5UZ7


Conserved Protein Domain Family
7tmB1_calcitonin_R

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cd15274: 7tmB1_calcitonin_R 
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calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors
This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.
Statistics
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PSSM-Id: 341343
Aligned: 10 rows
Threshold Bit Score: 395.299
Created: 11-Nov-2013
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:putative polypeptide ligand binding pocket [polypeptide binding site]
Evidence:
  • Comment:based on mutagenesis of human glucagon receptor (GCGR), and modeling studies of GCGR and other related class B GPCRs
  • Comment:Residues in the globular N-terminal extracellular domain and the extracellular loops of the 7TM domain may also be involved in ligand binding.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            #   #                                                         #  ##  #   
5UZ7_R    153 AYVLYYLAIVGHSLSIFTLVISLGIFVFFRS----------------LGCQRVTLHKNMFLTYILNSMIIIIHLVEVvpn 216 human
Q7ZXS8    153 ALNLYYLTIIGHGLSIASLLISLGIFFYFKN----------------LSCQRITLHKNLFFSFVCNSIITIISLSAVann 216 African clawed frog
P32214    145 AYVLYYLALVGHSMSIAALIASMGIFLFFKN----------------LSCQRVTLHKNMFLTYILNSIIIIIHLVEVvpn 208 Norway rat
P25117    146 AYILYYLAIVGHSLSILTLLISLGIFMFLRYfnllapfnallyptrsISCQRVTLHKNMFLTYVLNSIIIIVHLVVIvpn 225 pig
NP_001733 145 AYVLYYLAIVGHSLSIFTLVISLGIFVFFRS----------------LGCQRVTLHKNMFLTYILNSMIIIIHLVEVvpn 208 human
Q68EK2    146 AMNLFYLALIGHGLSLTSLFISLGIFFHFKS----------------LSCQRITLHKNLFFSFVLNSIITIIWLTAVann 209 zebrafish
Q16602    138 ALNLFYLTIIGHGLSIASLLISLGIFFYFKS----------------LSCQRITLHKNLFFSFVCNSVVTIIHLTAVann 201 human
ACR48173  142 ALNLYYLAIIGHGLSITSLLISLGIFFYFKS----------------LSCQRITLHKNLFFSFVCNSVVTIISLTAIann 205 chicken
BAI63096  106 VWAKYRLAISGYSVSMITLLVALFIFFHFRS----------------LQCQRVTMHKHLFVSYILNALASVLWLHSHtip 169 Ciona intestinalis
P30988    163 AYVLYYLAIVGHSLSIFTLVISLGIFVFFRKlttifplnwkyrkalsLGCQRVTLHKNMFLTYILNSMIIIIHLVEVvpn 242 human
Feature 1                                                     #      #                        
5UZ7_R    217 gelv-------------------------------------rrdpvsCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVa 259 human
Q7ZXS8    217 qalv-------------------------------------atnpviCKISQFIHLYLMGCNYFWMLCEGIYLHTLIVVa 259 African clawed frog
P32214    209 gdlvrrdpmhifhhntymwtmqwelspplplsahegkmdphdsevisCKILHFFHQYMMACNYFWMLCEGIYLHTLIVMa 288 Norway rat
P25117    226 gelv-------------------------------------krdppiCKVLHFFHQYMMSCNYFWMLCEGVYLHTLIVVs 268 pig
NP_001733 209 gelv-------------------------------------rrdpvsCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVa 251 human
Q68EK2    210 qelv-------------------------------------qqnpisCKISQFIHLYIFGCNYFWMLCEGIYLHTLIVVa 252 zebrafish
Q16602    202 qalv-------------------------------------atnpvsCKVSQFIHLYLMGCNYFWMLCEGIYLHTLIVVa 244 human
ACR48173  206 qklv-------------------------------------aanpisCKVAMFIYQYLMGCNYFWMLCEGIHLHTLIVVa 248 chicken
BAI63096  170 gv-----------------------------------------sqvyCKFLHAIHQYTETSNYFWMLCEGIYLHTLVVVs 208 Ciona intestinalis
P30988    243 gelv-------------------------------------rrdpvsCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVa 285 human
Feature 1                                                  ## # #                             
5UZ7_R    260 VFTEKQRLRWYYLLGWGFPLVPTTIHAITRavYFNDNCWLSvETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETH 339 human
Q7ZXS8    260 VFAEKQHLMWYYLLGWGFPLIPACIHAVARslYYNDNCWISsETHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTH 339 African clawed frog
P32214    289 VFTEDQRLRWYYLLGWGFPIVPTIIHAITRavYYNDNCWLStETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRQTH 368 Norway rat
P25117    269 VFAEGQRLWWYHVLGWGFPLIPTTAHAITRavLFNDNCWLSvDTNLLYIIHGPVMAALVVNFFFLLNILRVLVKKLKESQ 348 pig
NP_001733 252 VFTEKQRLRWYYLLGWGFPLVPTTIHAITRavYFNDNCWLSvETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETH 331 human
Q68EK2    253 VFAEKQHLMWYYLLGWGFPLIPATIHAVARsyYYNDNCWISsNTSLLYIIHGPICAAMLVNLFFLLNIVRVLITKLKVTH 332 zebrafish
Q16602    245 VFAEKQHLMWYYFLGWGFPLIPACIHAIARslYYNDNCWISsDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKVTH 324 human
ACR48173  249 VFADKQHLMWYYLLGWGFPLIPASIHAVARslYYNDNCWISsDTHLLYIIHGPICAALLVNLFFLLNIVRVLITKLKDTH 328 chicken
BAI63096  209 VFREKQNLLIYTGLGWGFPALSLLLYVVTRfvLDDSSCWATpTTDAAYIIHGPIAIALVINFIILMNLLRVLLSKLRANR 288 Ciona intestinalis
P30988    286 VFTEKQRLRWYYLLGWGFPLVPTTIHAITRavYFNDNCWLSvETHLLYIIHGPVMAALVVNFFFLLNIVRVLVTKMRETH 365 human
Feature 1                             #  #               #   #                                
5UZ7_R    340 eaeshMYLKAVKATMILVPLLGIQFVVFPWRPSNkm--lGKIYDYVMHSLIHFQGFFVATIYCFCNnEVQTTVKRQWAQf 417 human
Q7ZXS8    340 qaesnLYMKAVRATLILVPLLGIEFVLFPWKPEGri--aEEIYDYVMHILMHYQGLLVATIFCFFNgEVQAVLKRHWNQy 417 African clawed frog
P32214    369 eaeayMYLKAVKATMVLVPLLGIQFVVFPWRPSNkv--lGKIYDYLMHSLIHFQGFFVATIYCFCNhEVQVTLKRQWAQf 446 Norway rat
P25117    349 eaeshMYLKAVRATLILVPLLGVQFVVLPWRPSTpl--lGKIYDYVVHSLIHFQGFFVAIIYCFCNhEVQGALKRQWNQy 426 pig
NP_001733 332 eaeshMYLKAVKATMILVPLLGIQFVVFPWRPSNkm--lGKIYDYVMHSLIHFQGFFVATIYCFCNnEVQTTVKRQWAQf 409 human
Q68EK2    333 qakssLYMKAVRATLILVPLLGIQYVLLPYKPSGrv--sAEIYDYIMHILMHYQGLLVATIFCFFNgEVQAVLRRHWNQy 410 zebrafish
Q16602    325 qaesnLYMKAVRATLILVPLLGIEFVLIPWRPEGki--aEEVYDYIMHILMHFQGLLVSTIFCFFNgEVQAILRRNWNQy 402 human
ACR48173  329 kaesnLYMKAVRATLILVPLLGIEFVLFPWRPEGri--tEEVYEYVMHILMHYQGLLVATIFCFFNgEVQAVLRRHWNQy 406 chicken
BAI63096  289 nn-iqRYIGAIKATLVLIPLLGSQHILLTIALYIpnasvLRVLSYITNVLSSFQGFAVAIIFCFCHeEVGRITSLSRSKs 367 Ciona intestinalis
P30988    366 eaeshMYLKAVKATMILVPLLGIQFVVFPWRPSNkm--lGKIYDYVMHSLIHFQGFFVATIYCFCNnEVQTTVKRQWAQf 443 human
Feature 1              
5UZ7_R    418 kiQWNQRWG 426 human
Q7ZXS8    418 riQFGSFAH 426 African clawed frog
P32214    447 kiQWSHRWG 455 Norway rat
P25117    427 qaQRWAGRR 435 pig
NP_001733 410 kiQWNQRWG 418 human
Q68EK2    411 riQFGSTIT 419 zebrafish
Q16602    403 kiQFGNSFS 411 human
ACR48173  407 kiQFEHSFS 415 chicken
BAI63096  368 syHVDVAFL 376 Ciona intestinalis
P30988    444 kiQWNQRWG 452 human

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