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In Between Ring fingers; the domains occurs between pairs og RING fingers
Statistics
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PSSM-Id: 554
View PSSM: smart00647
Aligned: 65 rows
Threshold Bit Score: -1
Threshold Setting Gi: 0
Created: 12-Dec-2003
Updated: 12-Dec-2003
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

smart00647 is not assigned to any domain superfamily.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9963793   195 EKYRRYLFRDYVESH-YQLQLCPG-ADCPMVIRVQEprarrvqcnrcnevfwfqvssdvsrthrlchnpemahevskttl 272
gi 13591434   36 IKYKYFLELGRIDS---STKPCP---QCKHFTTFKKkghip--------------------------------------- 70
gi 16550293  349 ALFHKKLTEGVLMRD-PKFLWCA---QCSFGFIYE--------------------------------------------- 379
gi 3250676   271 TTFKSFEEANVCSKN-NGKIYCPY-PNCSFLLDPQEclssgra------------------------------------- 311
gi 1945502   253 AKYEAHMLEKAIREM-DDSMECPN-ENCQMVAYLT--------------------------------------------- 285
gi 16945411  437 RRYDELATRAALGNI-PNFRWCKS-SKCNSGQIDD--------------------------------------------- 469
gi 6996254   134 EMWEQRIKEESIPV--CNRFHCPN-PKCWALMSKTElt------------------------------------------ 168
gi 7630155   216 EQIHRKYLTSFVETC-PTLHWCPNpQGCAAVIYAPv-------------------------------------------- 250
gi 5262156  1628 DELISASLSAFVTSSdGKLRFCST-PDCPSIYRVAGp------------------------------------------- 1663
gi 2497083   272 ERYEKMFYNQAATR---LSKYCPY--ACVTCRRCDSwct----------------------------------------- 305
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 9963793   273 kqpttlvltlktvpsatsafekDGGCNHMQCSKCKHDFCWMCLGD---WktHGSEyyEC 328
gi 13591434   71 ------------------tpsrSESKYKIQCPTCQFVWCFKCHSP---W--HEGV--NC 104
gi 16550293  380 -----------------------REQLEATCPQCHQTFCVRCKRQweeQ--HRGR--SC 411
gi 3250676   312 ---------------ssssstqSENSCCVECPVCERFVCVDCGVP---W--HASM--SC 348
gi 1945502   286 ----------------------DSQRNLVECSYCNYSFCNLCKGT---F--HGVS--RC 315
gi 16945411  470 -----------------------VRCVRFKCKACKNSHCIKHDVP---W--HSGE--TC 498
gi 6996254   169 --------------------esTDDGVRRCCSKCRKPFCIDCNVS---W--HSNL--SC 200
gi 7630155   251 ---------------------pPLQGQGVRCLLCNRSYCLRCSYE---P--HRPA--TC 281
gi 5262156  1664 ---------------------qESGE-PFICGACHSETCTRCHLE---Y--HPLI--TC 1693
gi 2497083   306 --------------------keDLDDAMIQCQKCHFVFCFDCLHA---W--HGYNn-KC 338
Citing CDD
Marchler-Bauer A et al. (2013), "CDD: conserved domains and protein three-dimensional structure.", Nucleic Acids Res. 41(D1):D384-52.
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