1IRY


Conserved Protein Domain Family
MTH1

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cd03427: MTH1 (this model, PSSM-Id:72885 is obsolete and has been replaced by 467533)
Click on image for an interactive view with Cn3D
MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily. MTH1, the mammalian counterpart of MutT, hydrolyzes oxidized purine nucleoside triphosphates, such as 8-oxo-dGTP and 2-hydroxy-ATP, to monophosphates, thereby preventing the incorporation of such oxygen radicals during replication. This is an important step in the repair mechanism in genomic and mitochondrial DNA. Like other members of the Nudix family, it requires a divalent cation, such as Mg2+ or Mn2+, for activity, and contain the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as a metal binding and catalytic site. MTH1 is predominantly localized in the cytoplasm and mitochondria. Structurally, this enzyme adopts a similar fold to MutT despite low sequence similarity outside the conserved nudix motif. The most distinctive structural difference between MutT and MTH1 is the presence of a beta-hairpin, which is absent in MutT. This results in a much deeper and narrower substrate binding pocket. Mechanistically, MTH1 contains dual specificity for nucleotides that contain 2-OH-adenine bases and those that contain 8-oxo-guanine bases.
Statistics
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PSSM-Id: 72885
Aligned: 47 rows
Threshold Bit Score: -1
Created: 12-Sep-2005
Updated: 9-Mar-2011
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:nucleotide binding site [chemical binding site]
Evidence:
  • Comment:determined by chemical perturbation experiments

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1       # # #                         #    #            ##  ##                   #      
1IRY_A        5 RLYTLVLVLQp--qRVLLGMKKrgfgaGRWNGFGGKVQEGETIEDGARRELQEES--GLTVDALHKV--GQIVFEFvge- 77  Homo sapiens
CAC96446      2 YKYTLCFIQRa--dEILLLNRQkspwmGSWNGVGGKIEPGESLIESIKREIKEET--GINAADYEIRdiGEMKWFVeg-- 75  Listeria innocua
AAP10005      2 YKYTICFIRKs--dKILLLNRNkkpnmGMWNGVGGKIEENETPYEGIIRETFEET--GIELSSVTYK--GTVVFKGkde- 74  Bacillus cereus ...
AAT31801      2 YKHTLCFIKRn--eEILMLNRKydpvkGLWNGVGGKIEKGETPLENAIREIKEETniKVTHDQIQFK--GIIKWEDss-- 75  Bacillus anthrac...
CAG87374      6 YKYTWGIVYCretnQILLLNREkhpwmGRWNGVGGKLDQDEDQLTCIIRETWEET--GLHLPQYEPR--GVMTWSEng-- 79  Debaryomyces han...
ZP_00386142   3 KKYTLVTVETp--sGWLLINRTnppyrGMWNTLGGKFLPNENPATCVSRELQEES--HIIIPPHDLIngGRVFWHVdg-- 76  Lactobacillus ca...
ZP_00537879   2 YRYTLCLIRKh--dQWLLLNRQkqpamGMWNGVGGKIEPGESPAESVIRETFEET--GLTLTAVQFS--GTILLQAd--- 72  Exiguobacterium ...
XP_713698    16 LLYTLGFIRCkdnnKILLLNRNkspwmGLYNGVGGKLQSGETALDCMIREANEET--GLHLTNFISR--GIMTWKIdysd 91  Candida albicans...
YP_396274     4 RRYNLAVIRYr--gTLLLLNRLkkpyaGLWNGIGGKNEGDETAEMGMRREIFEET--GLNQNQYTLYntGWLDWHIdg-- 77  Lactobacillus sa...
ZP_01181786   2 FKHTTCLIKNn--dRFLLLNRNkqpsmGVWNGVGGKIEENETPEECVIRETYEET--GIHLENVTYV--GNVVLESey-- 73  Bacillus cereus ...
Feature 1                 # #                                        # #                        
1IRY_A       78 -------peLMDVHVFCTDSIQGtpv-------esDEMRPCWFQldqipFKDMWPDDSYWFPLLl-----QKKKFHGYFK 138 Homo sapiens
CAC96446     76 -------enLGGMHLFVAKLKDDfiyqt---platDEGILDFKKis-wiLNQENTGVVNNLPYLikhvpdDLKRIEVTTK 144 Listeria innocua
AAP10005     75 ------pqaSEGMYVFVADFPDGmqmnt---plrtAEGLLEWKEid-wiLDGDNRGVVSNLPKYlptvitEENKLKHIFT 144 Bacillus cereus ...
AAT31801     76 --------ySGGMYVYLVELLHEftyht---pkkvSEGILDWKEis-wiLSDYNYGVGEMIPKFlvevlhNELILEHNFV 143 Bacillus anthrac...
CAG87374     80 -------ndLGGMYLFTAIVTKQevesyptpkkfcHEGILDWKNld-wvMHPDNSGVVDNVKVMllnlfkASERSLFVTE 151 Debaryomyces han...
ZP_00386142  77 -------elRAELFAFFGHTEDElvmp-----ratREGILATFSkd--wLLADNPGLVPDLQPLlhf-alNGERHDYASY 141 Lactobacillus ca...
ZP_00537879  73 --------eTVGIYLFLAELPSDqllvt---platREGILDWKQld-wiLHPDNTGVISNLKTYlphvlkQTTPQLHTFH 140 Exiguobacterium ...
XP_713698    92 nvtshqqpsIGGLYLFTADISIEqyeqyrtplvynDEGILDWKNmd-wiLHQNNFGVVDNIKIIlqylfdSKEQDLFTVK 170 Candida albicans...
YP_396274    78 -------efIAGIDVFLAEIKESvqlpl--ypvgtREGILQLFDeq-wvLSEENYGIVADLKVIlpe-vlAKNVKRYYTD 146 Lactobacillus sa...
ZP_01181786  74 --------gSSGIYVFISEISDGiqlkt---pvniEEGILDWKSie-wiLDENNQGIISHLKRYlplileGKYGLEHIFY 141 Bacillus cereus ...
Feature 1         
1IRY_A      139 FQ 140 Homo sapiens
CAC96446    145 YR 146 Listeria innocua
AAP10005    145 YD 146 Bacillus cereus ATCC 14579
AAT31801    144 LS 145 Bacillus anthracis str. 'Ames Ancestor'
CAG87374    152 YR 153 Debaryomyces hansenii CBS767
ZP_00386142 142 FT 143 Lactobacillus casei ATCC 334
ZP_00537879 141 YD 142 Exiguobacterium sibiricum 255-15
XP_713698   171 YN 172 Candida albicans SC5314
YP_396274   147 FH 148 Lactobacillus sakei subsp. sakei 23K
ZP_01181786 142 YN 143 Bacillus cereus subsp. cytotoxis NVH 391-98

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