2IPC,6T4H,4YS0


Conserved Protein Domain Family
SecA_SW

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pfam07516: SecA_SW 
SecA Wing and Scaffold domain
SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner. This family is composed of two C-terminal alpha helical subdomains: the wing and scaffold subdomains.
Statistics
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PSSM-Id: 462189
Aligned: 736 rows
Threshold Bit Score: 106.038
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IPC_D        724 PIEHPMVTRSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLIL-LGkdeeVKEAAIGMVEE----TVASLA- 797  Thermus therm...
BAJ99961      767 AIESNAVVKQLLGLQINAEKYYFGIRKNLVEFDEVLEVQRKHIYSLRQVIL-SGdsesCSEQIFQYMQA----VVDEIIl 841 
XP_019072059  770 PIEGDAIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRKHVYDLRQLIL-TGdiesCSQHVFQYMQA----VVDEIVf 844 
KRH53291      782 PIEGDAIVKQLLALQINAEKFFFGIRKNLVEFDEVLEVQRKHVYDLRQLIL-TGddesCSQHIFQYMQA----VVDEIVf 856 
D8WUA4        770 PIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRKHVYDLRQLLL-TGenesCSQHIFQYMQA----VVDEIVv 844  thale cress
RQL86036      617 PIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRKHVYDLRQLLL-TGdnesCSQHIYQYMQA----VVDEIVv 691 
ERN08757      792 PIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQRKHIYDLRQSIL-MGdsekCCERIYQYMQA----VVDEIVl 866 
CBN74990      705 PIENKQVSATLDKVQIATEDYFAGIRRTVFSFDEVMNDQRLALYRARDDVIdKE-----REELRELALEysakTCTEIVq 779 
XP_002289797  697 PVEAPQVTDALDKVQLAVEEKYRDIRGQIFDFDNVLNDQRRIFYKRRQEMLaSN-----SEDTLKIMDSynkqTVADIVk 771 
XP_002177119  704 PVEAQQVTDALDKVQKQVEEKYRDIRREIFNFDDVLNSQRKVIYSRRRGVLfSA-----PEDSLKMMKTynekTIQDIVk 778 
2IPC_D        798 --ENFLN--PEVH-P-------E--DW-DL-EGLKATLLD-TApqlqdf-----------------------pfaelRAL 837  Thermus therm...
BAJ99961      842 -gNVDPQkpPK--------------TW-DL-AKLLDEFSSlGGnlltetfketqeedlqssleqilrygsvevdnfvLPN 904 
XP_019072059  845 -gNVNALkhPS--------------KW-NL-GKLLKEFIGiSGrllddsfvgiseetllkalaqlhelssvdinnfyLPN 907 
KRH53291      857 -sNIDPLkhPR--------------SW-GL-SKLLKEFVTvGGkllreslggisddtllnslglvndlssvdivnfsLPN 919 
D8WUA4        845 -gNSNPQkhPR--------------YW-SL-AKLLKEFMAiSGnlldesfsgiteetmlqslenlhegssiemedlsLPH 907  thale cress
RQL86036      692 -gNSDPHkhPR--------------NW-NL-AKLLKDFMAiSGnlldegtmlqalen-------lhetssidmdnfhLPH 747 
ERN08757      867 -gSVNPLkpPR--------------DW-NL-GKIIEEFVGiARkilaasfagvsketllssleqidqmnitdidlfcLPK 929 
CBN74990      780 gnSASDGtpKAVLsDklrqffpLgdASaLSaESLTAAYSK---------------------------------------- 819 
XP_002289797  772 aqTNDDGsvKV--------------------DKVMEKIGQfFPsvlpvvtve---------------------------- 803 
XP_002177119  779 aqTDEAGsvKV--------------------DKVLEKIAQfFPlaqplvtvg---------------------------- 810 
2IPC_D        838 Ka-----------------------------------------eEAVERLVEA----ALK----AYE------A------ 856  Thermus therm...
BAJ99961      905 LpappnsfrgirkrtssamrwfamcvddtskkgrytnivnllrkYFGDFLIATylevLQEs---RYH------------- 968 
XP_019072059  908 LptppnafrgirrktsslkrwlaicsddsardgryratanllrkYLGDFLIASyldaVQEs---GYD------------- 971 
KRH53291      920 LpappnafrgirrkssslrrwlaictddligngkyqttsnllrkYLGDFLIASylnvVEEs---GYD------------- 983 
D8WUA4        908 LpkppnafrgirrknsslrrwldicsdnltgsgsyrtlinllrkFLGDYLIASylnvVQEs---GFD------------- 971  thale cress
RQL86036      748 LpkppnafrgirrknaslrrwldicsddltgsgryrtsinllrkFLGDYLIASylsaVQEs---GFD------------- 811 
ERN08757      930 MpvppnsfrginkkassfrrwlticsdeltmngryggivnilrkYLGDFLIASyldvVQDs---GYD------------- 993 
CBN74990      820 --------------------------------------------GGKDGLLQHaldqAAAatekKLS------Dieavra 849 
XP_002289797  804 ------------------------------------disglkqdEVVSFLNVA----VEEifnaKVEeqeskaKadgrap 843 
XP_002177119  811 ------------------------------------dlsgknqnAVADLLNVA----VEEvfsaKIKemdalaKsagnap 850 
2IPC_D        857 ----REAelspplMRAVERFVILNVVDNAWKEHLHNLDVLRQGIFLRGYGQKDPFQEYKIEATRLFNEMVAFIKSEVAKF 932  Thermus therm...
BAJ99961      969 ----DAY------IRGIEREALLKTLDMLWKDHLVNMNKLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEA 1038
XP_019072059  972 ----DAY------VKEIERAVLVKTLDCFWRDHLINMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVES 1041
KRH53291      984 ----ERH------AKEIERAVLLQTLDCFWRDHLVNMNRLSSAVNIRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEA 1053
D8WUA4        972 ----DGY------IKEIERAVLLKTLDCYWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTVES 1041 thale cress
RQL86036      812 ----DGY------VKEIERAVLLKTLDCFWRDHLVNMNKLSSAVNVRSFAHRNPLEEYKIDGCRFFISMLSATRRLTIES 881 
ERN08757      994 ----YAY------IQEVERAIFVKTLDCFWRDHLINMNQLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVQA 1063
CBN74990      850 glssESA-----------RFLTLTQMDDLWCQHLENMNLLKESVSMEVFRGRNPLEEFGAQGKEMFLDLLDNVRRNTVYS 918 
XP_002289797  844 gslaRSA-----------NYITLVSMDNAWSDHLQNMENLKENVFLRKYQNLDPADEYKIESLALFEGLLDKMRLNTIFS 912 
XP_002177119  851 nslgRSA-----------NYIALVTMDNAWSDHLQAMENLKESVILRQYQGRDPVAEYQNEAFKLFQGLEDTMRFNAVYS 919 
2IPC_D        933 LFRLK 937  Thermus thermophilus HB8
BAJ99961     1039 LLRYW 1043
XP_019072059 1042 LLRYW 1046
KRH53291     1054 LLRYW 1058
D8WUA4       1042 ILQYW 1046 thale cress
RQL86036      882 ILQYW 886 
ERN08757     1064 LTRYW 1068
CBN74990      919 LQMyn 923 
XP_002289797  913 LWqsl 917 
XP_002177119  920 LWqsl 924 
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