Conserved Protein Domain Family
KOG0133

?
KOG0133: KOG0133 
KOG0133, Deoxyribodipyrimidine photolyase/cryptochrome [Replication, recombination and repair, Signal transduction mechanisms]
Statistics
?
PSSM-Id: 228083
Aligned: 12 rows
Threshold Bit Score: -1
Created: 20-Jun-2003
Updated: 16-Jan-2013
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
25407462   8 CGSGGCSIVWFRRDLRVEDNPAL-------AAAVRAG---PVIALFVWAPEEEGH---------YHPGRVSRWWLKNSLA 68  thale cress
7298691    2 DSQRSTLVHWFRKGLRLHDNPALshiftaaNAAPGKY---FVRPIFILDPGILDW---------MQVGANRWRFLQQTLE 69  fruit fly
7300494    1 MATRGANVIWFRHGLRLHDNPALl------AALADKDqgiALIPVFIFDGESAGT---------KNVGYNRMRFLLDSLQ 65  fruit fly
7304148    8 WRESFKIVLPLQAMKRTKAQKAGpskkaakNEKASSE---PKSDQESSDEEASTSk-------aLLVSKPDYQNFEQFLT 77  fruit fly
3913379    1 MKMDKKTIVWFRRDLRIEDNPAL-------AAAAHEG---SVFPVFIWCPEEEGQ---------FYPGRASRWWMKQSLA 61  thale cress
30682738     --------------------------------------------------------------------------------     thale cress
15226633   1 ---------------------------------------------------------------------MDSSNVEENLN 11  thale cress
18400841  20 MATGSGSLIWFRKGLRVHDNPALe------YASKGSE---FMYPVFVIDPHYMESdpsafspgsSRAGVNRIRFLLESLK 90  thale cress
15235011     --------------------------------------------------------------------------------     thale cress
29789122  18 GTDSASSVHWFRKGLRLHDNPALl------AAVRGAR---CVRCVYILDPWFAAS---------SSVGINRWRFLLQSLE 79  human
4758072    1 --MGVNAVHWFRKGLRLHDNPALk------ECIQGAD---TIRCVYILDPWFAGS---------SNVGINRWRFLLQCLE 60  human
130158    71 FENVSTVMHWFRNDLRLYDNVGLyksvalfQQLRQKNakaKLYAVYVINEDDWRA---------HMDSGWKLMFIMGALK 141 baker's yeast
25407462  69 QLDSS---LRSLGTCLITKRSTdSVASLLDVVKSTGASQIF-FNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEP 144 thale cress
7298691   70 DLDNQ---LRKLNSRLFVVRGK-PAEVFPRIFKSWRVEMLT-FETDIEPYSVTRDAAVQKLAKAEGVRVETHCSHTIYNP 144 fruit fly
7300494   66 DIDDQlqaATDGRGRLLVFEGE-PAYIFRRLHEQVRLHRIC-IEQDCEPIWNERDESIRSLCRELNIDFVEKVSHTLWDP 143 fruit fly
7304148   78 HLEHQr-vCTAANIQEFSFRKK-RVRVLSK-TEDVKESSLGgVVYWMSRDGRVQDNWALLFAQRLALKLELPLTVVFCLV 154 fruit fly
3913379   62 HLSQS---LKALGSDLTLIKTHnTISAILDCIRVTGATKVV-FNHLYDPVSLVRDHTVKEKLVERGISVQSYNGDLLYEP 137 thale cress
30682738   1 ------------MASTVSVQPG-RIRILKKGSWQPLDQTVGpVVYWMFRDQRLKDNWALIHAVDLANRTNAPVAVVFNLF 67  thale cress
15226633  12 PETKS----AEEQNPLAIFHSSlPIASLSLTLFPSSTQFLK---LFAHHPNKVKIPTQASSLTHLSLSSVSPFPSSRISF 84  thale cress
18400841  91 DLDSS---LKKLGSRLLVFKGE-PGEVLVRCLQEWKVKRLC-FEYDTDPYYQALDVKVKDYASSTGVEVFSPVSHTLFNP 165 thale cress
15235011   1 ------------------------------------------------------------------MAFLALPHFLHLRL 14  thale cress
29789122  80 DLDTS---LRKLNSRLFVVRGQ-PADVFPRLFKEWGVTRLT-FEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDL 154 human
4758072   61 DLDAN---LRKLNSRLFVIRGQ-PADVFPRLFKEWNITKLS-IEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDL 135 human
130158   142 NLQQS---LAELHIPLLLWEFHtPKSTLSNSKEFVEFFKEK-CMNVSSGTGTIITANIEYQTDELYRDIRLLENEDHRLQ 217 baker's yeast
25407462 145 WEVTDE-LGRPFSMFAAFWERCLSMPYD--------PESPLLPPKKIISGDVSKCVADPLVFEDDSEKGSNALLARa--W 213 thale cress
7298691  145 ELVIAKnLGKAPITYQKFLGIVEQLKVPkvlg-vpeKLKNMPTPPKDEVEQKDSAAYDCPTMKQLVKRPEELGPNK---F 220 fruit fly
7300494  144 QLVIETnGGIPPLTYQMFLHTVQIIGLPprptadarLEDATFVELDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAkinW 223 fruit fly
7304148  155 PKFLNAtIRHYKFMMGGLQEVEQQCRALdip---fhLLMGSAVEKLPQFVKSKDIGAVVCDFAPLRLPRQWVEDVG---K 228 fruit fly
3913379  138 WEIYCE-KGKPFTSFNSYWKKCLDMSIEsv----mlPPPWRLMPITAAAEAIWACSIEELGLENEAEKPSNALLTRa--W 210 thale cress
30682738  68 DQFLDAkARQLGFMLKGLRQLHHQIDSLqip---ffLLQGDAKETIPNFLTECGASHLVTDFSPLREIRRCKDEVV---K 141 thale cress
15226633  85 KSTIAAnPLQSPLSIVPRRPVDPSSAAAlrr--aavVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSS---- 158 thale cress
18400841 166 AHIIEKnGGKPPLSYQSFLKVAGEPSCAks----elVMSYSSLPPIGDIG--NLGISEVPSLEELGYKDDEQADWTp--F 237 thale cress
15235011  15 RRNDRKnRCKCCLSSATNEGSTAVVWFK----------HDLRVDDHPGLLAASKHRAVIPLYVLDRRILSRYTTDT---- 80  thale cress
29789122 155 DRIIELnGQKPPLTYKRFQAIISRMELPkkp--vglVTSQQMESCRAEIQENHDETYGVPSLEELGFPTEGLGPAV---W 229 human
4758072  136 DKIIELnGGQPPLTYKRFQTLISKMEPLeip--vetITSEVIEKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAV---W 210 human
130158   218 LKYYHDsCIVAPGLITTDRGTNYSVFTPwykkwvlyVNNYKKSTSEICHLHIIEPLKYNETFELKPFQYSLPDEFLqyiP 297 baker's yeast
25407462 214 SPGWSNGDKALTTFINGP--LLEYSKNRRKADSAT---TS--FLSPHLHFGEVSVRKVFH----LVRIKQVAWANEGNEA 282 thale cress
7298691  221 PGGETEALRRMEESLKDE--IWVARFEKPNTAPNSl-ePSttVLSPYLKFGCLSARLFN------QKLKEIIKRQPKHSQ 291 fruit fly
7300494  224 RGGETQALLLLDERLKVEqhAFERGFYLPNQALPNi-hDSpkSMSAHLRFGCLSVRRFYWs--vHDLFKNVQLRACVRGV 300 fruit fly
7304148  229 ALPKSVPLVQVDAHNVVP--LWVASDKQEYAARTIrnkINs-KLGEYLSVFPPVVRHPHGt--gCKNVNTVDWSAAYASL 303 fruit fly
3913379  211 SPGWSNADKLLNEFIEKQ--LIDYAKNSKKVVGNS---TS--LLSPYLHFGEISVRHVFQ----CARMKQIIWARDKNSE 279 thale cress
30682738 142 RTSDSLAIHEVDAHNVVP--MWAASSKLEYSARTIrgkINk-LLPDYLIEFP-KLEPPKKkwtgMMDKKLVDWDSLIDKV 217 thale cress
15226633 159 -SGFDKTGPFRAQFLIESvsELRKNLQARGSNLVVrvgKPeaVLVELAKEIGADAVYAHR----EVSHDEVKAEGKIETA 233 thale cress
18400841 238 RGGESEALKRLTKSISDK--AWVANFEKPKGDPSAflkPAttVMSPYLKFGCLSSRYFY------QCLQNIYKDVKKHTS 309 thale cress
15235011  81 LELAIIALEDLRKTLKKQ----GSNLMLRYGNAENvieDLvkEVRAPFVFVEEEVEYHLC-----EVLDAVKNKLEGVSL 151 thale cress
29789122 230 QGGETEALARLDKHLERK--AWVANYERPRMNANSl-lASptGLSPYLRFGCLSCRLFY------YRLWDLYKKVKRNST 300 human
4758072  211 PGGETEALTRLERHLERK--AWVANFERPRMNANSl-lASptGLSPYLRFGCLSCRLFY------FKLTDLYKKVKKNSS 281 human
130158   298 KSKWCLPDVSEEAALSRLkdFLGTKSSKYNNEKDMlylGGtsGLSVYITTGRISTRLIVNqa-fQSCNGQIMSKALKDNS 376 baker's yeast
25407462 283 GEESvnLFLKSIGLREYSRYISFNHPY-SHERPLLGHLKFFPWAV-DENYFKAWRQGRTG-YPLVDAGMRELWATGWLHD 359 thale cress
7298691  292 PPVS---LIGQLMWREFYYTVAAAEPN-FDRMLGNVYCMQIPWQE-HPDHLEAWTHGRTG-YPFIDAIMRQLRQEGWIHH 365 fruit fly
7300494  301 QMTGgaHITGQLIWREYFYTMSVNNPN-YDRMEGNDICLSIPWAKpNENLLQSWRLGQTG-FPLIDGAMRQLLAEGWLHH 378 fruit fly
7304148  304 QCD---MEVDEVQWAKPGYKAACQQLY----EFCSRRLRHFNDKR-NDPT-ADALSGLS---PWLHFGHISAQRCALEVQ 371 fruit fly
3913379  280 GEESadLFLRGIGLREYSRYICFNFPF-THEQSLLSHLRFFPWDA-DVDKFKAWRQGRTG-YPLVDAGMRELWATGWMHN 356 thale cress
30682738 218 VREG--AEVPEIEWCVPGEDAGIEVLMgNKDGFLTKRLKNYSTDR-NNPIKPKALSGLS---PYLHFGQVSAQRCALEAR 291 thale cress
15226633 234 MKEE--GVEVKYFWGSTLYHLDDLPFK-IEDLPSNYGAFKDKVQKlEIRKTIAALDQLKS-LPSRGDVELGDIPSLLDLG 309 thale cress
18400841 310 PPVS---LLGQLLWREFFYTTAFGTPN-FDKMKGNRICKQIPWNE-DHAMLAAWRDGKTG-YPWIDAIMVQLLKWGWMHH 383 thale cress
15235011 152 SGES----PRIVAWRTPFYESQNLTDLpQSWEEFKKLKLPLTLPVpAAKFSSPGSELQWGsVPTLDDLKDYLKESLWEIE 227 thale cress
29789122 301 PPLS---LFGQLLWREFFYTAATNNPR-FDRMEGNPICIQIPWDR-NPEALAKWAEGKTG-FPWIDAIMTQLRQEGWIHH 374 human
4758072  282 PPLS---LYGQLLWREFFYTAATNNPR-FDKMEGNPICVQIPWDK-NPEALAKWAEGRTG-FPWIDAIMTQLRQEGWIHH 355 human
130158   377 STQN---FIKEVAWRDFYRHCMCNWPYtSMGMPYRLDTLDIKWEN-NPVAFEKWCTGNTG-IPIVDAIMRKLLYTGYINN 451 baker's yeast
25407462 360 RIR-VVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDSREFDR--IDNPQFEGYKFDPNGEYVRR 435 thale cress
7298691  366 LAR-HAVACFLTRgDLWISWEEGQRVFEQLLLDQDWALNAGNWMWLS-ASAFFHQYFR--VYSPVAFGKKTDPQGHYIRK 441 fruit fly
7300494  379 TLR-NTVATFLTRgGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVS-SSAFERLLDSslVTCPVALAKRLDPDGTYIKQ 456 fruit fly
7304148  372 RFRgQHKASADAFcEEAIVRRELADNFCFYNEHYDSLKGLSSWAYQTLDAHRKDKRDP--CYSLEELEKSLTYDDLWNSA 449 fruit fly
3913379  357 RIR-VIVSSFAVK-FLLLPWKWGMKYFWDTLLDADLECDILGWQYISGSIPDGHELDR--LDNPALQGAKYDPEGEYIRQ 432 thale cress
30682738 292 KVRsTSPQAVDTFlEELIVRRELSDNFCYYQPHYDSLKGAWEWARKSLMDHASDKREH--IYSLEQLEKGLTADPLWNAS 369 thale cress
15226633 310 ISP-TPRTSQEGKpTMVGGETEALTRLKSFAADCQARLSKGNQKGGN-NSVFGANFSC--KISPWLAMGSISPRSMFDEL 385 thale cress
18400841 384 LAR-HCVACFLTRgDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLS-CSSFFYQFNR--IYSPISFGKKYDPDGKYIRH 459 thale cress
15235011 228 NSWrEMAQASAER-VLMERLGNLKESSMEPIVDGSLGKKVDNSVFVTSKRDTVGGGNE---VVLNALAGYLRRSVHYEAI 303 thale cress
29789122 375 LAR-HAVACFLTRgDLWVSWESGVRVFDELLLDADFSVNAGSWMWLS-CSAFFQQFFH--CYCPVGFGRRTDPSGDYIRR 450 human
4758072  356 LAR-HAVACFLTRgDLWISWEEGMKVFEELLLDADWSINAGSWMWLS-CSSFFQQFFH--CYCPVGFGRRTDPNGDYIRR 431 human
130158   452 RSR-MITASFLSK-NLLIDWRWGERWFMKHLIDGDSSSNVGGWGFCSSTGIDAQPYFR--VFNMDIQAKKYDPQMIFVKQ 527 baker's yeast
25407462 436 WLPELSRLPTD-WIHHPWNAPESVLQAAGIELGSNYPLPIVGLDEAKARLHEALSQMWQLEAASRaaiengseeglgdsa 514 thale cress
7298691  442 YVPELSKYPAG-CIYEPWKASLVDQRAYGCVLGTDYPHRIVKHEVVHKENIKRMGAAYKVNREVR--------------- 505 fruit fly
7300494  457 YVPELMNVPKE-FVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKSLRNSLITPPp-------------- 521 fruit fly
7304148  450 QLQLVREGKMHgFLRMYWAKKILEWTATPEHALEYAILLNDKYSLDGRDPNGYVGCMWSIGGVHD--------------- 514 fruit fly
3913379  433 WLPELARLPTE-WIHHPWDAPLTVLKASGVELGTNYAKPIVDIDTARELLAKAISRTREAQIMIGaapdeiva------- 504 thale cress
30682738 370 QLEMVYQGKMHgFMRMYWAKKILEWTKGPEEALSISIYLNNKYEIDGRDPSGYVGCMWSICGVHD--------------- 434 thale cress
15226633 386 KKTISASTTST--TPRNGPGDTGLNWLMYELLWRDFFRFITKKYSSAKTQVEAGPATACTGAFA---------------- 447 thale cress
18400841 460 FLPVLKDMPKQ-YIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYALNKKMD--------------- 523 thale cress
15235011 304 EYEKERNAGFI--------SPFG------------YSAATVSAATDAVCSMEYTvvgnegpavllvhgfgaflehyrdnv 363 thale cress
29789122 451 YLPKLKAFPSR-YIYEPWNAPESIQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLSRYRglcllasv------- 522 human
4758072  432 YLPVLRGFPAK-YIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRglgllasvp------ 504 human
130158   528 WVPELISSENK--------RPE------------NYPKPLVDLKHSRERALKVYKDAM---------------------- 565 baker's yeast
25407462 515 eveeapiefprDITMEEteptrlnPNRRYEDQMVPSIT----SSLIRPEED 561 thale cress
7298691  506 -----------TGKEEE-------SSFEEKSETSTSGKrkvrRATGSAPKR 538 fruit fly
7300494  522 ----------hCRPSNE-------EEVRQFFWLADVVV------------- 542 fruit fly
7304148  515 -----------MGWKER-------AIFGKVRYMNYQGCr---RKFDVNAFV 544 fruit fly
3913379  505 ----dsfealgaNTIKEpg---lcPSVSSNDQQVPSAVryngSKRVKPEEE 548 thale cress
30682738 435 -----------QGWKER-------PVFGKIRYMNYAGCk---RKFNVDSYI 464 thale cress
15226633     ---------------------------------------------------     thale cress
18400841 524 ------------GKVDE-------ENLRDLRRKLQKDEheesKIRNQRPKL 555 thale cress
15235011 364 dnivnsknrvwtitvlgfgksekpniiytellwaellrdfmaevvgepahc 414 thale cress
29789122 523 ----pscvedlSHPVAEp------SSSQAGSMSS-AGPrplpSGPASPKRK 562 human
4758072  505 --snpngnggfMGYSAEni----pGCSSSGSCSQGSGIlhyaHGDSQQTHL 549 human
130158       ---------------------------------------------------     baker's yeast
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap