Conserved Protein Domain Family
RhoGAP_OCRL1

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cd04380: RhoGAP_OCRL1 
RhoGAP_OCRL1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and a C-terminal Rho GAP domain, this GAP domain lacks the catalytic residue and therefore maybe inactive. OCRL-like proteins are type II inositol polyphosphate 5-phosphatases that can hydrolyze lipid PI(4,5)P2 and PI(3,4,5)P3 and soluble Ins(1,4,5)P3 and Ins(1,3,4,5)P4, but their individual specificities vary. The functionality of the RhoGAP domain is still unclear. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239845
Aligned: 25 rows
Threshold Bit Score: 166.747
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:
  • Comment:based on homology to other RhoGAPs
  • Comment:domain is lacking catalytic residues and is therefore potentially inactive
  • Citation:PMID 9262406
  • Citation:PMID 9338791

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
XP_417756 1201 FLSVTGNYLPSCFGSPIHTLCymrepiqdmsaesirnltlmplemsdnatqaekpleIPKELWMMVDHLYr---nASQQE 1277 chicken
XP_648298  768 SFSVIAKTPTSVIGMRLESLNrlarpllgsin--------------keinysivpfyIPKELYRLTNYII-----DHYQQ 828  Entamoeba histol...
XP_650540  718 TFSIVLKTTPNIIGMNLETLNrlnkplisndk--------------iqkkyqpipffIPKEIYRLIDYII-----QHYEP 778  Entamoeba histol...
XP_649653  599 PIVVKVYPKQSCIGMSLKSLSllnrpvrgnv----------------lnsyqglpftIPKEIYRLVDKLLsl--sNEELQ 660  Entamoeba histol...
XP_656367  565 FITSKIDIVDSIFGKDLKTVTsmkdpyqsveg---------------sittglinqqIPKEIWRLGSDIIs----EIKAD 625  Entamoeba histol...
EAS30678   722 FISVRGKWLLSCFGLSLEELTripeggirsldvasls-----pylsgnnqidnirtsAPRELFRLTEAVAelterSIAEW 796  Coccidioides imm...
BAE62367   691 FIPVYGEWLPTCFGRSLEELTvmpeagartlpvte--------imrrqkdevgiplsAPRELFRLTESISelserAIAEW 762  Aspergillus oryzae
XP_382266  690 FIPVRGVWQPSCLGRSMAELIripdggirkfvqdkg-------iggaipydsavqcsAPKELFRLTEVVQtlverSLAEA 762  Gibberella zeae ...
CAD21299   728 FIPVRGVWMPTCIGRSIDELIrvpegglrkfvhsltak--nsgkvmsvpeemdvhcaAPRELFKLTEALEsvterVLADE 805  Neurospora crassa
EAT83583   708 FLPLRAHWLPSALARTVDKLIkipeggirklqn-------------qipdrgevkwsVPREIFRLTEAIEnlterTLAEW 774  Phaeosphaeria no...
Feature 1         #                                                                         #  
XP_417756 1278 DLFQQPGLRse------------------------------fEQIRDCLDKgmhdt---------llgsNHSVAEALLLF 1318 chicken
XP_648298  829 SCFVEIRPSvyts--------------------------qemRSVIHSLNTespf----------pngpIQLFCDASLMF 872  Entamoeba histol...
XP_650540  779 NCFVKKDPCnylk--------------------------eqlIEVIQCLNKekef----------isgpIQLYCDALLLV 822  Entamoeba histol...
XP_649653  661 NCFIQKSTPtq------------------------------rQEVLDSIDKdsqfl---------pgilASSYLDILLVV 701  Entamoeba histol...
XP_656367  626 TLIQHPTEVt-------------------------------vREVLHSINTnsry----------ttksASAMLQGLSYF 664  Entamoeba histol...
EAS30678   797 GMIGNGDDTennarpwgcqragwpfepetwslrnsrerykllGLIREGLDTgapffaqfp-aevpsryrAELLAETLLAF 875  Coccidioides imm...
BAE62367   763 SMIRGESEDsppwvrephgfgwpfe-peswtltdkeerssllASVREALDTnkpfnhvis-pevsslhrLEILSETLLVF 840  Aspergillus oryzae
XP_382266  763 TMLEEEVLPrdpgwplesstw----------rvgeddmqdakAKLVSALDSdgslldalp-lewpasfkLEVVCSILLLF 831  Gibberella zeae ...
CAD21299   806 QMLEEYKVPrssgwpfeedtw---------rvtdkslrasraADLIDALDEgmvhivdafsaevpaverIETVAEVLTLF 876  Neurospora crassa
EAT83583   775 EMTKSEGERapfkdnagwpfikny----ktsnngsldheeelAALYDALDCdtafaeafe-petrstekVEMLSEVLITF 849  Phaeosphaeria no...
Feature 1       #                                                                              
XP_417756 1319 LESLPEPVICySFYSSCLEc-------------------aNNYVLSSQIIs--nLPECHKNVFEYLMAFLRELLKns--- 1374 chicken
XP_648298  873 ISGLHECCIYyNISENSSV---------------------LNDSKINQIIkf-aTPDEYRRLFFYLISFLKKLIE----- 925  Entamoeba histol...
XP_650540  823 LSGLHKCVIFySFTDSDLV---------------------LNDQTLLQVVnf-iIPDEYNHLFVYLITFLKKLIC----- 875  Entamoeba histol...
XP_649653  702 LAGFQDSLLHdNFISEIKYyv------------------nNLELAKRYVIy--mMEETHRNVFLYILKTIKELIE----- 756  Entamoeba histol...
XP_656367  665 LMALPDSLIPsSRFYDVTTc--------------------KTKVDAYAVVn--sLPNENYSLFFYITVLIRQIVEsi--- 719  Entamoeba histol...
EAS30678   876 LRSLYDGLITrALWSEVESqvfsyek--------smsaslSPEQSQSQVLealaSSPAHSVSFTFLTFMLNRISSeiapl 947  Coccidioides imm...
BAE62367   841 LRSLKDGIVTaPVWSDLDQqilarek--------tkapplSWEESQAWVLeslaYSPAHSVSFTFVTFMLARIANevapv 912  Aspergillus oryzae
XP_382266  832 LESLTDGLIPtHLWAKLSTslpnvt----------svpptAWSDTKTQVLdilsMAPNHNIAFVFLTATLSRAASeltpv 901  Gibberella zeae ...
CAD21299   877 LRGLTDGIITtSLWSRIEQaslvslgqgapasskippqetAYEQDKGTILdilsTAPNHNISFVFLTATLAKVTTdlspi 956  Neurospora crassa
EAT83583   850 LSSLTDGIITkSLWERLEEglvtre---------ksrqhlDPDDEKMWALeilaSAPSHNASFLLLLSFLQNIANqisea 920  Phaeosphaeria no...
Feature 1                                                                                      
XP_417756      --------------------------------------------------------------------------------      chicken
XP_648298      --------------------------------------------------------------------------------      Entamoeba histol...
XP_650540      --------------------------------------------------------------------------------      Entamoeba histol...
XP_649653      --------------------------------------------------------------------------------      Entamoeba histol...
XP_656367      --------------------------------------------------------------------------------      Entamoeba histol...
EAS30678   948 vpppistpvspitpttpsissldrrstdlteplspsismaapilprpsitfsfpfrsrsrtlsssddnnvpvshsrppts 1027 Coccidioides imm...
BAE62367   913 ismpprqssekpsdeqvnpnkqptsptat------------------------------aaaaavaaagnirrrtltfts 962  Aspergillus oryzae
XP_382266  902 ttdpkpglsrr-------------------------------------------------------------------ls 914  Gibberella zeae ...
CAD21299   957 tksdlellksdtpvrlsvlnr----------------------------------------------rsltaglvkrnts 990  Neurospora crassa
EAT83583   921 skpqpetprtsvdlp----------------------------------------------------------aspnvkv 942  Phaeosphaeria no...
Feature 1                         #  ##                           #         
XP_417756 1375 -----------gkNNLDVNILASIFGGLLLRpppghpm---pditekRKAQQFIHQFLLRE 1421 chicken
XP_648298  926 -------------MGEDKIILVTRFAPHIFRcy-------------nPTKISPFIHFLSTV 960  Entamoeba histolytica HM-1:IMSS
XP_650540  876 -------------LGENELLLISRFTPPIFRcf-------------dPNKLLPFTHFLEYV 910  Entamoeba histolytica HM-1:IMSS
XP_649653  757 -------------RGLDRRTVIHLFGLTMLHtkkd--------dyetQQMCERILTLLLDS 796  Entamoeba histolytica HM-1:IMSS
XP_656367  720 -----------nnKTITLQTVCDFFSRLILRhpts--------sviiKENIERISNFLMNF 761  Entamoeba histolytica HM-1:IMSS
EAS30678  1028 satiniatssiarRQAVNKAFVAIFADVIYSkdipvpekdkerrvlaERKRSVIEPFLRSE 1088 Coccidioides immitis RS
BAE62367   963 nvpeptanplairRQAVETALAGIFSTVLISanvpvpakdkerraqeDRKRSIIEPFLKTI 1023 Aspergillus oryzae
XP_382266  915 frrgnaqeedskkRKMREHRYAEIVGPMVCRideke-------kgarDRARTVVEMFIMRD 968  Gibberella zeae PH-1
CAD21299   991 sgssgqamaamaaRQAKERSFAEVFGELVCRapvqkgmkdkerkaveEKQQAVLELFLRRR 1051 Neurospora crassa
EAT83583   943 rrrtlskvhevavKQLIIRNYAVIFSSAMFRckeeakfkekdkaarkERMVRIVELFLSSG 1003 Phaeosphaeria nodorum SN15

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