Conserved Protein Domain Family
ABC_DrrA

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cd03265: ABC_DrrA 
Daunorubicin/doxorubicin resistance ATP-binding protein
DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Statistics
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PSSM-Id: 213232
Aligned: 10 rows
Threshold Bit Score: 365.925
Created: 12-Dec-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:Walker A, Walker B, Q-loop, D-loop, and H-loop form the nucleotide binding site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        ## ###                                      #
P32010      9 IETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTARVFGHDVTSEPDTVRRRISVTGQ 88  Streptomyces peuce...
AAB85582    5 IETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGTVNGYDIVRDARKVRESIGIVFQ 84  Methanothermobacte...
NP_070709  80 IEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKAFVAGLDVVREAREVRRRIGIVFQ 159 Archaeoglobus fulg...
NP_142837   7 IIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIVAGHDVVKESREVRKKIGVVFQ 86  Pyrococcus horikos...
NP_148704  10 VVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWIAGYSIVREPGNVRRVIGLVPQ 89  Aeropyrum pernix K1
NP_229204   5 IVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKEPREVRRKIGIVFQ 84  Thermotoga maritim...
NP_558489   4 IVVENLVKRYGDVEALRGISFEVSRGEVFGLLGPNGAGKTTTIKILTGLTKPTSGRAIVAGFDVVKEAAEVKRSIGWIAS 83  Pyrobaculum aeroph...
NP_661090  10 IQTDRLTRSFGSNVAVRELNLTVRSGEIFGLLGPNGAGKTTTIKMLTTMLPPSSGAATVAGHSILCDSIGVRKRIGYVSQ 89  Chlorobium tepidum...
NP_962467 116 IDAKHLTYRYGQFTAVDDVTLQVRPGETMGLLGPNGAGKTTMVRMLTTLAPVQQGELHIFGLDARRRTTDIRANIGYVPQ 195 Mycobacterium aviu...
CAF29723    4 IEVKNLVKKFDTNVAVNNVSFSVNKGEIFAFLGPNGAGKSTTINILTTLLKATSGSAVISGFDASKDPKKVRKTIGIVFQ 83  Methanococcus mari...
Feature 1                                                                                ##   
P32010     89 YASVDEGLTGTENLVMMGRLQGyswarareRAAELIDGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTT 168 Streptomyces peuce...
AAB85582   85 SRALDDILTGREHLEMHAALYGvprdvrdrRIEEVLELIALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTL 164 Methanothermobacte...
NP_070709 160 DPSVDRDLTAYENMLVHGGVYGlkgkelkeKIERLLKFVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTI 239 Archaeoglobus fulg...
NP_142837  87 DPSVDRELTAWENMYIHGRIYGlkgqelkkKIEELLKFVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTI 166 Pyrococcus horikos...
NP_148704  90 DLTADDEMSGWDNVYIQARLYGlpsseareRTREVLDYLDLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTL 169 Aeropyrum pernix K1
NP_229204  85 DQSLDRELTAYENMYIHGKIYGyggeklkkRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTI 164 Thermotoga maritim...
NP_558489  84 EVIVDDELTGWENLEIQARLAGvkn--wreRAAELLRYFGLAEAANRLVGKYSTGMRKRLEVAMALLHGPEILFMDEPTV 161 Pyrobaculum aeroph...
NP_661090  90 MISADGALTGFENLLLFARIYNvprrkrtqRIDETLAFMGLTEARDKLVCTYSGGMIRRLEIALSMLHRPEVLFLDEPTI 169 Chlorobium tepidum...
NP_962467 196 QLSVEPALTGRQNVAWFARLYGvpgaeraqRVDQALAAMDLLDVADRLASAYSGGMIRRLEVAQALVNRPSLLVLDEPTV 275 Mycobacterium aviu...
CAF29723   84 DSTLDNQLTAYENLYIHGKIYGykgeilknRIDELLDFVELLEFKDKIVRNFSGGMVRRLEIARSLIHEPEILFLDEPTI 163 Methanococcus mari...
Feature 1                                  #                              
P32010    169 GLDPRSRNQVWDIVRALvda-gtTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELK 227 Streptomyces peucetius
AAB85582  165 GLDPQTRESIWRYIEKLnreedvTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLK 224 Methanothermobacter thermautotrophicus...
NP_070709 240 GLDPQTRAHVWSYIEAMkeeqdmTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELK 299 Archaeoglobus fulgidus DSM 4304
NP_142837 167 GLDPQTRAHIWEYIKTMkeehdmTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELK 226 Pyrococcus horikoshii OT3
NP_148704 170 GLDVHSRRSLWRYIEDLkrs-avTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELK 228 Aeropyrum pernix K1
NP_229204 165 GLDPHTRAHMWEYISKMkkehnmTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELK 224 Thermotoga maritima MSB8
NP_558489 162 GLDVGARMGLWEVIRQInkdfgvTVLLTTHYMEEAEELCGRIAIINKGRLVAVGTPGELK 221 Pyrobaculum aerophilum str. IM2
NP_661090 170 GLDPAARLQVWKRLKELletfgtTILLTTHDMEEAEELCDRIAIMKEGVIAAEGSAEELK 229 Chlorobium tepidum TLS
NP_962467 276 GLDPIARDGVWEHVQKMqarfamTVLLTTHYMEEADALCDRVALMHRGALRAVGAPDELK 335 Mycobacterium avium subsp. paratubercu...
CAF29723  164 GLDPQTRSHIWEYIKKMqaknnmTIFLTTHYMEEAELLADKVAIIDNGKIIAEGTVNELK 223 Methanococcus maripaludis S2

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