Conserved Protein Domain Family
CCDC168_N
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pfam15804: CCDC168_N (this model, PSSM-Id:406285 is obsolete and has been replaced by 464883)
Coiled-coil domain-containing protein 168
CCDC168_N is the N-terminal region of eukaryotic coiled-coil proteins 168 family. There are up to 17, on average 6, copies of this repeat in most members.
Links
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Statistics
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PSSM-Id: 406285
Aligned: 9 rows
Threshold Bit Score: 237.082
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
EFB25966        3 QREEDKTNTFEKDIMHPRYIALRAKKSPLSLVLKTKKLQVNIKEQVKAG--QEDNKETVVLLSKIH-PFLTSSTHLKWDT 79   giant panda
ELW71477     6686 KEEKETLKIDEKDKMLPKCTDLMAKKSSSLRILNTKELQWHIREQKRKRkmQEDKNELVTGQTNIH-TSLLTLPYLKFDT 6764 Chinese tree ...
XP_005634121 4408 QREEDKANNFEKDIIHPKYIGLKAKKSPLLLILKTKKLQVNMKEQEKVG--QEDSKETIVLLSKIH-PCVTS-THLKWNA 4483 dog
XP_017199109 7124 QVEEDKANISEKSIRHPKYRAVEAKKSPSSHMLEIKKRQV---------------QETVMSLSKRHfYFISSSTHLKLET 7188 rabbit
XP_017168559 4591 YIEEDGVNIFERISMHPTAKHVNRKKSPLSCAPKIKRFKVDLEEQSKKK--HESSRGKVMLLRETC-SVITSSDVFKLDI 4667 house mouse
XP_012362336 3631 KIQKDKASISEKSVMHPKHIAVKAEKSPLSHILKTKELQVNISQQGEKA--QEGEVETVVLLSKTC-PFVTSSAFLELDS 3707 northern whit...
2_pfamImport    2 QVEEDKANVSEERITSPRDTAVTAKKSSVPSTLNTKKLQLSIKEQGRKG--PAGRVERVVTLRKTS-SFATFRAHFKLET 78  
ELW71477     6312 QTEEDAANIFEKSKVFPKDTAVKGQKSPLSYTLQANKLWVNSKEQEEFG--QEVYAHTVVFPSKPR-PFAPSASS-ELYT 6387 Chinese tree ...
XP_017452286 4659 SKEEDGVNTFERITAHPKAKHVNMKKSPLLCVPKIKRFKADLEEQSKKK--HESSREKVMPLRETC-SAITSSDVVNFDT 4735 Norway rat

EFB25966       80 IKDEEGEPGIIRNDAPHLELQESSTSGQTASTESPESHMKKGEQHPQQA-----EkNRVQTEAMSSSMQPWGTDFKAKTS 154  giant panda
ELW71477     6765 TEGEGYVIRITKSPVPPLQFKESPDAGRTAYPETISGQLSNDVKELKEPilekeEkDREKAVNTSSIVGPNDMYLKTKKS 6844 Chinese tree ...
XP_005634121 4484 IKDKEGEPGIIRNDAPYIEPQESLPSMEIASTEVPDSYVKKGEQRPQQE-----ErNRVQTEASSRLLR--DTDLKAKTS 4556 dog
XP_017199109 7189 IKEEDEESELIQCDVLHPVSQELLLSGQMASTESTASQIKSINQNLPQK-----E-DRVQTVATSSLMHPDGVVFKAQTS 7262 rabbit
XP_017168559 4668 --SEEVETETMQSHVPYPVLQKPLPVGQVGSTKTIDNNFTKRKLHPPWE-------EEVQTSAIENLTYLRGPIFMTKIS 4738 house mouse
XP_012362336 3708 IKEEEGEPGIARSFMLHLEIQESLPSGQTAPTKPTESLVKKEKQLLPQK-----E-DRVQAVSMHGLMHPNGAVFKSKTS 3781 northern whit...
2_pfamImport   79 IKEEEEEPEIL-NYGPHLDLQGLLLSGQMASTKSGDSCANIGKHRPRKE-------DRVQRVAMKALTHHRGAVFKEKVS 150 
ELW71477     6388 ITEEADESEPS-SSVPHHDFQEAQPLEKIASAESTNNHVKKGKHEPQEK-------DRAQTVAKTAFMHPDGAVSKEKTL 6459 Chinese tree ...
XP_017452286 4736 --SEEVETETMKSHVPYPVLKISLSVGQIGSTKTIANNFNKRKLPSPWE-----E-EEVQTPDIDNLTSSNSSICMTKIS 4807 Norway rat

EFB25966      155 PPPYafsvt-elgaLDKRKEPQWRMTEKGEQEQQRTRDPDVALTKTPPSTPSP 206  giant panda
ELW71477     6845 PVSH----------ICNSDDFQWKTEKKEEKVQKVEREPNVMPTEASTSISSL 6887 Chinese tree shrew
XP_005634121 4557 SPPHtcsvt-ehgdLNKRKEPQWSMKEE-EEEQQRTEDPDVALTKTPPSTPSP 4607 dog
XP_017199109 7263 APPHvhgft-eqspLSERKEPQWHTEEKVGQKQKGTADPEEAPTKTYLSTSSP 7314 rabbit
XP_017168559 4739 APPCvssvk-khrtLSQK-THQWNSNEKTGQKQERTRHRNVVATKRDASIPll 4789 house mouse
XP_012362336 3782 APPQvfsit-erspLSKRKEPHWGMKERAGQKQDRTGRPHVILTKTHPFMPSL 3833 northern white-cheeked gibbon
2_pfamImport  151 IISHvfssp-epstLSKRKEPEW----EVARKQDRVGGPRVDLRQTYLFMPSP 198 
ELW71477     6460 TPPCvlsit-ehspPSKRKEPQWSTEEQVGQKQDSTGDPDVVVAKTCPSMPSP 6511 Chinese tree shrew
XP_017452286 4808 APSHvssvkkhrteLSKKRTHCWNSNENTGRKQERARRCSEVATKRDASIPll 4860 Norway rat
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