Conserved Protein Domain Family
KOG1054

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KOG1054: KOG1054 
KOG1054, Glutamate-gated AMPA-type ion channel receptor subunit GluR2 and related subunits [Inorganic ion transport and metabolism, Amino acid transport and metabolism, Signal transduction mechanisms]
Statistics
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PSSM-Id: 229000
Aligned: 7 rows
Threshold Bit Score: -1
Created: 20-Jun-2003
Updated: 16-Jan-2013
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
25295807   2 KMCCPPIQVSLPVYGWGTLIGHfclrlfFSYTIQMlRESFGNNEEVSRVALKAMEYTSDHINSRDDVPFKLAFDHRVVEE 81   Caenorhabditis ele...
7494809      --------------------------------------------------------------------------------      Caenorhabditis ele...
1169959    1 ---MQHIFAFFCTGFLGAVVGAn-----FPNNIQI-GGLFPNQQSQEHAAFRFALSQLTE-----P--PKLLPQIDIVNI 64   human
1346142    1 MRIISRQIVLLFSGFWGLAMGA------FPSSVQI-GGLFIRNTDQEYTAFRLAIFLHNTAPNASEAPFNLVPHVDNIET 73   human
1169961    8 GQSVLRAVFFLVLGLLGHSHGG------FPNTISI-GGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDS 80   human
1169961    8 GQSVLRAVFFLVLGLLGHSHGG------FPNTISI-GGLFMRNTVQEHSAFRFAVQLYNTNQNTTEKPFHLNYHVDHLDS 80   human
23831146   1 MQKIMHISVLLSPVLWGLIFGV------SSNSIQI-GGLFPRGADQEYSAFRVGMVQFST--S--E--FRLTPHIDNLEV 67   human
25295807  82 gaAVSWNMVNAVCDELKEGAMALLSSVDGKGREGIRGVSDALEMPLVSLTAlsnddhqQQQFGNLFEVSVRPPISELLAD 161  Caenorhabditis ele...
7494809      --------------------------------------------------------------------------------      Caenorhabditis ele...
1169959   65 --SDSFEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSF-------PVDTSNQFVLQLRPELQDALIS 135  human
1346142   74 --ANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLITPSF-------PTEGESQFVLQLRPSLRGALLS 144  human
1169961   81 --SNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSF-------PTDADVQFVIQMRPALKGAILS 151  human
1169961   81 --SNSFSVTNAFCSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSF-------PTDADVQFVIQMRPALKGAILS 151  human
23831146  68 --ANSFAVTNAFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSF-------PTDGTHPFVIQMRPDLKGALLS 138  human
25295807 162 FIVHKGWGEVLVLIDPVHASLHLPSLWRHLRTRtNTSVKASMFDLPADEKQfeaYLMQFNMMRNNETNRILIDCASPKRL 241  Caenorhabditis ele...
7494809    1 ------------------------------------------------------------MLTLRPVN-VIVDLEGSYRT 19   Caenorhabditis ele...
1169959  136 IIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEK-NWQVTAVNILTTTEEG----YRMLFQDLEKKKERLVVVDCESERLN 210  human
1346142  145 LLDHYEWNCFVFLYDTDRGYSILQAIMEKAGQN-GWHVSAICVENFNDVS----YRQLLEELDRRQEKKFVIDCEIERLQ 219  human
1169961  152 LLGHYKWEKFVYLYDTERGFSILQAIMEAAVQN-NWQVTARSVGNIKDVQE---FRRIIEEMDRRQEKRYLIDCEVERIN 227  human
1169961  152 LLGHYKWEKFVYLYDTERGFSILQAIMEAAVQN-NWQVTARSVGNIKDVQE---FRRIIEEMDRRQEKRYLIDCEVERIN 227  human
23831146 139 LIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEK-KWQVTAINVGNINNDKKdemYRSLFQDLELKKERRVILDCERDKVN 217  human
25295807 242 KKLLINIRSAQFNqANYHYVLANYDFLPYDQEMFQNGNINISGFNIINKDG---REYWSLKKHLKTSSSLGGG--DDVSV 316  Caenorhabditis ele...
7494809   20 RAFLRALEESVLVkKEYHYVFSNFDVDETDLSGFHFSLINITIFRIFDKNN---KKFLKTRAEFHDVYRGGFSntDSIPT 96   Caenorhabditis ele...
1169959  211 AILGQIIKLEKNG-IGYHYILANLGFMDIDLNKFKESGANVTGFQLVNYTDtipAKIMQQWKNSDARDHTRVDw-KRPKY 288  human
1346142  220 NILEQIVSVGKHV-KGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTpmvTKLMDRWKKLDQREYPGSE--TPPKY 296  human
1169961  228 TILEQVVILGKHS-RGYHYMLANLGFTDILLERVMHGGANITGFQIVNNENpmvQQFIQRWVRLDEREFPEAKn-APLKY 305  human
1169961  228 TILEQVVILGKHS-RGYHYMLANLGFTDILLERVMHGGANITGFQIVNNENpmvQQFIQRWVRLDEREFPEAKn-APLKY 305  human
23831146 218 DIVDQVITIGKHV-KGYHYIIANLGFTDGDLLKIQFGGANVSGFQIVDYDDslvSKFIERWSTLEEKEYPGAHt-TTIKY 295  human
25295807 317 EAAVGHDAMLVTWHGFAKCLQANds-lfHGTFRhrrffnRGFPGiycdplsDRSHPNrpFSSFEHGKTIGVAFRNMKIgh 395  Caenorhabditis ele...
7494809   97 AAAFAHDAILVAGKALQIAMNEHgkgifDKSFVrhqlfnRGRKGlycrpheDQTE-SrqFETFEHGKKIAEAIKKVVLtd 175  Caenorhabditis ele...
1169959  289 TSALTYDGVKVMAEAFQSLRRQR-----IDISR------RGnAG-------DCLANP--AVPWGQGIDIQRALQQVRF-- 346  human
1346142  297 TSALTYDGVLVMAETFRSLRRQK-----IDISR------RGkSG-------DCLANP--AAPWGQGIDMERTLKQVRI-- 354  human
1169961  306 TSALTHDAILVIAEAFRYLRRQR-----VDVSR------RGsAG-------DCLANP--AVPWSQGIDIERALKMVQV-- 363  human
1169961  306 TSALTHDAILVIAEAFRYLRRQR-----VDVSR------RGsAG-------DCLANP--AVPWSQGIDIERALKMVQV-- 363  human
23831146 296 TSALTYDAVQVMTEAFRNLRKQR-----IEISR------RGnAG-------DCLANP--AVPWGQGVEIERALKQVQV-- 353  human
25295807 396 kEGtLTGNIEFDRF-GNRKNFDVSIVDLVSNTkatfnSKEVLAWRQGVGFFSNRTVAqHSRKSQNDHKDNQVIVLTNLVA 474  Caenorhabditis ele...
7494809  176 kDGtLTGRIQFDKVtGKRTNFSAEIVEIKPGVnslnsIWERFQWAEGEGFLLG-----GERYVQEKKKDSSQTRKGILPS 250  Caenorhabditis ele...
1169959  347 -EG-LTGNVQFNEK-GRRTNYTLHVIEMKHDS-----IRKIGYWNEDDKFVPAATDA-QAGGDNSSVQNRTYIVTTILED 417  human
1346142  355 -QG-LTGNVQFDHY-GRRVNYTMDVFELKSTG-----PRKVGYWNDMDKLVLIQDVP-TLGNDTAAIENRTVVVTTIMES 425  human
1169961  364 -QG-MTGNIQFDTY-GRRTNYTIDVYEMKVSG-----SRKAGYWNEYERFVPFSDQ--QISNDSASSENRTIVVTTILES 433  human
1169961  364 -QG-MTGNIQFDTY-GRRTNYTIDVYEMKVSG-----SRKAGYWNEYERFVPFSDQ--QISNDSASSENRTIVVTTILES 433  human
23831146 354 -EG-LSGNIKFDQN-GKRINYTINIMELKTNG-----PRKIGYWSEVDKMVVTLTEL-PSGNDTSGLENKTVVVTTILES 424  human
25295807 475 PFVMIKREclemanLTECQGNNKFEGFCIDLLKLLADKIEEfNYEIKLGTkasEKIlrivfyklfqAGSKQADGS-WDGM 553  Caenorhabditis ele...
7494809  251 KPWQLRfnv---vtVL--VKP--FEGYCIDLLNLLAKNITGfEYDVFIs----DGNk---------YGSRQADGS-WDGM 309  Caenorhabditis ele...
1169959  418 PYVMLKKN------ANQFEGNDRYEGYCVELAAEIAKHVGY-SYRLEIVS---DGK----------YGARDPDTKaWNGM 477  human
1346142  426 PYVMYKKN------HEMFEGNDKYEGYCVDLASEIAKHIGI-KYKIAIVP---DGK----------YGARDADTKiWNGM 485  human
1169961  434 PYVMYKKN------HEQLEGNERYEGYCVDLAYEIAKHVRI-KYKLSIVG---DGK----------YGARDPETKiWNGM 493  human
1169961  434 PYVMYKKN------HEQLEGNERYEGYCVDLAYEIAKHVRI-KYKLSIVG---DGK----------YGARDPETKiWNGM 493  human
23831146 425 PYVMMKKN------HEMLEGNERYEGYCVDLAAEIAKHCGF-KYKLTIVG---DGK----------YGARDADTKiWNGM 484  human
25295807 554 IGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLV 633  Caenorhabditis ele...
7494809  310 IGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLV 389  Caenorhabditis ele...
1169959  478 VGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLV 557  human
1346142  486 VGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLV 565  human
1169961  494 VGELVYGRADIAVAPLTITLVREEVIDFSKPLMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLV 573  human
1169961  494 VGELVYGRADIAVAPLTITLVREEVIDFSKPLMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLV 573  human
23831146 485 VGELVYGKADIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLV 564  human
25295807 634 SRFSPYEWRVEETs---RGGFT----ISNDFSVYNCLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANL 706  Caenorhabditis ele...
7494809  390 SWFSPYEKRIEFK----RGEFT----VTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANL 461  Caenorhabditis ele...
1169959  558 SRFSPYEWHSEef---eEGRDQttsdQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANL 634  human
1346142  566 SRFSPYEWHTEep---eDGKEGpsdqPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANL 642  human
1169961  574 SRFSPYEWHLEDNneepRDPQSpp-dPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANL 652  human
1169961  574 SRFSPYEWHLEDNneepRDPQSpp-dPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANL 652  human
23831146 565 SRFSPYEWHTEef---eDGRETqsseSTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANL 641  human
25295807 707 AAFLTLEKMQAPIESVEDLAKQSKIKYGIQGGGSTASFFKYSSVQIYQRMWRYMESq----VPP------------VFVA 770  Caenorhabditis ele...
7494809  462 AAFLTLERMTPPIESVEDLANQNKILYGVNEGGSTAAFFEDSIVPLYKKMWNFMVSttqkqIELekqsitnstsnrIFVS 541  Caenorhabditis ele...
1169959  635 AAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKS-----AEPs-----------VFVR 698  human
1346142  643 AAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRS-----AEPs-----------VFTR 706  human
1169961  653 AAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKS-----AEPs-----------VFTK 716  human
1169961  653 AAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKS-----AEPs-----------VFTK 716  human
23831146 642 AAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRS-----AEPs-----------VFVR 705  human
25295807 771 SYAEGIERVRSHKGRYAFLLEATANEYENTRKPCDTMKVGANLNSIGYGIATPFGS---------DWKDHINLAILALQE 841  Caenorhabditis ele...
7494809  542 SYADGIEKVRTSKGKYAFLLEETTNNYESGRRPCDTMKVGQNLNTLGYGIATKIGNplryvknsvSLRVSLNLAILYLSE 621  Caenorhabditis ele...
1169959  699 TTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS---------ALRNPVNLAVLKLNE 769  human
1346142  707 TTAEGVARVRKSKGKFAFLLESTMNDNIEQRKPCDTMKVGGNLDSKGYGVATPKGS---------SLRTPVNLAVLKLSE 777  human
1169961  717 TTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGS---------ALGNAVNLAVLKLNE 787  human
1169961  717 TTADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGS---------ALGNAVNLAVLKLNE 787  human
23831146 706 TTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGS---------SLRNAVNLAVLKLNE 776  human
25295807 842 RGELKKLENKWWYDRGQCDAGITVDGSS-ASLNLSKVAGIFYILMGGMVISMLAALGEFLYRSRIEARKSN------SNS 914  Caenorhabditis ele...
7494809  622 KGELKKLENKWWYDRGQCDTGTSDGGTS-SSLNLSKVAGIFYILLAGMVLSMCTALVEFLFRKNKENREKE------RNR 694  Caenorhabditis ele...
1169959  770 QGLLDKLKNKWWYDKGECGSGGGDSKDKtSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMKgfclipQQS 849  human
1346142  778 AGVLDKLKNKWWYDKGECGPKDSGSKDKtSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMK--------- 848  human
1169961  788 QGLLDKLKNKWWYDKGECGSGGGDSKDKtSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMK--------- 858  human
1169961  788 QGLLDKLKNKWWYDKGECGSGGGDSKDKtSALSLSNVAGVFYILVGGLGLAMMVALIEFCYKSRAESKRMK--------- 858  human
23831146 777 QGLLDKLKNKWWYDKGECGSGGGDSKEKtSALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRAEAKRMK--------- 847  human
25295807 915 MVAnFAKNLKSALssqlrlsveGGAVAQPgsqSHNAIRRqqvaaflPANEKEAFNNVDRPANTLY 979  Caenorhabditis elegans
7494809  695 MRS--SRPLK------------PGILAS----CERAKQKq------LQNRRTKSEEVSTPRSTLF 735  Caenorhabditis elegans
1169959  850 INEaIRTSTLPRN---------SGAGASSggsGENGRVVsh---dfPKSMQSIPCMSHSSGMPLG 902  human
1346142  849 ----LTFSEAIRN---------KARLSITgsvGENGRVLtp---dcPKAVHTGTAIRQSSGLAVI 897  human
1169961  859 ----LTKNTQNFK---------PAPATNT----QN-----------YATYREGYNVYGTESVKI- 894  human
1169961  859 ----LTKNTQNFK---------PAPATNT----QN-----------YATYREGYNVYGTESVKI- 894  human
23831146 848 ----VAKNAQNIN---------PSSSQNS----QN-----------FATYKEGYNVYGIESVKI- 883  human
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