Conserved Protein Domain Family
HTH_40

?
pfam14493: HTH_40 
Helix-turn-helix domain
This presumed domain is found at the C-terminus of a large number of helicase proteins.
Statistics
?
PSSM-Id: 464189
Aligned: 239 rows
Threshold Bit Score: 53.2805
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CBJ28290        43 AHEAYMR--QDSLTLEQVAARmpRPVAIGTFAGHLAACLEAGltfawdR----RRLGIDlDLERKILDILDgfkqeghdp 116
WP_012657039   215 NTARTYQl-INSYSVNETARL--LRLREHTIQDHIIEMMIKD------YpvefSRFINA-DELQTIVNLYSqlt------ 278 Macrococcus c...
Q2FYE9         219 QTYITYTklLEQFTMEDIAAQ--QQVKINTIEDHVLEILIKG------YmsnyDDYVEL-EDQLQFLNFYQqhr------ 283 Staphylococcu...
Q5HP63         221 NTYLSYQklKSGLNLKEIAQL--QNVKLNTIEDHILEMYIKG------YlidyTLFINK-KDILEFINYYQkhr------ 285 Staphylococcu...
WP_012958450   256 SADQTARliQQGHTLDQIATK--RKLKRSTIEDHIIEIALQQ------PdfsiKPYVTE-EIKHKIYAFMKekgs----- 321 Alkalihalobac...
jgi:EAT1b_2974 244 SARESYElfLKGYTFQQVQAK--RRLRTSTIEDHVVEMAMYL------EvfplEQFVPM-EDVVTI-EELRhpd------ 307
WP_014098130   256 SAAVTFGflKQGKTIAEISTL--RGLKQSTIEDHLIEIALTV------PdfplNRYVPK-DEEQKIIRAAAdln------ 320 Weizmannia co...
WP_014643556   252 SAKHTYHylELGWTLEAIVSK--RRLKKSTIQDHIVEAALVI------PdfsiERFLSA-KDQQRIIAAANnmn------ 316 Halobacillus ...
WP_014019231   614 SVQETFVlyQQGKTIFQIAQF--RSLAKTTIEGHIVQLIEE-------DkikkATFLDE-KSCEDIRGAAKkld------ 677 Cyclobacteriu...
WP_014771011   620 SELMTMKlfNEGKNIYQIAEA--RGMTFNTVEDHLVNMVKK-------KeldaEKFLSK-DDLLNIRLAYRrqg------ 683 Belliella bal...
CBJ28290       117 lasgfrLKPIFERLppgtESKTAYSMIRLVL 147
WP_012657039   279 ---ygkLKSFYEHS----EV-KDYFKLKIGI 301 Macrococcus caseolyticus
Q2FYE9         284 ---gerLKFYKEQF----DT-LSYFQLKVLI 306 Staphylococcus aureus subsp. aureus NCTC 8325
Q5HP63         286 ---gerLKFYKEHF----TD-WTYFQIKLVI 308 Staphylococcus epidermidis RP62A
WP_012958450   322 ---svkLRDIKEAL----GDEVSYFMIRLVL 345 Alkalihalobacillus pseudofirmus
jgi:EAT1b_2974 308 ---swaLKPVFEKM----GR-VSYFQIRLVF 330
WP_014098130   321 ---tkkLKPIKEKV----GD-IPYFHIRLVL 343 Weizmannia coagulans
WP_014643556   317 ---tlrLKQIHQTL----NGEFDYFQIRLAL 340 Halobacillus halophilus
WP_014019231   678 ---gqgLKKLKDHF----GEKYSYFELKVAL 701 Cyclobacterium marinum
WP_014771011   684 ---thfLKPLKEHF----GERYSYFQLKVAL 707 Belliella baltica
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap