1TOA,1N2Z,1PSZ,1K0F,1EFD,1K7S


Conserved Protein Domain Family
TroA-like

?
cd00636: TroA-like 
Click on image for an interactive view with Cn3D
Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between two globular domains linked by a single helix. Many of these proteins also possess a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). The TroA-like proteins differ in their fold and ligand-binding mechanism from the PBPI and PBPII proteins, but are structurally similar, however, to the beta-subunit of the nitrogenase molybdenum-iron protein MoFe. Most TroA-like proteins are encoded by ABC-type operons and appear to function as periplasmic components of ABC transporters in metal ion uptake.
Statistics
?
PSSM-Id: 238347
Aligned: 367 rows
Threshold Bit Score: 31.7603
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
intersubunit
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:intersubunit interface [polypeptide binding site]
Evidence:
  • Comment:defined using 3.5 A
  • Structure:1TOA_A
    View structure with Cn3D

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                       
1TOA_A       39 PLVVTTIGMIADAVKniaq-------gdvhLKGLMgpgvd-------------------------phlyTATAGDVEWlg 86  Treponema pallidum
NP_214486    18 LNVVVTYPWIGDLVDkigk-------ekvkVYIIAkgted-------------------------phfvVPKPSHIAKlr 65  Aquifex aeolicus...
NP_759357     7 LNVFVCQPDWADLVRqhap-------dariYSATTamqd--------------------------phyvQARPSLIAQmr 53  Vibrio vulnificu...
NP_617670    43 IIIIDALGREVILDKpaeriaythysvaevLKAIGawdrvvardgyisdenfypnldeipaicparnpmDINYEKTVEv- 121 Methanosarcina a...
P44526       23 ADVLASVKPLGFIVSsiad-------gvtgTQVLVpagas-------------------------phdyNLKLSDIQKvk 70  Haemophilus infl...
NP_716200    18 LNVFACEPEYAALAKelap-------nasiYSATTalqd--------------------------phqvQARPSLIAKmr 64  Shewanella oneid...
Q9ZEC9       50 KIVVSITPISSILAMlvkd--------kvdIESLAvnnec-------------------------phhhNIKPSDITKvr 96  Rickettsia prowa...
NP_800817    36 LDIFVCEPEWKALLQrhap-------eaniYSATTdkqd--------------------------phyvQARPSLIAKmr 82  Vibrio parahaemo...
NP_897064    53 PSVVAVDGTLCDITRtvvg-------aaakVTCLIppggd-------------------------phgyRLKPSDRQAia 100 Synechococcus sp...
ZP_00063466  28 GDTTEAQDTAVKITTdnpa-------yqqiAKAIAgkkgrvs---------------------lmsgnlKTAQQKTKFk- 78  Leuconostoc mese...
Feature 1                         ##  #                                                         
1TOA_A       87 NADLILYNGLHlet--kmGEVFSklrg--srlVVAVsetipvsqrlsle------------------------------- 131 Treponema pallidum
NP_214486    66 RADLLIIQGASlei-gflPPLLSqsn---npkIQPGtkgfldlstfieliekpkev------------------------ 117 Aquifex aeolicus...
NP_759357    54 RADLVVCSGAElei-gwlPELQRqsr---npkVQNGqtglfwvsdyvqmldkheql------------------------ 105 Vibrio vulnificu...
NP_617670   122 QPDVLILPKFEwyd-dtdEIINRlep---dipVVFVdtl----------------------------------------- 156 Methanosarcina a...
P44526       71 SADLVVWIGEDids--flDKPISqier--kkvITIAdladvkpllskahhehfhedgdhdhdhkhehkhdhkhdhdhdhd 146 Haemophilus infl...
NP_716200    65 QADLVVCAGADlei-gwlPMLQMksanakvhsTEQGlffaaeqidtldklasvdr------------------------- 118 Shewanella oneid...
Q9ZEC9       97 NADMVIYINEQfdg--ftEKLISn-------nNQNIikisdiksltti-------------------------------- 135 Rickettsia prowa...
NP_800817    83 QADLAMCSGAElev-gwlPMLQArss---naaVQNGaksmiyaasfvrmldthqhv------------------------ 134 Vibrio parahaemo...
NP_897064   101 TSAAVVHIGFGl-----tPAANEitsp--gsvVAVGeqalpnykgd---------------------------------- 139 Synechococcus sp...
ZP_00063466  79 KSELLLTDDHTsallteaQKLHSsp------kLVIAsdyihtdss----------------------------------- 117 Leuconostoc mese...
Feature 1                                                #                                      
1TOA_A      132 ------------------eaefdphvwfdvkLWSYSVKAVYEslckllpg--------ktreftqRYQAYQQQLDKLDAY 185 Treponema pallidum
NP_214486   118 -----------sramgdvhpegnphynldphNIPVLAQAIKDrlclidpgnce-fygknlneflaKWNEKLEVWDREFST 185 Aquifex aeolicus...
NP_759357   106 -----------dramgdvhahgnphvqfalaDMPAVSRALADrlalidpdnqs-lykgmgvkfrhAWQKRLSVWREQARS 173 Vibrio vulnificu...
NP_617670   157 ----------------------------npdSFCDTVQIIGTivg-----------------nedEAQEYIEFYSGIYDP 191 Methanosarcina a...
P44526      147 hkhehkhdhehhdhdhheglttnwhvwyspaISKIVAQKVADkltaqfpd--------kkaliaqNLSDFNRTLAEQSEK 218 Haemophilus infl...
NP_716200   119 -------------smgdvhakgnphihfdpnRVLTVAKALTAkmsqlepseaa-nyqksladfssRWQAAIPRWEEQAKP 184 Shewanella oneid...
Q9ZEC9      136 --------------------knnwhiwldlnNAKILLQEFAQifiknfpqlqk-einnnlpialkELNKLQDIKNNEFRT 194 Rickettsia prowa...
NP_800817   135 -----------drsmgdihahgnphvqfaanDMITLSRVVTQclqavdpenap-tyqlngmkfraHWRKKLNEWEAKAKP 202 Vibrio parahaemo...
NP_897064   140 ----------------------dphvwhdpaNSAAMLSALSTalipvlpaseteafkerataaiaVFNDLGRWGAIQFET 197 Synechococcus sp...
ZP_00063466 118 ----------------------tqkyylspnTTVVMAQQIVNylsdmdpr--------nrdiyveNNKQFVEKTSDLTTL 167 Leuconostoc mese...
Feature 1                            
1TOA_A      186 VRRKaqsl---paerRVLVTA 203 Treponema pallidum
NP_214486   186 FRGTrvisy--hsvfNYLLRR 204 Aquifex aeolicus VF5
NP_759357   174 LRDMqvvgy--hqtyRYLYAW 192 Vibrio vulnificus CMCP6
NP_617670   192 IVAKtsqiaqedslnVFYKAF 212 Methanosarcina acetivorans C2A
P44526      219 ITAQlan-----vkdKGFYVF 234 Haemophilus influenzae
NP_716200   185 LKGKkviay--htsfRYLFNW 203 Shewanella oneidensis MR-1
Q9ZEC9      195 IKDIills----dssEYFFLN 211 Rickettsia prowazekii
NP_800817   203 LNGKqvvgy--hstyRYLFDW 221 Vibrio parahaemolyticus RIMD 2210633
NP_897064   198 LSQPqrvivtdhktySHLADR 218 Synechococcus sp. WH 8102
ZP_00063466 168 YTILkki------kdIRYVAT 182 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap