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Conserved domains on  [gi|1578295475|emb|VFI51217|]
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PTS system sugar-specific transporter subunit EII [Streptococcus pneumoniae]

Protein Classification

PTS sugar transporter subunit IIA( domain architecture ID 10006772)

PTS mannose/fructose/sorbose family sugar transporter subunit IIA is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), which catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ManX COG2893
Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and ...
3-124 3.82e-39

Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism];


:

Pssm-ID: 442138 [Multi-domain]  Cd Length: 126  Bit Score: 128.33  E-value: 3.82e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAIS---NEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:COG2893     1 IVIATHGPLAEGLLSSAEMILGEQENVEAVDLYPGDDPEDLREKLEEAIAeldSGDGVLILTDLFGGTPSNVAARLLAKH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1578295475  80 PakTMNVLSGLNLAMLMEAVFARMAHSFDEVVNKSVVAAQGGVVN 124
Cdd:COG2893    81 E--NVEVIAGVNLPMLLEALTYREDLSLDELVEKALEAGREGIKS 123
 
Name Accession Description Interval E-value
ManX COG2893
Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and ...
3-124 3.82e-39

Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism];


Pssm-ID: 442138 [Multi-domain]  Cd Length: 126  Bit Score: 128.33  E-value: 3.82e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAIS---NEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:COG2893     1 IVIATHGPLAEGLLSSAEMILGEQENVEAVDLYPGDDPEDLREKLEEAIAeldSGDGVLILTDLFGGTPSNVAARLLAKH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1578295475  80 PakTMNVLSGLNLAMLMEAVFARMAHSFDEVVNKSVVAAQGGVVN 124
Cdd:COG2893    81 E--NVEVIAGVNLPMLLEALTYREDLSLDELVEKALEAGREGIKS 123
AgaF NF040761
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;
3-123 2.39e-38

PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;


Pssm-ID: 468721  Cd Length: 144  Bit Score: 126.83  E-value: 2.39e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKI---LLAISNEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:NF040761    4 IILTGHGGFASGLESAVEQIIGEQPQFIAIDFPESMSTAQLEAQLeqaLAELDSGEGVVFLTDLLGGSPFRVASTLALQR 83
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1578295475  80 PakTMNVLSGLNLAMLMEAVFARMAHSFDEVVNKSVVAAQGGVV 123
Cdd:NF040761   84 P--NIEVITGTNLQMLLEMLLERDGLSLEEFRDQALECGHRGIT 125
PTS_IIA_man cd00006
PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: ...
1-119 8.30e-36

PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.


Pssm-ID: 237978 [Multi-domain]  Cd Length: 122  Bit Score: 119.63  E-value: 8.30e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   1 MKIVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAIS---NEEEVLILSDLLGGSPFKVSSTIMG 77
Cdd:cd00006     1 VGIIIATHGGFASGLLNSAEMILGEQENVEAIDFPPGESPDDLLEKIKAALAeldSGEGVLILTDLFGGSPNNAAARLSM 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1578295475  78 ENPakTMNVLSGLNLAMLMEAVFARM-AHSFDEVVNKSVVAAQ 119
Cdd:cd00006    81 EHP--PVEVIAGVNLPMLLEAARARElGLSLDELVENALEAGR 121
EIIA-man pfam03610
PTS system fructose IIA component;
2-113 4.91e-30

PTS system fructose IIA component;


Pssm-ID: 427399 [Multi-domain]  Cd Length: 113  Bit Score: 104.64  E-value: 4.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   2 KIVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAISN---EEEVLILSDLLGGSPFKVSSTIMGE 78
Cdd:pfam03610   1 GIVIVSHGELAEGLLELAEMMAGEQENVIAVGGTPGESIGTSFEKIVEAIENldsGDGVLVLVDLGGATPNNEAALELLE 80
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1578295475  79 NPAktMNVLSGLNLAMLMEAVFARMAHSFDEVVNK 113
Cdd:pfam03610  81 KER--MEVITGVNLPMVEGAYAARVSASLGELVEA 113
PRK15088 PRK15088
PTS system mannose-specific transporter subunits IIAB; Provisional
3-122 5.03e-17

PTS system mannose-specific transporter subunits IIAB; Provisional


Pssm-ID: 185045 [Multi-domain]  Cd Length: 322  Bit Score: 75.42  E-value: 5.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQK---ILLAISNEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:PRK15088    5 IIIGTHGWAAEQLLKTAEMLLGEQENVAWIDFVPGENAETLIEKynaQLAKLDTSKGVLFLVDTWGGSPFNAASRIVVDK 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1578295475  80 paKTMNVLSGLNLAMLMEAVFAR-MAHSFDEVVNKSVVAAQGGV 122
Cdd:PRK15088   85 --ENYEVITGVNIPMLVETFMARdDDPSFDELVAIALETGREGV 126
 
Name Accession Description Interval E-value
ManX COG2893
Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and ...
3-124 3.82e-39

Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism];


Pssm-ID: 442138 [Multi-domain]  Cd Length: 126  Bit Score: 128.33  E-value: 3.82e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAIS---NEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:COG2893     1 IVIATHGPLAEGLLSSAEMILGEQENVEAVDLYPGDDPEDLREKLEEAIAeldSGDGVLILTDLFGGTPSNVAARLLAKH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1578295475  80 PakTMNVLSGLNLAMLMEAVFARMAHSFDEVVNKSVVAAQGGVVN 124
Cdd:COG2893    81 E--NVEVIAGVNLPMLLEALTYREDLSLDELVEKALEAGREGIKS 123
AgaF NF040761
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;
3-123 2.39e-38

PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;


Pssm-ID: 468721  Cd Length: 144  Bit Score: 126.83  E-value: 2.39e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKI---LLAISNEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:NF040761    4 IILTGHGGFASGLESAVEQIIGEQPQFIAIDFPESMSTAQLEAQLeqaLAELDSGEGVVFLTDLLGGSPFRVASTLALQR 83
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1578295475  80 PakTMNVLSGLNLAMLMEAVFARMAHSFDEVVNKSVVAAQGGVV 123
Cdd:NF040761   84 P--NIEVITGTNLQMLLEMLLERDGLSLEEFRDQALECGHRGIT 125
PTS_IIA_man cd00006
PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: ...
1-119 8.30e-36

PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.


Pssm-ID: 237978 [Multi-domain]  Cd Length: 122  Bit Score: 119.63  E-value: 8.30e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   1 MKIVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAIS---NEEEVLILSDLLGGSPFKVSSTIMG 77
Cdd:cd00006     1 VGIIIATHGGFASGLLNSAEMILGEQENVEAIDFPPGESPDDLLEKIKAALAeldSGEGVLILTDLFGGSPNNAAARLSM 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1578295475  78 ENPakTMNVLSGLNLAMLMEAVFARM-AHSFDEVVNKSVVAAQ 119
Cdd:cd00006    81 EHP--PVEVIAGVNLPMLLEAARARElGLSLDELVENALEAGR 121
EIIA-man pfam03610
PTS system fructose IIA component;
2-113 4.91e-30

PTS system fructose IIA component;


Pssm-ID: 427399 [Multi-domain]  Cd Length: 113  Bit Score: 104.64  E-value: 4.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   2 KIVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQKILLAISN---EEEVLILSDLLGGSPFKVSSTIMGE 78
Cdd:pfam03610   1 GIVIVSHGELAEGLLELAEMMAGEQENVIAVGGTPGESIGTSFEKIVEAIENldsGDGVLVLVDLGGATPNNEAALELLE 80
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1578295475  79 NPAktMNVLSGLNLAMLMEAVFARMAHSFDEVVNK 113
Cdd:pfam03610  81 KER--MEVITGVNLPMVEGAYAARVSASLGELVEA 113
PRK15088 PRK15088
PTS system mannose-specific transporter subunits IIAB; Provisional
3-122 5.03e-17

PTS system mannose-specific transporter subunits IIAB; Provisional


Pssm-ID: 185045 [Multi-domain]  Cd Length: 322  Bit Score: 75.42  E-value: 5.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578295475   3 IVLVGHGHFATGIYSSLQLIAGNQENVEAIDFVEGMSADELKQK---ILLAISNEEEVLILSDLLGGSPFKVSSTIMGEN 79
Cdd:PRK15088    5 IIIGTHGWAAEQLLKTAEMLLGEQENVAWIDFVPGENAETLIEKynaQLAKLDTSKGVLFLVDTWGGSPFNAASRIVVDK 84
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1578295475  80 paKTMNVLSGLNLAMLMEAVFAR-MAHSFDEVVNKSVVAAQGGV 122
Cdd:PRK15088   85 --ENYEVITGVNIPMLVETFMARdDDPSFDELVAIALETGREGV 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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