Conserved Protein Domain Family
murD

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PRK03369: murD (this model, PSSM-Id:179571 is obsolete)
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
Statistics
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PSSM-Id: 179571
Aligned: 25 rows
Threshold Bit Score: 624.077
Created: 9-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
226307041   5 ADSENDLSWLRGTRVLVAGGRVSGQATIEPLV---ALGAVVTVADSTLDFAQRCAELGaDMVTTTSiedAPDSI----TE 77 
108800224   1 MARAVVEPLTPGVRVLITGAGLTGRSVSAVLE---PTGVRLTICDDDPLALQRLITPA-AVVTTGE---AVAGI----AD 69 
126435847   1 MARAVVEPLTPGARVLITGAGLTGRSVSAVLE---PTGVRLTICDDDPLALQRLITPA-AVVTTGE---AVAGI----AD 69 
119869352   1 MARAVVEPLTPGVRVLITGAGLTGRSVSAVLE---PTGVRLTICDDDPLALQRLITPA-AVVTTGE---AVAGI----AD 69 
221229909   1 ----MLDTLVPGAPVLVAGGGVTGRAVLAALT---RFGMAATLCDDDPAALQQYADNGvATVSAAT---ATQQMfergRK 70 
118470144   3 DVTGDLAPLTPGARVLVTGAGITGRAVLGALA---PLEVAATLCDDNADALAALAAKGvAVIAPGD---AIASI----GD 72 
145223573   1 MSGPDVDDLA-GLSVLVTGARVTGQAILAALT---PLGARATLTDDSPTALTAFAQQGvEVLDPAA---AVERI----AA 69 
169629091   1 MTTCEVAELTGGTRVLVCGARVTGDAVVAALTglaDLGLRITVCDDDEDALQRHRDAGhGALTTAA---AQRHM----AD 73 
120404497   1 -----MQPISPGAAVLVVGAGITGRAVLAALA---PLGARATLTDDSPTALTASAQQRvEVLDPAT---AVDRI----AD 65 
226360232   2 TEEHGGLDWLRGRSVLVAGAGVSGRATIEPLR---DLGAHVTVTDSNVDALAECARRGaATVPIDDllaEREKV----AE 74 
226307041  78 YGLVVTSPGFRPDAPILAAAAGHGIPIWGDVEFSWRVDHSGHFGGPRKWLVVTGTNGKTTTTSMLASILDAAGVVGRACG 157
108800224  70 YALVVTSPGFPPTAPVLAAAAAAGVPIWGDVELAWRLDRAGWFGPPRRWLVVTGTNGKTTTTSMLYAILRAADRRAMLCG 149
126435847  70 YALVVTSPGFPPTAPVLSAAAAAGVPIWGDVELAWRLDRAGWFGPPRRWLVVTGTNGKTTTTSMLYAILRAADRRVMLCG 149
119869352  70 YALVVTSPGFPPTAPVLAAAAAAGVPIWGDVELAWRLDRAGWFGPPRRWLVVTGTNGKTTTTSMLYAILRAADRRAMLCG 149
221229909  71 YVLVVTSPGFAPTTPVLVAASAARVPIWGDVELAWRLDAAGYYGPPRRWLVVTGTNGKTTTTSMLHAMLAADNRRSLLCG 150
118470144  73 YALVVTSPGFAPSAPVLAAAAAAGVPIWGDVELAWRLDAAGRYGPPRRWLVVTGTNGKTTTTSMLHDMLVAGGRRSVLCG 152
145223573  70 FDLVVTSPGFPPTAPVLAAAADAGVPIWGDVELAWRLDRSGRFGPPRQWLVVTGTNGKTTTTSMLHAMLESAGRRAVLCG 149
169629091  74 QDLVIVSPGFGPSAPVVQAAVQAGLPIWGDVELAWRLDASGRYGRPKRWVVVTGTNGKTTTTAMVHDMLTAAGGTSALCG 153
120404497  66 FDLVVVSPGIPPTAPIPVAAAAAGIPVWGDVELAWHLDRSGRFGPPRQWLVVTGTNGKTTTTSMLYAMLQAGGRRAVLCG 145
226360232  75 FALVVTSPGFRPDAPLLSAAAGDGVPIWGDIEFSWHVDRAGLYGPPRRWLVVTGTNGKTTTTSMLQSILEAAGLPSLACG 154
226307041 158 NIGLPILDAL--------AetsPRVEYLAVELSSFQLHWAPSVRPDAGVVLNVAEDHLDWHGGMSAYAEAKSRALSGKVA 229
108800224 150 NIGNPVLDVLgesprtrgD---EEPELLAVELSSFQLHWAPSLRPDAGVVLNVAEDHLDWHGSMTAYARDKARALDGRVA 226
126435847 150 NIGNPVLDVLgesprtrgD---EEPELLAVELSSFQLHWAPSLRPDAGVVLNVAEDHLDWHGSMTAYARDKARALDGRVA 226
119869352 150 NIGNPVLDVLgesprtrgD---EEPELLAVELSSFQLHWAPSLRPDAGVVLNVAEDHLDWHGSMTAYARDKARALDGRVA 226
221229909 151 NIGRPVLDVL--------TefaEPSDFLAVELSSFQLHWAPSLRPEAGVVLNIAEDHLDWHSTMADYTMAKARVLTGRVA 222
118470144 153 NIGDPVLAVL--------D---QPAELLAVELSSFQLHWAPSLRPEAGVVLNVAEDHLDWHGSMAAYARDKARVLDGRVA 221
145223573 150 NIGDPVLTLL--------E---QPADVFAVELSSFQLHWAPSLRPEAGAVLNVAEDHLDWHGSMAAYAADKARALTGRVA 218
169629091 154 NIGDPVLNVL--------D---RDVEFLAVELSSFQLHWAPSVRPVAGAVLNVAEDHLDWHGGMEGYTRDKARALDGEVA 222
120404497 146 NIGDPVLSQL--------D---RPADVLAVELSSFQLHWAPSLRPEAGAVLNVAEDHLDWHGSMAAYAGDKARALTGRVA 214
226360232 155 NIGLPVLDAL--------RptgPRAEVLAVELSSFQLHWAPSVRPTAGAILNIAEDHLDWHGGMQPYIDAKARALTGEVA 226
226307041 230 VVGLDDAIASELGTRATADIVTGFRLGEPGEGELGVEAGHLVDNAFGDHVRLAEAASIDPAGPAGVMDALAAAALARALG 309
108800224 227 VAGLDDPVAAELLTTAAAPVRVGFRLGPPGAGELGVHDGWLVDNAFADGLRLARADDIRVAGPVGVLNALAAAALARAVD 306
126435847 227 VAGLDDPVAAELLTTAAAPVRVGFRLGPPGAGELGVHDGWLVDNAFADGLRLARADDIRVAGPVGVLNALAAAALARAVD 306
119869352 227 VAGLDDPVAAELLTTAAAPVRVGFRLGPPGAGELGVHDGWLVDNAFADGLRLARADDIRVAGPVGVLNALAAAALARAVD 306
221229909 223 VVGLDDSRAAALLSTTVAPVRVGFRFGEPAVGELGVRDGYLVDRAFAEDLALMPVTSIPVSGPVGVLDALAAAALARSVG 302
118470144 222 VVGLDDPVAAGLLPTAAATVRVGFRLGDPAAGELGVRDGKLIDRAFDDGVELADCADIGVAGPIGVLDALGAAALARAVG 301
145223573 219 VGGLDDEIAAGLLGSAPAAVKVGFRLGAPGPGEFGVRDGALIDNAFADGLELAAVDSIPVAGPVGVLNALAAAALARAVD 298
169629091 223 VAGLDDAIAGGLLAAAAAPVKAGFRAGEPAVGELGVLDGWLVDRAFGVDIPLIEVSKLPVGGPIGVLNALAAAALARAVG 302
120404497 215 VGGLDDAIAAGLLADAPAPVKVGFRLGDPGPGEFGVRDGVLIDNAFGRDLALADADTIPVAGPVGVLDALAAAALARAVD 294
226360232 227 VLGLDDEVASSLFSSSLAVRTLGFRLGVPAAGELGVEDGYLVDRAFADGERLAPADGITPPGPAGLMDALAAAALARAIG 306
226307041 310 FEADVVERGLAAHKVGPHRGALVGRVGSVVYIDDSKATNPHAARPSILAHDRVVWVAGGLLKGASVEQLVSEVGPRLSGA 389
108800224 307 VPAEAVAAALASFEVGRHRAEVVAVSGGVTWVDDSKATNPHAARASIAAYPRVVWIAGGLLKGVSVDALVAEVADRLAGV 386
126435847 307 VPAEAVAAALASFEVGRHRAEVVAVSGGVTWVDDSKATNPHAARASIAAYPRVVWIAGGLLKGVSVDALVAEVADRLTGV 386
119869352 307 VPAEAVAAALASFEVGRHRAEVVAVSGGVTWVDDSKATNPHAARASIAAYPRVVWIAGGLLKGVSVDALVAEVADRLAGV 386
221229909 303 VGATAIADAVALFRLGRHRAEVVAVADGIRYVDDSKATNPHAALVSVLAYPRVVWVAGGLLKGASVDAEVARMAPQLVGA 382
118470144 302 VAPGAIGAALASFQVGRHRAEVVGTVDGVVFIDDSKATNPHAAQASITAYDRVVWVAGGLLKGASVDELVRQVANRLAGA 381
145223573 299 VPAEAIATALAGFQVGRHRAEVVAVADGITYVDDSKATNPHAARASIDAYPRVVWIAGGMLKGASVEDLVSDSADHLVGA 378
169629091 303 TPAVHIARALEVFQVGRHRAELIARVADVAYVDDSKATNPHAAAASIAGYPRVVWIAGGLLKGAAVDDLVRDCADRLGAV 382
120404497 295 VPAAAIAEALATFHVGRHRAEVVAVADGITYVDDSKATNPHAAQASVSAFPRVVWVAGGLLKGASVDEMVEATKDRLVGV 374
226360232 307 VPPDAVAAGLAAHVVGPHRAARVAEVGGVTFVDDSKATNPHAARPSILAHDRVVWIAGGLLKGARVDDLVREVAGRLAGA 386
226307041 390 VLLGRDAGVIEDALARHAPDVPVVHVLSGDDEAVSENSSNSTLTIRLPSG-------ADADAVMAAVVVEAAELASPGDA 462
108800224 387 VLIGRDRAVVAEALSRHAPDVPVVELVTGEDSGVHGTTESAVNHVTRVIDtg---grPLPDAVMRAAVDAARHLARPGDA 463
126435847 387 VLIGRDRAVVAEALSRHAPDVPVVELVTGEDSGVHGTTESAVNHVTRVIDtg---grPLPDAVMRAAVDAARHLARPGDA 463
119869352 387 VLIGRDRAVVAEALSRHAPDVPVVELVTGEDSGVHGTTESAVNHVTRVIDtg---grPLPDAVMRAAVDAARHLARPGDA 463
221229909 383 VLIGRDRAMVAEALSRHAPNVPVVQVVAGEDAGMHAVAVVSGTDVISISDvg----gTIGTRVMVAAVAAARDLAQPGDT 458
118470144 382 VLIGRDRQMVADALSRHAPDVPVVELVAGEDSGVLGTNESIESVGDHVTRvievggrPVSDAVMSAVVSAARDLASPGDT 461
145223573 379 VLIGRDRAVVAEALARHAPDVPVVELVTGEDSGVLEKDESGVTRVTRVVQad---seSLSDAVMAAAVRAARGLAAPGDA 455
169629091 383 VLIGRDRALIAEALARHAPDVPVVAVVTREDAGVQE------ANVVYVTDeadgggaDLGTRVMAAAVRHASSLARPGDT 456
120404497 375 VLIGRDRAIVGNALSRHAPDVPVVELVTGEDSVVLEKDESGVTRVTRVIQtg---drTLADAVMTAAVDAARGLATSGDT 451
226360232 387 VLLGRDARQIAESLARHAPEVPVVTVETGDDAGVSAVPQTATHRVVLAAD-------TDSDAVMGVVVREAAALASAGDA 459
226307041 463 VVLAPAAASLDMFASYGHRGDSFTAAVAALpdpftdspgqagnLL 507
108800224 464 VLLAPAGASFDQFSGYTQRGDAFAAAVRAD-------------LG 495
126435847 464 VLLAPAGASFDQFSGYTQRGDAFAAAVRAD-------------LG 495
119869352 464 VLLAPAGASFDQFSGYTQRGDAFAAAVRAD-------------LG 495
221229909 459 VLLAPAGASFDQFSGYADRGDTFATAVRAA-------------IR 490
118470144 462 VLLAPAGASFDQFSGYGQRGDAFAAAVRAA-------------VG 493
145223573 456 ILLAPAGASFDQFTSYGHRGDTFAAAVRAA-------------LR 487
169629091 457 VLLAPAGASFDQFSGYSERGDRFAAAVHAL-------------TG 488
120404497 452 VLLAPAGASFDQFTGYGHRGDAFAAAVRAA-------------IR 483
226360232 460 VVLAPAAASLDMFDSYGHRGRSFAVAVGRLdesd-----isrtLR 499
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