Conserved Protein Domain Family
ATF7IP_BD

?
pfam16788: ATF7IP_BD (this model, PSSM-Id:407052 is obsolete and has been replaced by 465271)
ATF-interacting protein binding domain
ATF7IP-BD is a short conserved region of activating transcription factor 7-interacting protein 1 found in higher eukaryotes. This domain appears to bind several key proteins such as TFIIE-alpha and TFIIE-beta as well the transcriptional regulator Sp1 which are part of the transcriptional machinery.
Statistics
?
PSSM-Id: 407052
Aligned: 27 rows
Threshold Bit Score: 138.66
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ELV10132      511 NVHSKRRRYMEeey-eaEFQVKITAKGDINQKLQKVIQWLLEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTEL 589  Chinese tree ...
2_pfamImport    1 KRELKRPKMQNhel-eaKLELKITAKAGAHPKLEKVVQQLVEQHLRALQLNIFDQHFKELKDRIDKIDCAAKHQTAVNTL 79  
XP_014349033  524 SSEVKRRRFLGeey-eaELQVKITARGDMNKKLEKVVQRLLEEKLTALQCTEFDKSLADLRTRVEKLECKK-HEAVLSNL 601  coelacanth
XP_007503754  414 NVQSKRRRYLGeey-eaELQVKITARGDINQKLQKVVQRLLEEKLSALQCAVFDKTLADLKMRVEKIECNKRHKTVLTEL 492  gray short-ta...
XP_012424565  392 NVHSKHRRYMGedy-eaEVQVKITARKDVDLKLQKIIQRLLEEKLTALQCAVFDKTLADLKTRMEKVECNKRHKTVLTEM 470  zebra finch
XP_019469923  378 SVHSKRRRYVGeedyeaEFQVKITARRDVDQKLEKVIQRVLEEKLAALQCAVFDKTLADLKMRIEKVECNKRHKTVLTEL 457  turkey
EOB06704      392 SVHSKRRRYVGedy-eaELQVKITARRDVDQKLQKVIQRLLEEKLAALQCAVFDKTLADLKMRIEKIECNKRHKTVLTEL 470  mallard
XP_016853654  404 SVHSKRCRNTGeey-eaELEVKITTRGNVQQNIEKIIHRFLEEKFSVLQCAVFDKTLADLKTRVDKVECSKRHKTAVTEL 482  green anole
CAB45135       20 NVQSKRRRYMEeey-eaEFQVKITAKGDINQKLQKVIQWLLEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTEL 98   human
KAE8611096    528 SESSKRRRYEGeey-eaELQVKITAD-DLNKKLQNVIQKMLEERLSTLQCVVFDKTLADLKTRVEKIECKK-HENILYAI 604  tropical claw...
ELV10132      590 QAKIARLTKRFGAAKEDLKKRqen-ppnPPVSPGKSA--NEVSSNNSMPYRNAGTVRQMLESKRSVSESapp-------- 658  Chinese tree ...
2_pfamImport   80 QSKITRLAKKFGEANQELENKkkq--edlQVVAAAVTakTTTTASSPQVQRNSQCYLKILNKATvpa------------- 144 
XP_014349033  602 QAKIARLIKRFGAAREDLKKSqehnaavQPLSPVRAPnsNQ------QSYRSTNTVRHMLESKRSLDSTap--------- 666  coelacanth
XP_007503754  493 QAKIARLTKRFGAAKEDLKKRqen-ppnPPVSPGKSTanEVVSINN-LTYRNAGTVRQMLESKRNIGENtps-------- 562  gray short-ta...
XP_012424565  471 QAKIARLTKRVGAAKEDLKKRqen-vanAPVSPGKAApdTANGNNA--TYRNAGTVRQMLESKRNVGEStpa-------- 539  zebra finch
XP_019469923  458 QAKISRLTKRFGAAKEDMEEKqen-tpnPSLSSGKAAssTANANN--LTYRNITTVRQMLESKRNVGDSkpa-------- 526  turkey
EOB06704      471 QAKVARLTKRFGAAKEDLKKRqen-ppnSPLSPVKAAsdTVSTTNT--TYRNAGTVRQMLESKRSVGVSttt-------- 539  mallard
XP_016853654  483 QAKIARLTKRFGAAREDSKKKp-----eNPHSPEK-AvsDTGGINN-AQFRNAGTVRQMLESKRNVGESttt-------- 547  green anole
CAB45135       99 QAKIARLTKRFEAAKEDLKKRheh-ppnPPVSPGK-TvnDVNSNNN-MSYRNAGTVRQMLESKRNVSESapp-------- 167  human
KAE8611096    605 QAKIARLTKRFGAAKEDLKKRpeqstavNPASPGK-TvnEASTANNSMNYRSASTVRQMLESKRNVGETvtilqpsttaq 683  tropical claw...
ELV10132      659 --------------------------------------sfQTPgntEFVKCRHFVFQSGKATGNDSGGVIDLTVDEEESG 700  Chinese tree ...
2_pfamImport  145 --------------------------------------taAVP-----ALAPVSTPAPPPAPAPVPVPTSTAMVI----- 176 
XP_014349033  667 ---------------------------------------lPTS---SNSVCGSSITSSQ-AVAGQPKPPATVSSSSM-VP 702  coelacanth
XP_007503754  563 --------------------------------------pfQAP---VNAVSSASIATPQTAVSGQPKSQTPVTSGS---- 597  gray short-ta...
XP_012424565  540 --------------------------------------tfQAP---VNPVPASSLAASPAVVSGHPKLQTPVSSTS---- 574  zebra finch
XP_019469923  527 --------------------------------------tlQAP---VNPAPPSSLAAPQTPTSGHPKPQTPVTSSP---- 561  turkey
EOB06704      540 --------------------------------------tfQAS---LSTVPASTFVAPQIPGSGHPKPQTPVTSSP---- 574  mallard
XP_016853654  548 --------------------------------------tfQSP---VNTVSATTIIAPQTQSSGHTKPQTPVTSAPLTSG 586  green anole
CAB45135      168 --------------------------------------sfQTP---VNTVSSTNLVTPPAVVSSQPKLQTPVTSGSLT-- 204  human
KAE8611096    684 pstpttsslphrtpntttqvsvsqstantslqgrappdwkLIQ---QR-INASSIGTPQNSLNNQNKPLPPVTSAPV--- 756  tropical claw...
ELV10132      701 ASQGVTVRVPQTTTYVVNNGLTLGSTGPQ 729  Chinese tree shrew
2_pfamImport  177 --QAPVLQLITSTSN-AASPLPTALTSQN 202 
XP_014349033  703 PILPPVAATATATAVVGTSQPASSTTQPM 731  coelacanth
XP_007503754  598 -LTASVLPAPTTAPVVASTQVSSGNSQPt 625  gray short-tailed opossum
XP_012424565  575 SLTTAVLPTANTATVVGTNQVPTGSAPSV 603  zebra finch
XP_019469923  562 -LTTAVISTANTATVVGTSQVPSGSTQPM 589  turkey
EOB06704      575 -LTTTVLSTANTAAVVGTSQVPSGSTQQM 602  mallard
XP_016853654  587 TLTTSVIPAPNTATVVGTNQVAGGNTQSM 615  green anole
CAB45135      205 --ATSVLPAPNTATVVATTQVPSGNPQPt 231  human
KAE8611096    757 --MTSVIPATTTATVVGNSQVSGSSSQPM 783  tropical clawed frog
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap