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Conserved domains on  [gi|344335850|gb|AEN17811|]
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threonine synthase [Helicobacter pylori Puno135]

Protein Classification

threonine synthase( domain architecture ID 10107520)

threonine synthase catalyzes the final step of threonine biosynthesis, the gamma-elimination of phosphate from L-phosphohomoserine and the beta-addition of water to produce L-threonine

EC:  4.2.3.1
Gene Ontology:  GO:0030170|GO:0004795

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Thr-synth_2 cd01560
Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of ...
3-476 0e+00

Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.


:

Pssm-ID: 107203 [Multi-domain]  Cd Length: 460  Bit Score: 568.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   3 FAPTRSlKEKKIDFIEAILNPNAPKGGLYTLEHFETLEWQDC---LNLSYNELVECVFERL-GLEIPKGLLTSALKRYEN 78
Cdd:cd01560    2 YVSTRG-GNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIaswSGLSYQELAFEVLSLFiGDEIPEDDLKSLIDRAYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  79 FDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLMLVSTSGDTGPATLESLAGMPNVFVV 158
Cdd:cd01560   81 FFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 159 CLYPKDGTSLVQKLQMVTQSASNLKVFGISGDFDDAQNALKNLLKDDDFNnalkaCQLKLSVANSVNFGRIAFQIVYHIW 238
Cdd:cd01560  161 VLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFN-----KKLKLSSANSINWARILAQIVYYFY 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 239 GFLELYKKGainSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNSNDVLREFIETGRYDLtHRSLKQTYSPAMD 318
Cdd:cd01560  236 AYLQLLKRG---EGEKVEFSVPTGNFGNILAGYYAKKMGLPIKKLIVATNENDVLRRFFKTGRYDR-RESLKQTLSPAMD 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 319 ILKSSNVERVLFDLFGFER--TLEWMQALEEEKFYALKPKELALLQEHFSCASCSDEACLKTIQKVYAEHQYLIDPHTAT 396
Cdd:cd01560  312 ILKSSNFERLLFLLAGRDRtkVKMLMEEFEATGFLSLPKEELKKLREDFSSGSVSDEETLETIREVYEETGYLIDPHTAV 391
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 397 ALNASLKT----NEKTLVSATASYEKFPSTTLLALSDQKkndndktaletlknsynTPDSQRLDDLFEKGIKHQEVLK-L 471
Cdd:cd01560  392 GVRAAERVrkspGTPGVVLSTAHPAKFPEAVKEALGEEP-----------------VELPEELEGLEDLEKRHEDLLAdK 454

                 ....*
gi 344335850 472 NEIKS 476
Cdd:cd01560  455 ELLKS 459
 
Name Accession Description Interval E-value
Thr-synth_2 cd01560
Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of ...
3-476 0e+00

Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.


Pssm-ID: 107203 [Multi-domain]  Cd Length: 460  Bit Score: 568.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   3 FAPTRSlKEKKIDFIEAILNPNAPKGGLYTLEHFETLEWQDC---LNLSYNELVECVFERL-GLEIPKGLLTSALKRYEN 78
Cdd:cd01560    2 YVSTRG-GNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIaswSGLSYQELAFEVLSLFiGDEIPEDDLKSLIDRAYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  79 FDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLMLVSTSGDTGPATLESLAGMPNVFVV 158
Cdd:cd01560   81 FFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 159 CLYPKDGTSLVQKLQMVTQSASNLKVFGISGDFDDAQNALKNLLKDDDFNnalkaCQLKLSVANSVNFGRIAFQIVYHIW 238
Cdd:cd01560  161 VLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFN-----KKLKLSSANSINWARILAQIVYYFY 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 239 GFLELYKKGainSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNSNDVLREFIETGRYDLtHRSLKQTYSPAMD 318
Cdd:cd01560  236 AYLQLLKRG---EGEKVEFSVPTGNFGNILAGYYAKKMGLPIKKLIVATNENDVLRRFFKTGRYDR-RESLKQTLSPAMD 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 319 ILKSSNVERVLFDLFGFER--TLEWMQALEEEKFYALKPKELALLQEHFSCASCSDEACLKTIQKVYAEHQYLIDPHTAT 396
Cdd:cd01560  312 ILKSSNFERLLFLLAGRDRtkVKMLMEEFEATGFLSLPKEELKKLREDFSSGSVSDEETLETIREVYEETGYLIDPHTAV 391
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 397 ALNASLKT----NEKTLVSATASYEKFPSTTLLALSDQKkndndktaletlknsynTPDSQRLDDLFEKGIKHQEVLK-L 471
Cdd:cd01560  392 GVRAAERVrkspGTPGVVLSTAHPAKFPEAVKEALGEEP-----------------VELPEELEGLEDLEKRHEDLLAdK 454

                 ....*
gi 344335850 472 NEIKS 476
Cdd:cd01560  455 ELLKS 459
thrC TIGR00260
threonine synthase; Involved in threonine biosynthesis it catalyses the reaction ...
55-436 1.92e-103

threonine synthase; Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 272986 [Multi-domain]  Cd Length: 327  Bit Score: 312.01  E-value: 1.92e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   55 CVFERLGLEIP-KGLLTSALKRYENFDNPKNPAPIFALNerLFVQELYHGPSLAFKDMALqplASLFSNLAVGKNEkyLM 133
Cdd:TIGR00260   1 VWRYREFLPVTeKDLVDLGEGVTPLFRAPALAANVGIKN--LYVKELGHNPTLSFKDRGM---AVALTKALELGND--TV 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  134 LVSTSGDTGPATLeSLAGMPNVFVVCLYPKDGTSlvqKLQMVTQSASNLKVFGISGDFDDAQNALKNLLKDDDfnnalka 213
Cdd:TIGR00260  74 LCASTGNTGAAAA-AYAGKAGLKVVVLYPAGKIS---LGKLAQALGYNAEVVAIDGNFDDAQRLVKQLFEDKP------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  214 cQLKLSVANSVnFGRIAFQIvYHIWGFLELYKKgaiNSKEKITLAIP-SGNFGNALGAFYAKKMG----LNIaKIKVVTN 288
Cdd:TIGR00260 143 -ALGLNSANSI-PYRLEGQK-TYAFEAVEQLGW---EAPDKVVVPVPnSGNFGAIWKGFKEKKMLgldsLPV-KRGIQAE 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  289 SN-DVLREFIETGRyDLTHRSlKQTYSPAMDILKSSNVERVLFdlfGFERTLEWMQALeeekfyalkpkelallqehfsc 367
Cdd:TIGR00260 216 GAaDIVRAFLEGGQ-WEPIET-PETLSTAMDIGNPANWPRALE---AFRRSNGYAEDL---------------------- 268
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344335850  368 ascSDEACLKTIQKVYAEHQYLIDPHTATALNASLKTNEKTlvsaTASYEKfpsTTLLALSDQKKNDND 436
Cdd:TIGR00260 269 ---SDEEILEAIKLLAREEGYFVEPHSAVAVAALLKLVEKG----TADPAE---RVVCALTGNGLKDPE 327
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
90-441 6.60e-69

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 225.08  E-value: 6.60e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  90 ALNERLFVQELYHGPSLAFKDMALQPLASLFsnLAVGKnekYLMLVSTSGdTGPATLESLAGMPNVFVVCLYPKDGTSLV 169
Cdd:COG0498   78 ELGKNLYVKEEGHNPTGSFKDRAMQVAVSLA--LERGA---KTIVCASSG-NGSAALAAYAARAGIEVFVFVPEGKVSPG 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 170 QKLQMVTQSAsnlKVFGISGDFDDAQNALKNLLKDDDFnnalkacqlklSVANSVNFGRIAFQIVYHIWGFLELykkGAI 249
Cdd:COG0498  152 QLAQMLTYGA---HVIAVDGNFDDAQRLVKELAADEGL-----------YAVNSINPARLEGQKTYAFEIAEQL---GRV 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 250 NskEKITlaIPSGNFGNALGAFYAKKM----GLnIAKI-KVV----TNSNDVLREFiETGRYDLTHRSlKQTYSPAMDIL 320
Cdd:COG0498  215 P--DWVV--VPTGNGGNILAGYKAFKElkelGL-IDRLpRLIavqaTGCNPILTAF-ETGRDEYEPER-PETIAPSMDIG 287
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 321 KSSNVERVLFdlfgfertlewmqALEEEKFYAlkpkelallqehfscASCSDEACLKTIQKVYAEHQYLIDPHTATALNA 400
Cdd:COG0498  288 NPSNGERALF-------------ALRESGGTA---------------VAVSDEEILEAIRLLARREGIFVEPATAVAVAG 339
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 344335850 401 --------SLKTNEKTLVSATASYEKFPSTTLLALSDQKKN-DNDKTALE 441
Cdd:COG0498  340 lrklreegEIDPDEPVVVLSTGHGLKFPDAVREALGGEPLAvPPDLEAVK 389
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
82-412 6.53e-13

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 69.26  E-value: 6.53e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   82 PKNPAPIFA--LNERLFVQELYHGPSLAFKDMALQplaSLFSNLAVGKnEKYLMLVSTSGDTGPATLE--SLAGMPnvfV 157
Cdd:pfam00291   9 PLVRLPRLSkeLGVDVYLKLESLNPTGSFKDRGAL---NLLLRLKEGE-GGKTVVEASSGNHGRALAAaaARLGLK---V 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  158 VCLYPKDGTSlvQKLQMVTQSASNLKVFGisGDFDDAQNALKNLLKDDdfNNALKACQLKlSVANSVNFGRIAFQIVYHI 237
Cdd:pfam00291  82 TIVVPEDAPP--GKLLLMRALGAEVVLVG--GDYDEAVAAARELAAEG--PGAYYINQYD-NPLNIEGYGTIGLEILEQL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  238 WGFLElykkgainskekiTLAIPSGNFGNALG-AFYAKKMGLNIAKIKVVTNSNDVLREFIETGRYDLThrSLKQTYSPA 316
Cdd:pfam00291 155 GGDPD-------------AVVVPVGGGGLIAGiARGLKELGPDVRVIGVEPEGAPALARSLAAGRPVPV--PVADTIADG 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  317 MDILKSSnvervlfdlfgFERTLEWMQALEEEkfyalkpkelallqehfsCASCSDEACLKTIQKVYAEHQYLIDPHTAT 396
Cdd:pfam00291 220 LGVGDEP-----------GALALDLLDEYVGE------------------VVTVSDEEALEAMRLLARREGIVVEPSSAA 270
                         330
                  ....*....|....*.
gi 344335850  397 ALnASLKTNEKTLVSA 412
Cdd:pfam00291 271 AL-AALKLALAGELKG 285
 
Name Accession Description Interval E-value
Thr-synth_2 cd01560
Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of ...
3-476 0e+00

Threonine synthase catalyzes the final step of threonine biosynthesis. The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.


Pssm-ID: 107203 [Multi-domain]  Cd Length: 460  Bit Score: 568.79  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   3 FAPTRSlKEKKIDFIEAILNPNAPKGGLYTLEHFETLEWQDC---LNLSYNELVECVFERL-GLEIPKGLLTSALKRYEN 78
Cdd:cd01560    2 YVSTRG-GNPGVSFSEALLSGLAPDGGLYVPEELPKLSAEEIaswSGLSYQELAFEVLSLFiGDEIPEDDLKSLIDRAYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  79 FDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLMLVSTSGDTGPATLESLAGMPNVFVV 158
Cdd:cd01560   81 FFRHPDIAPLVQLGDNLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRNERITILVATSGDTGSAAIEGFRGKPNVDVV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 159 CLYPKDGTSLVQKLQMVTQSASNLKVFGISGDFDDAQNALKNLLKDDDFNnalkaCQLKLSVANSVNFGRIAFQIVYHIW 238
Cdd:cd01560  161 VLYPKGGVSPIQELQMTTLPADNVHVVAVEGDFDDCQSLVKALFADEDFN-----KKLKLSSANSINWARILAQIVYYFY 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 239 GFLELYKKGainSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNSNDVLREFIETGRYDLtHRSLKQTYSPAMD 318
Cdd:cd01560  236 AYLQLLKRG---EGEKVEFSVPTGNFGNILAGYYAKKMGLPIKKLIVATNENDVLRRFFKTGRYDR-RESLKQTLSPAMD 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 319 ILKSSNVERVLFDLFGFER--TLEWMQALEEEKFYALKPKELALLQEHFSCASCSDEACLKTIQKVYAEHQYLIDPHTAT 396
Cdd:cd01560  312 ILKSSNFERLLFLLAGRDRtkVKMLMEEFEATGFLSLPKEELKKLREDFSSGSVSDEETLETIREVYEETGYLIDPHTAV 391
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 397 ALNASLKT----NEKTLVSATASYEKFPSTTLLALSDQKkndndktaletlknsynTPDSQRLDDLFEKGIKHQEVLK-L 471
Cdd:cd01560  392 GVRAAERVrkspGTPGVVLSTAHPAKFPEAVKEALGEEP-----------------VELPEELEGLEDLEKRHEDLLAdK 454

                 ....*
gi 344335850 472 NEIKS 476
Cdd:cd01560  455 ELLKS 459
thrC TIGR00260
threonine synthase; Involved in threonine biosynthesis it catalyses the reaction ...
55-436 1.92e-103

threonine synthase; Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 272986 [Multi-domain]  Cd Length: 327  Bit Score: 312.01  E-value: 1.92e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   55 CVFERLGLEIP-KGLLTSALKRYENFDNPKNPAPIFALNerLFVQELYHGPSLAFKDMALqplASLFSNLAVGKNEkyLM 133
Cdd:TIGR00260   1 VWRYREFLPVTeKDLVDLGEGVTPLFRAPALAANVGIKN--LYVKELGHNPTLSFKDRGM---AVALTKALELGND--TV 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  134 LVSTSGDTGPATLeSLAGMPNVFVVCLYPKDGTSlvqKLQMVTQSASNLKVFGISGDFDDAQNALKNLLKDDDfnnalka 213
Cdd:TIGR00260  74 LCASTGNTGAAAA-AYAGKAGLKVVVLYPAGKIS---LGKLAQALGYNAEVVAIDGNFDDAQRLVKQLFEDKP------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  214 cQLKLSVANSVnFGRIAFQIvYHIWGFLELYKKgaiNSKEKITLAIP-SGNFGNALGAFYAKKMG----LNIaKIKVVTN 288
Cdd:TIGR00260 143 -ALGLNSANSI-PYRLEGQK-TYAFEAVEQLGW---EAPDKVVVPVPnSGNFGAIWKGFKEKKMLgldsLPV-KRGIQAE 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  289 SN-DVLREFIETGRyDLTHRSlKQTYSPAMDILKSSNVERVLFdlfGFERTLEWMQALeeekfyalkpkelallqehfsc 367
Cdd:TIGR00260 216 GAaDIVRAFLEGGQ-WEPIET-PETLSTAMDIGNPANWPRALE---AFRRSNGYAEDL---------------------- 268
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 344335850  368 ascSDEACLKTIQKVYAEHQYLIDPHTATALNASLKTNEKTlvsaTASYEKfpsTTLLALSDQKKNDND 436
Cdd:TIGR00260 269 ---SDEEILEAIKLLAREEGYFVEPHSAVAVAALLKLVEKG----TADPAE---RVVCALTGNGLKDPE 327
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
90-441 6.60e-69

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 225.08  E-value: 6.60e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  90 ALNERLFVQELYHGPSLAFKDMALQPLASLFsnLAVGKnekYLMLVSTSGdTGPATLESLAGMPNVFVVCLYPKDGTSLV 169
Cdd:COG0498   78 ELGKNLYVKEEGHNPTGSFKDRAMQVAVSLA--LERGA---KTIVCASSG-NGSAALAAYAARAGIEVFVFVPEGKVSPG 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 170 QKLQMVTQSAsnlKVFGISGDFDDAQNALKNLLKDDDFnnalkacqlklSVANSVNFGRIAFQIVYHIWGFLELykkGAI 249
Cdd:COG0498  152 QLAQMLTYGA---HVIAVDGNFDDAQRLVKELAADEGL-----------YAVNSINPARLEGQKTYAFEIAEQL---GRV 214
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 250 NskEKITlaIPSGNFGNALGAFYAKKM----GLnIAKI-KVV----TNSNDVLREFiETGRYDLTHRSlKQTYSPAMDIL 320
Cdd:COG0498  215 P--DWVV--VPTGNGGNILAGYKAFKElkelGL-IDRLpRLIavqaTGCNPILTAF-ETGRDEYEPER-PETIAPSMDIG 287
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 321 KSSNVERVLFdlfgfertlewmqALEEEKFYAlkpkelallqehfscASCSDEACLKTIQKVYAEHQYLIDPHTATALNA 400
Cdd:COG0498  288 NPSNGERALF-------------ALRESGGTA---------------VAVSDEEILEAIRLLARREGIFVEPATAVAVAG 339
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 344335850 401 --------SLKTNEKTLVSATASYEKFPSTTLLALSDQKKN-DNDKTALE 441
Cdd:COG0498  340 lrklreegEIDPDEPVVVLSTGHGLKFPDAVREALGGEPLAvPPDLEAVK 389
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
91-403 3.39e-28

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 112.22  E-value: 3.39e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  91 LNERLFVQELYHGPSLAFKDMALQPLASLFSnlAVGKNEKYLMLVSTSGDTGPATLESLAGMpNVFVVCLYPKdGTSLVQ 170
Cdd:cd00640   13 GGANIYLKLEFLNPTGSFKDRGALNLILLAE--EEGKLPKGVIIESTGGNTGIALAAAAARL-GLKCTIVMPE-GASPEK 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 171 KLQMVTQSAsnlKVFGISGDFDDAQNALKNLLKDDDfnnalkacqlKLSVANS-VNFGRIAFQIVYHiwgfLELYKkgAI 249
Cdd:cd00640   89 VAQMRALGA---EVVLVPGDFDDAIALAKELAEEDP----------GAYYVNQfDNPANIAGQGTIG----LEILE--QL 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 250 NSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNsndvlrEFIetgrydlthrslkqtyspamdilkssnvervl 329
Cdd:cd00640  150 GGQKPDAVVVPVGGGGNIAGIARALKELLPNVKVIGVEP------EVV-------------------------------- 191
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344335850 330 fdlfgfertlewmqaleeekfyalkpkelallqehfscaSCSDEACLKTIQKVYAEHQYLIDPHTATALNASLK 403
Cdd:cd00640  192 ---------------------------------------TVSDEEALEAIRLLAREEGILVEPSSAAALAAALK 226
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
82-412 6.53e-13

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 69.26  E-value: 6.53e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850   82 PKNPAPIFA--LNERLFVQELYHGPSLAFKDMALQplaSLFSNLAVGKnEKYLMLVSTSGDTGPATLE--SLAGMPnvfV 157
Cdd:pfam00291   9 PLVRLPRLSkeLGVDVYLKLESLNPTGSFKDRGAL---NLLLRLKEGE-GGKTVVEASSGNHGRALAAaaARLGLK---V 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  158 VCLYPKDGTSlvQKLQMVTQSASNLKVFGisGDFDDAQNALKNLLKDDdfNNALKACQLKlSVANSVNFGRIAFQIVYHI 237
Cdd:pfam00291  82 TIVVPEDAPP--GKLLLMRALGAEVVLVG--GDYDEAVAAARELAAEG--PGAYYINQYD-NPLNIEGYGTIGLEILEQL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  238 WGFLElykkgainskekiTLAIPSGNFGNALG-AFYAKKMGLNIAKIKVVTNSNDVLREFIETGRYDLThrSLKQTYSPA 316
Cdd:pfam00291 155 GGDPD-------------AVVVPVGGGGLIAGiARGLKELGPDVRVIGVEPEGAPALARSLAAGRPVPV--PVADTIADG 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  317 MDILKSSnvervlfdlfgFERTLEWMQALEEEkfyalkpkelallqehfsCASCSDEACLKTIQKVYAEHQYLIDPHTAT 396
Cdd:pfam00291 220 LGVGDEP-----------GALALDLLDEYVGE------------------VVTVSDEEALEAMRLLARREGIVVEPSSAA 270
                         330
                  ....*....|....*.
gi 344335850  397 ALnASLKTNEKTLVSA 412
Cdd:pfam00291 271 AL-AALKLALAGELKG 285
Thr-synth_1 cd01563
Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last ...
73-262 2.50e-04

Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.


Pssm-ID: 107206 [Multi-domain]  Cd Length: 324  Bit Score: 42.97  E-value: 2.50e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850  73 LKRYENFdNPKNPAPIFALNE-------------RLFVQELY-----HGPSLAFKD--MALqplasLFSN-LAVGKNEky 131
Cdd:cd01563    1 LWRYREL-LPVTEDDIVSLGEgntplvraprlgeRLGGKNLYvkdegLNPTGSFKDrgMTV-----AVSKaKELGVKA-- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 132 LMLVSTsGDTGP--ATLESLAGMPnVFVVClyPKdGTSLVQKLQMVTQSAsnlKVFGISGDFDDAQNALKNLLKDDDFnn 209
Cdd:cd01563   73 VACAST-GNTSAslAAYAARAGIK-CVVFL--PA-GKALGKLAQALAYGA---TVLAVEGNFDDALRLVRELAEENWI-- 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 344335850 210 alkacqlklSVANSVNFGR------IAFQIV---------------------YHIW-GFLELYKKGAINSKEKITLAIPS 261
Cdd:cd01563  143 ---------YLSNSLNPYRlegqktIAFEIAeqlgwevpdyvvvpvgnggniTAIWkGFKELKELGLIDRLPRMVGVQAE 213

                 .
gi 344335850 262 G 262
Cdd:cd01563  214 G 214
Thr_synth_N pfam14821
Threonine synthase N terminus; This domain is found at the N-terminus of many threonine ...
6-65 1.46e-03

Threonine synthase N terminus; This domain is found at the N-terminus of many threonine synthase enzymes.


Pssm-ID: 464335 [Multi-domain]  Cd Length: 79  Bit Score: 37.40  E-value: 1.46e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 344335850    6 TRSlKEKKIDFIEAILNPNAPKGGLY---TLEHFETLEWQDCLNLSYNELVECVFER-LGLEIP 65
Cdd:pfam14821   5 TRG-GAPPLSFEDALLKGLAPDGGLYvpeEIPQLSAEELASWRGLSYQELAFEVLSLfIGDDIP 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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