  48 IGAMSLAYVYA--RLATKNPQQGGPIAYAGE-ISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLnDPIPAGIA 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 144 AYLVFMALNIVGVQIAATFELVVTLLAIFELLVFMGVVSPGFAWSNFT--KGGWSGADHFSLgafHGMFAAIPFAIWFFL 221
Cdd:PRK10435 125 CIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVGTAIVGWHWFDAAtyAANWNTSDTTDG---HAIIKSILLCLWAFV 201

                        170       180
                 ....*....|....*....|....*.
gi 493535568 222 AIEGVAMAAEEAKNPKRSIPIAYVAG 247
Cdd:PRK10435 202 GVESAAVSTGMVKNPKRTVPLATMLG 227
PRK10746 PRK10746
putative transport protein YifK; Provisional
 59-452 1.29e-03

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 40.96  E-value: 1.29e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568  59 VITALFVAAMYTTFIF-SFTELTTSIPHAGGPFAYARRAFGPTGGYLAGAATLVEFVFAPPAIALAIGAYLHVQFPGLEP 137
Cdd:PRK10746  45 VLLAYIIAGLFVFFIMrSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQ 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 138 KHAAMGAYLVFMALNIVGVQIAATFELVVTLLAIFELLVfMGVVSPGFAWSNFTKGGWS-GADH------FSLGAFHGMF 210
Cdd:PRK10746 125 WIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIV-MIVIGLGVIFFGFGNGGQSiGFSNltehggFFAGGWKGFL 203

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 211 AAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIAYVAGILTLVALAIGVMVFAGGAGDWTKLANINDPLPQAMKYI-VGAN 289
Cdd:PRK10746 204 TALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIgITAA 283

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 290 SGWMHMLVwlglfgLVASFHGIILG-YS--RQIFALAREGYLPEWLAKVhPRFKTPYRAILAGGVVGIAAIYSDELIQfG 366
Cdd:PRK10746 284 AGIINFVV------LTAALSGCNSGmYScgRMLYALAKNRQLPAAMAKV-SRHGVPVAGVAVSILILLVGSCLNYIIP-N 355

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 493535568 367 GQTLTANIVTMSVFGAIVMYIVSMAALFKLRRS--QPNLERPFRAPLYPiFPAFAILAALVCLGTMVYFNG------LVA 438
Cdd:PRK10746 356 PQRVFVYVYSASVLPGMVPWFVILISQLRFRRAhkAAIASHPFRSILFP-WANYLTMAFLICVLIGMYFNEdtrmslFVG 434

                        410
                 ....*....|....
gi 493535568 439 LVFVGFLAVGYAYF 452
Cdd:PRK10746 435 IIFLLAVTLIYKVF 448
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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