2X2H,4AMW


Conserved Protein Domain Family
GH31_lyase_GLase

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cd06601: GH31_lyase_GLase 
Click on image for an interactive view with Cn3D
alpha-1,4-glucan lyase
GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Statistics
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PSSM-Id: 269887
Aligned: 9 rows
Threshold Bit Score: 537.765
Created: 19-Sep-2008
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitecatalytic site
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:4AMX, Gracilariopsis lemaneiformis alpha-1,4-Glucan Lyase with bound 5-fluoro-glucosyl-fluoride, contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                          #                                      #                       
2X2H_A        345 KRSVMPPKYVFGFFQGVFGTssllrahmpagennISVEEIVEGYQNNNFPFEGLAVDVDMQdnlrVFTTK--GEFWtanr 422  Gracilariopsi...
WP_008504858  283 GRSAMPPKYVFGYHQGGYGYfn-----------sSILAVVANSYRAANIPIDGLHIDVDFQdnyrTFTSSk-MKFPnv-- 348  Mucilaginibac...
EDY81506      285 GRAPMPPRYAFGFQQGAYGYfd-----------rYKLTAAGTSYRAARIPCDGLHIDVDFQdnyrTFTHSk-MKFPha-- 350  Verrucomicrob...
YP_008146879  297 GRPTMVPRYVFGYHQGAYGYys-----------rEVLEQVAQSFRDASFPIDGLHIDVDFQnnyrTFTSSd-KKFPnv-- 362  Sorangium cel...
YP_003842596  293 GKSRLKPRYALGYHQGCFGYdnr---------ekVEAAVSAYRSKDIDIPLDGIHIDVDIQrnhkTFTIDakDKFHnp-- 361  Clostridium c...
WP_017312191  306 GRSRLKPRWALGYHQGCYGYed-----------rGALEWTVRKHRDYQIPLDGLHVDVDVQdkyhTFTINt-DRFPdp-- 371  Fischerella s...
CAB52260      336 GRSKLKPRYILGAHQACYGYqq-----------eSDLYSVVQQYRDCKFPLDGIHVDVDVQdgfrTFTTNp-HTFPnp-- 401  Morchella cos...
EJU04376      342 GRPHLKPRYVLGNHQGCYGYrt-----------rEDLETVVAEYRAARIPLDGLHIDVDFQdryrTFTWNe-DKFPdv-- 407  Dacryopinax s...
4AMW_A        345 KRSVMPPKYVFGFFQGVFGTssllrahmpagennISVEEIVEGYQNNNFPFEGLAVDVDMQdnlrVFTTK--GEFWtanr 422  Gracilariopsi...
Feature 1                                  #                                                      
2X2H_A        423 vgtggdpnnrSVFEWAhDKGLVCQTNITCFLRndnegqdyevnqtlrerqly---------------------------- 474  Gracilariopsi...
WP_008504858  349 ---------sNFMDYLhSIGFKCSTNITPLMTanpldengeasvyqqrknmm---------------------------- 391  Mucilaginibac...
EDY81506      351 ---------kELFDDLhTIGFKMSTNITPIITtnqlnqegakapyaqrdal----------------------------- 392  Verrucomicrob...
YP_008146879  363 ---------sEMFSQLaAQGFKCSTNITALVTcnpydedgktydegglryatr--------------------------- 406  Sorangium cel...
YP_003842596  362 ---------kEMFSNLrAQGVKCSTNITPIINmenpedagdpennptyksfyegieknyfivdn---------------- 416  Clostridium c...
WP_017312191  372 ---------kGMFANLkAQGVKCSTNITPIISsnqksyyktytegvekgyfvkdqrffgdlnlnnp-------------- 428  Fischerella s...
CAB52260      402 ---------kEMFTNLrNNGIKCSTNITPVISinnreggystllegvdkkyfimddrytegtsgnakdvr---------y 463  Morchella cos...
EJU04376      408 ---------pGMFAELrEKGVKCCTNITPVISlkdegegddyptlqeglaknyfipdtrylegtsgkpedvrytyywgnl 478  Dacryopinax s...
4AMW_A        423 vgtggdpnnrSVFEWAhDKGLVCQTNITCFLRndnegqdyevnqtlrerqly---------------------------- 474  Gracilariopsi...
Feature 1                                                    ##                                   
2X2H_A        475 -----------------tkndsltgtdfgmtddgpsDAYIGHLDYGg--------------------GVECDALFPDWgR 517  Gracilariopsi...
WP_008504858  392 ----------------dvngsngliyntragqgespNLYAGTVSYGmnlgnnpypapplqpnnqgqiPLQATGNYADFsR 455  Mucilaginibac...
EDY81506      393 ------------------esanallydtryesgespELYQGGVNYGnnrgnnpypspplhfnnqglmPLTAPGNYPDFgL 454  Verrucomicrob...
YP_008146879  407 ---------------deglandyfifntrvnqgsspQQFIAQENYGvnyglnpftspplqkdsegytPLISCGFYPNLgD 471  Sorangium cel...
YP_003842596  417 ----rsesedfdaknyhyyefgnlttsvadnnfnngKPYIGGINYGg--------------------GIRFKGHYPDFgR 472  Clostridium c...
WP_017312191  429 ---edlnkgysyqnfdppgqesvffaydpehnantnNPYIGEVYYGndrl--------------tgqEMGTPGHYPDLgR 491  Fischerella s...
CAB52260      464 myygggnkvevdpndvngrpdfkdnydfpanfnskqYPYHGGVSYGy--------------------GNGSAGFYPDLnR 523  Morchella cos...
EJU04376      479 deqglpvpqevdpnlgsstpvyeqnystfadnfnsgSPYHGGVSYGa--------------------ELGTPGYYLDLnR 538  Dacryopinax s...
4AMW_A        475 -----------------tkndsltgtdfgmtddgpsDAYIGHLDYGg--------------------GVECDALFPDWgR 517  Gracilariopsi...
Feature 1                                # ##                                    #                
2X2H_A        518 PDVAEWWGNNY-KKLFSIGLDFVWQDMTVPAMmphkigddinvkpdg-nwpnaddpsngqynWKTYHPQVLVTdmryen- 594  Gracilariopsi...
WP_008504858  456 EDVRKKWGDQYiHLINEVGMDMIWQDMTDPAIan--------------------------ppASTFPLDLMQSngit--- 506  Mucilaginibac...
EDY81506      455 TSVREAWGAQYkHLIQDIGLDMIWQDMTCPAIdpnlp--------------------pdaeyYKTFPQDLMMAqeetdan 514  Verrucomicrob...
YP_008146879  472 PAVQAWWGQQY-EGLLSAGLEMIWQDMTCPAIeydrtpqsgeyvpyeqlldfntsdhddcdeVKTLPLDLMMVgpdgk-- 548  Sorangium cel...
YP_003842596  473 KEVRYWWGKQY-QYLFDMGLEMVWQDMTTPAIaplqrdynfn-----------eepkygygdMKSFPARLNITddfvkaf 540  Clostridium c...
WP_017312191  492 QEVRDWWGKQY-QYLFDMGLEMVWQDMTTPAIrsr------------------------rgdMRGFPFRLLVTddsivge 546  Fischerella s...
CAB52260      524 KEVRIWWGMQY-KYLFDMGLEFVWQDMTTPAIhts------------------------ygdMKGLPTRLLVTsdsvtna 578  Morchella cos...
EJU04376      539 PEVRDFWGQQY-EKLFEAGLEFVWQDMTTPAIatg------------------------ygdMKGFPSRLWIStdphfte 593  Dacryopinax s...
4AMW_A        518 PDVAEWWGNNY-KKLFSIGLDFVWQDMTVPAMmphkigddinvkpdg-nwpnaddpsngqynWKTYHPQVLVTdmryen- 594  Gracilariopsi...
Feature 1                                                                   #            #  #     
2X2H_A        595 ---------hgrepmVTQRNIHAYTLCESTRKEGIVEnad------tltKFRRSYIISRGGYIGNQHFGGMWVGDNSTTS 659  Gracilariopsi...
WP_008504858  507 -----------yvphATIHNEYALNLVNATYSGLQRLs-----------PEKRPFIIARGGYAGMQRYAALWTGDSASSW 564  Mucilaginibac...
EDY81506      515 gn-----vtvtykpnAQLHNSYVNNLLDGTWNGINKLa-----------PDRRNFIIARGGYAGMQRYAGLWTGDSASSW 578  Verrucomicrob...
YP_008146879  549 ----------tyqphALLHNGYALSLCKATFNGINALr-----------PGRRNFIIARGGYAGVQRYAALWTGDSASSW 607  Sorangium cel...
YP_003842596  541 enddietnsysktpfIKAWNLYSYNLHKATYHGLNHLng---------rENKRNFIIGRGSFAGAHRFSALWNGDNASTW 611  Clostridium c...
WP_017312191  547 --------epkltpaIKVWNLYSYNLHKATYHGLNNLvyseqsdkpgqrRKDRNFIVGRGSFTGAHRFAALWTGDNSSTW 618  Fischerella s...
CAB52260      579 ---------sekklaIETWALYSYNLHKATWHGLSRLes---------rKNKRNFILGRGSYAGAYRFAGLWTGDNASNW 640  Morchella cos...
EJU04376      594 pg-----qppprktaAELWALYSFNLHKATYLGLNKLec---------rENKRNFIVGRGSFSGMHRYAGLWTGDNASTW 659  Dacryopinax s...
4AMW_A        595 ---------hgrepmVTQRNIHAYTLCESTRKEGIVEnad------tltKFRRSYIISRGGYIGNQHFGGMWVGDNSTTS 659  Gracilariopsi...
Feature 1                                    #                                             #      
2X2H_A        660 NYIQMMIANNINMNMSCLPLVGSDIGGFTsydnen-------------qrtpcTGDLMVRYVQAGCLLPWFRNHYDrwie 726  Gracilariopsi...
WP_008504858  565 DFLQINIPEVLNIGLSGIPISGCDIGGFAvsndpngttsgfyvsygkvyggitNYELFTRWIQLGAFLPWFRNHYNgynk 644  Mucilaginibac...
EDY81506      579 DFLQINLPEVLNIGLSGVPISGCDIGGFAngsgttsasiv---iggsivggitNYELLTRWMQLGSFLPWYRNHYDgynk 655  Verrucomicrob...
YP_008146879  608 DFLKINIPEVLNLGLSGVPISGCDIGGFAtgsgst------------qegyvtDPALFVRWMNVGAFLPWYRNHYDhyek 675  Sorangium cel...
YP_003842596  612 DFMRINISQCLALGLTGQAMSGQDIGGFEkgsdg---------------ekwiDPELLIRWTSMGAFLPWFRNHYNgkae 676  Clostridium c...
WP_017312191  619 DFLKMNVSQVMSLGMTGVTICGQDIGGFEqende---------------qhwvGPELFIRWVAAGAFLPWFRNHYMrkgr 683  Fischerella s...
CAB52260      641 EFWKISVSQVLSLGLNGVCIAGSDTGGFEpyrdang-----------veekycSPELLIRWYTGSFLLPWLRNHYVkkdr 709  Morchella cos...
EJU04376      660 DFWHISVAQVLALGYIGVTIAGSDMGGFMpngd----------------ekfcDPDLLIRWYSGSVLLPWHRNHYIrrsg 723  Dacryopinax s...
4AMW_A        660 NYIQMMIANNINMNMSCLPLVGSDIGGFTsydnen-------------qrtpcTGDLMVRYVQAGCLLPWFRNHYDrwie 726  Gracilariopsi...
Feature 1                                                                     
2X2H_A        727 skdhgk--------------dyqelymypNEMDTLRKFVEFRYRWQEVLYTAMYQNAAFG 772  Gracilariopsis lemaneiformis
WP_008504858  645 qfq-------------------eiyaygePVPTNCRKYIQLRYRLIQLFYDAMYEWTLNG 685  Mucilaginibacter paludis
EDY81506      656 qfq-------------------eafaygePVPTNCRKYVELRYRMMQVYYDAMYEWTQSG 696  Verrucomicrobiae bacterium DG1235
YP_008146879  676 wyq-------------------epysygePYLSYCRKYVELRYRLNQVFYDAMYRATQTG 716  Sorangium cellulosum So0157-2
YP_003842596  677 igkqfqepykfk--dvsesdkgsykymydAVLPICKYFIELRYRLMQLFYDRLFENTLNG 734  Clostridium cellulovorans 743B
WP_017312191  684 kefqeifmyeewfnqhrggqlpepqdlyrAVLPACKYYIELRYRLLQVFYDAMFENTFDG 743  Fischerella sp. PCC 9339
CAB52260      710 kwfqepysypkh--lethpeladqawlykSVLEICRYYVELRYSLIQLLYDCMFQNVVDG 767  Morchella costata
EJU04376      724 ekwfqepyqytnylrdhpeieadqgwlysAVEPICRYYVSLRYSLMQLLYDKMFENQVNG 783  Dacryopinax sp. DJM-731 SS1
4AMW_A        727 skdhgk--------------dyqelymypNEMDTLRKFVEFRYRWQEVLYTAMYQNAAFG 772  Gracilariopsis lemaneiformis

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