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Entrez CDD Structure Protein Help
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pfam00107: ADH_zinc_N (This model is obsolete and will soon be replaced with a more recent model)
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Zinc-binding dehydrogenase
Statistics
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PSSM-Id: 215721
View PSSM: pfam00107
Aligned: 108 rows
Threshold Bit Score: 48.0776
Threshold Setting Gi: 81815019
Created: 21-Dec-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
pfam00107 is a member of the superfamily cl16912.
Sequence Alignment?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3KRT_A       240 GLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAegyrfwkdentqdpkewkrFGKRIRELTGG-EDIDI 317
gi 81816508  179 GVGVAGIQLAKAFN-AFVITTAGNEEKAKKCKELGADLVFNHYKd-----------------dVVKKVREVFKE--GVDV 238
gi 75535497  182 GLGHVAIQLLRHLSaATVIALDVSADKLELATKVGAHEVVLSDKd------------------AAENVRKITGS-QGAAL 242
gi 1730779   186 AVGQMLIQLAKKLNgFSKIIVVASRKHEKLLKEYGADELFDYHDa-----------------dVIEQIKKKYNN---IPY 245
gi 6225007   177 GLGHMAVQYAKAMG-MHVAAADIFPDKLALAEKLGADLVVDARAp-----------------dAVEEVQRRTGG---LHG 235
gi 59802638  172 GLGNLALQYAKNVFnAKVIAIDVNDEQLAFAKELGADMVINPKNe-----------------dAAKIIQEKVGG---AHA 231
gi 6225005   185 GLGSFGIQYAKAMG-MRVVAVDHIS-KEDHCRNLGAEWFVDAFDtp----------------dIVAHIRKLTNG--GAHG 244
gi 146345360 191 GLGHLAVQIAAKGMgLRVIGVDHGS-KEELVKASGAEHFVDITKfptgd----------kfeaISSHVKSLTTKgLGAHA 259
gi 3912971   182 GLGSLAIQYAKAMG-FRVIAIDGGEEKGEFVKSLGAEAYVDFTVsk----------------dIVKDIQTATDG--GPHA 242
gi 81309072  184 TLLMGNVIYKMAMR-ERVGAISRAWGYAEQVLSRGGEVVWSFTKei----------------dMPMAVTVCTNA--FALG 244
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
3KRT_A       318 VFEHPG-RETFGASVFVTRKGGTITTCASTS---GYMHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAK 385
gi 81816508  239 VVDHIG-EATFWKSVQMLRKGGKLVFFGTTT---GSKGEIDIRYVFVREIQLLGVYMGS-----RANLFKITELFER 306
gi 75535497  243 VLDFVGyQPTIDTAMAVAGVGSDVTIVGIGD---GQAHAKVGFFQSPYEASVTVPYWGA-----RNELIELIDLAHA 311
gi 1730779   246 LVDCVSnTETIQQVYKCAADDLDATVVQLTVlteKDIKEEDRRQNVSIEGTLLYLIGGNdvpfgTFTLPADPEYKEA 322
gi 6225007   236 ALVTAVsPKAMEQAYSMLRSKGTMALVGLPP----GQICLPVFDTVLKRITVRGSIVGT-----RQDLEEALEFAGE 303
gi 59802638  232 TVVTAVaKSAFNSAVEAIRAGGRVVAVGLPP----EKMDLSIPRLVLDGIEVLGSLVGT-----REDLKEAFQFAAE 299
gi 6225005   245 VVSFAAaKKPMEYALEYVRKRGTVVFVGLPK---DGTIPLDTLSLICNEITVKGSIVGS-----RMDVDEAIDFITR 313
gi 146345360 260 VIVCTAsNIAYAQSLLFLRYNGTMVCVGIPEnepQAIASAYPGLFIQKHVHVTGSAVGN-----RNEAIETMEFAAR 331
gi 3912971   243 AINVSVsEKAIAQSCQYVRSTGTVVLVGLPA---GAKVVAPVFDAVVKSISIRGSYVGN-----RADSAEAIDFFTR 311
gi 81309072  245 TIFFPKsPVFIEQAMAFGWAQSTMVNVIHPG---LAKQKEDIKWQTPKWNSICVSLVGN-----RLDRHEALHYHTR 313
Citing CDD
Marchler-Bauer A et al. (2013), "CDD: conserved domains and protein three-dimensional structure.", Nucleic Acids Res. 41(D1):D384-52.
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