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pfam00020: TNFR_c6 
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TNFR/NGFR cysteine-rich region
Statistics
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PSSM-Id: 249514
View PSSM: pfam00020
Aligned: 37 rows
Threshold Bit Score: 27.3321
Threshold Setting Gi: 283807022
Created: 28-Mar-2013
Updated: 4-Apr-2013
Structure
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Program:
Drawing:
Aligned Rows:
pfam00020 is a member of the superfamily cl12111.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
3IJ2_Y        84 CAYG-YYQDe-ET--GHCEACSVCEV-GSGLVFSCQDKQNTVC 121
3IJ2_Y        42 CLDSvTFSDvvSAt-EPCKPCTECLG-LQSMSAPCVEADDAVC 82
gi 128155    141 CPEG-TFSDe-ANfvDPCLPCTICEE-NEVMVKECTATSDAEC 180
3IJ2_Y       124 CPEG-TYSDe-ANhvDPCLPCTVCED-TERQLRECTPWADAEC 163
gi 269849546  65 CIPGvSFSPd-HHtrPHCESCRHCNS-GL-LVRNCTITANAEC 104
gi 112795     47 CPPS-TFSSi-GGq-PNCNICRVCAG-YFRFKKFCSSTHNAEC 85
gi 115978     69 CEPD-YYLD--EA--DRCTACVTCSRdDLVEKTPCAWNSSRVC 106
gi 342187056 125 CKPD-FYCDs-PGc-EHCVRCASCEH-GT--LEPCTATSNTNC 161
gi 139627     28 CGGH-DYEK--DG--L-C--CASCHP-GFYASRLCGPGSNTVC 61
gi 465067     32 CKDT-EYKR--HN--L-C--CLSCPP-GTYASRLCDSKTNTQC 65
Citing CDD
Marchler-Bauer A et al. (2013), "CDD: conserved domains and protein three-dimensional structure.", Nucleic Acids Res. 41(D1):D384-52.
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