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pfam08240: ADH_N (This model is obsolete and will soon be replaced with a more recent model)
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Alcohol dehydrogenase GroES-like domain
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure.
Statistics
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PSSM-Id: 219758
View PSSM: pfam08240
Aligned: 93 rows
Threshold Bit Score: 54.1758
Threshold Setting Gi: 75171246
Created: 22-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

pfam08240 is a member of the superfamily cl17172.
Sequence Alignment?
Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1VJ0_A       42 RGSILVEILSAGVCGSDV--HMFRG-EDPRVPLPIILGHEGAGRVVEVNGEKRDlngelLKPGDLIVWNRGIT-CGECYW 117
gi 81853122  27 NNEVLVKVYATSVNPADC--GMRRGfFGPRVQLPAILGFDVSGVVEAVGENVRD-----FQVGDEVYY------------ 87
gi 81715664  27 PNEILVRTKAIGLNFADI--YRRRGdYHLAGNPPYILGYEGAGIVEEIGTNVTT-----IKPGDRIAF-------AD--- 89
gi 75171246  28 EGEIRVKNKAIGLNFIDV--YFRKG-VYKPASMPFTPGMEAVGEVVAVGSGLTG-----RMIGDLVAY------AGN--- 90
gi 81473112  28 ENEIQVENKAIGINFIDT--YIRSG-LYPPPSLPSGLGTEAAGIVSKVGSGVKH-----IKAGDRVVY------AQS--- 90
gi 81846324  27 QGEVLVRFRAASLNYRDY--LMAIGrYNPKQKLPLIPLSDGAGEVVQVGPGVTR-----WKIGDKVCA-------NFAQT 92
gi 81839945  27 KNEILLDVHAAGVNFPDT--LIIEGkYQFKPPFPFSPGGEAAGVIAAVGENVSH-----LKPGDRVMA-------LT--- 89
gi 81323893  35 PDEVLVRIRAAGLCHTDH--------DSLRWGKSIVMGHEGAGVVEQVGNQVDA-----LAPGDKVILNWATP-CMQCYQ 100
gi 81856229  27 AGEILVRVVATGVCHTDM--VMRD--QHLPTPQPVVLGHEGAGVVEQVGPGVAK-----VAVGDHVVM--TFNsCGRCPS 95
gi 75330107  38 AHEVRIKILCTSICHTDItfWRMEG------NHPSIFGHEAVGVVESVGEHVQE-----VAVGDMVVPVFAAQ-CSECPD 105
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
1VJ0_A      118 CKVSKEpYLC-------------------------PNRKVYGINrgcs--eyphLRGCYSSHiVLDPETDVLKV 164
gi 81853122  88 -----------------------------------AIPHELG-------------GGANAEY-HAFPSSMIAKK 112
gi 81715664  90 ------------------------------------------------------VPFANAEL-VAVPSKKTIQL 108
gi 75171246  91 ------------------------------------------------------PMGAYAEE-QILPADKVVPV 109
gi 81473112  91 ------------------------------------------------------ALGAYSSV-HNINADKAAIL 109
gi 81846324  93 WFDGAP-EKD-------------------------MLKNTLGGP----------LDGTLCEY-RIFREEGLVLM 129
gi 81839945  90 ------------------------------------------------------GWGSFAEQ-VAVPHYNVLPI 108
gi 81323893 101 CQEGNQ-HICenhspvaa----------ganghtpGHAHLEGTQwqgkpiersfNIGTLSEY-TLVKASACVKM 162
gi 81856229  96 CSDHAP-TYCheffprnfmgaredgssglskgsevIHANIFGQS-------------SFATY-ALCHERNAVKV 154
gi 75330107 106 CLSDRS-NLCsklpnvaglmprdrttrfssvstgePIRHFLSVS-------------SFAEY-TVVDITHIVKL 164
Citing CDD
Marchler-Bauer A et al. (2013), "CDD: conserved domains and protein three-dimensional structure.", Nucleic Acids Res. 41(D1):D384-52.
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