Conserved Protein Domain Family
RE_Alw26IDE

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pfam09665: RE_Alw26IDE 
Type II restriction endonuclease (RE_Alw26IDE)
Members of this entry are type II restriction endonucleases of the Alw26I/Eco31I/Esp3I family. characterized specificities of the three members are GGTCTC, CGTCTC and the shared subsequence GTCTC.
Statistics
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PSSM-Id: 430741
Aligned: 3 rows
Threshold Bit Score: 704.492
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q1ATV9                   16 EYQKFIVEHPNYAGMPDVRGVSGDIQWEAPSNRKSGRFRDTYRKRDAWWAEKAREVGIDPS---SNQWISRTAKKIHPTG 92  Rubr...
WP_058027864             27 EYMVFMATNEIYANMPDAIKSDGKIQWEAPSNRSGGLYQYTHQHRLEWWQEKAKSEGIDVN---QNQWISKTAKLIHPTS 103 Colw...
PRJNA290651:AEM51_00570  92 KYQEFIATHNNYKGMPLKRRSDGTIQWVSTIQTNDG------KERVEFWENKRKELKIKANhvlDAGFRQKVAFANHPTK 165
Q1ATV9                   93 EKPCKVCGRVLDIAYAYPNRHLIGRLQRLpyvdesFP----IDPLEHISSLVT-------RMVEQFGDSVFEELPALLGT 161 Rubr...
WP_058027864            104 EKPCKRCGKFMFIKYMYPSHILLKRINKL------FPdeikVKIFDTILNVVS-------DLYETNGDTVLRNLPSLLKA 170 Colw...
PRJNA290651:AEM51_00570 166 IHICLFSGSELYIDYRYPSPSRIDLLNKVydq-dlKYydldVYEIANLLYDVDgcrlfcdVFKLSKEFSNVEQLIEILKV 244
Q1ATV9                  162 KWISVPELEPRLEVWLKWIAEEYIPHEPSVLSPGVMSNAPDRLDGFHSFNICCRGIRDKGRSKENLQSYTTDRRVFEYWV 241 Rubr...
WP_058027864            171 KNISIPELGDNLDDWLAWIEESYIPAEPSTLSPGAMSNAPDRFEGFHSFNKCCRGQADKGRSDKNLRSYTTDRRVFEYWA 250 Colw...
PRJNA290651:AEM51_00570 245 --------------------DYVIAEYSPFVSPGVMSNSPDRFDGYHSYNNDVRAITDTGRYKDNLKRYTQDRRVYEMWS 304
Q1ATV9                  242 DGDWVAADRLMGIIRSDdeLKREPCLNGHPGPCSADHIGPISLGFAHRPEFQFLCKACNSGKNNRMYASDVEHLRRKSDE 321 Rubr...
WP_058027864            251 DGDWIAADRLMGQVSSN--MRDEPCADGGEGPPSPDHIGPISLGFCHRPEFHLLSKAANSAKNNRMSKWDILHLKEAEKK 328 Colw...
PRJNA290651:AEM51_00570 305 GGNWKMADRLYATF--------------VKNGVSPDHIGPMSLGFAHRPKFQPMTSNENSAKGNRMTLSDIQILIADESN 370
Q1ATV9                  322 GETVASWYSQKLWELRRDSVVDEETARRLSKLLRDNRHTAMHVLDRFRRSGHHTFLATFLGLHHANHDISFEGLRVEDHR 401 Rubr...
WP_058027864            329 GITICSWYAEPIWNILKDKVKNDEHARRLSKIMRDNQRNAMYLLSQMKTRGEYAFLSYLLELERANFNVEFNSLKAVNYL 408 Colw...
PRJNA290651:AEM51_00570 371 GDEVITWHSKYVWDKLKLKVKNDTDALKLSGLMRKNLHHVLIIFSIINENGHRAFLQQFLNPDFSYFDYEFEKF--NPKT 448
Q1ATV9                  402 TRFDNIRKSTRTTEYATEQKARRIRVAFSALRDYVDKESRNALNVCTPAIDEKIAEALSLLDGEPLDIRKLDDKIRSIVE 481 Rubr...
WP_058027864            409 TVYNELQHSERVVKYSEEQKSRRLRIGFEALDSYSSKENRHTFLVASEQIEFKLVECIDYLNALGKEHVLLNESVKTAID 488 Colw...
PRJNA290651:AEM51_00570 449 GSFHNVVSKKLEGQNQKNNAERYVRIAFESLDKYRDIENRNTKIWESELITKKVNQVLGLLDE----------------- 511
Q1ATV9                  482 QEVpsEEELRSVVTRIPTPEeepDTFRDARARLREAMDLVAAEFS 526 Rubrobacter xylanophilus DSM 9941
WP_058027864            489 TGF--DIQLREVVNKVPNLPf--KPYEHVKALLVEGMNAVATDLA 529 Colwellia sp. MT41
PRJNA290651:AEM51_00570 512 -----------------------KKDDEALLLLHQIFQELSSIAE 533
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