Conserved Protein Domain Family
LPAM_1
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pfam08139: LPAM_1 (this model, PSSM-Id:400449 is obsolete and has been replaced by 429834)
Prokaryotic membrane lipoprotein lipid attachment site
In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognizes a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached.
Links
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Statistics
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PSSM-Id: 400449
Aligned: 36 rows
Threshold Bit Score: 25.2583
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_014247585               1 MRKSrpaLLAAGAVAVLSGCS 21  Azospirillum lipoferum
WP_045965789               1 MKQT---IFVATLLLILSGCQ 18  Pseudoalteromonas
PRJNA258352:R70331_26650   1 MKRL---ILLLVLLFTLSACN 18  Paenibacillus sp. FSL R7-0331
WP_067428350               1 MKRT---IVPLTMMLALSACS 18  Erwinia gerundensis
WP_036655093               1 MRRF---ILFFLIVVMLSACN 18  Paenibacillus wynnii
WP_008842564               1 MKKY---ILALLILVVVSACS 18  Aliiglaciecola lipolytica
EGV05401                   1 MKKI---LCAIVATFYLSACT 18  Haemophilus pittmaniae HK 85
jgi:Glov_3157              1 MKRI---LLVLGIVVLLTGCN 18  Geobacter lovleyi SZ
CCE25557                   1 MKRM---TSLFGILLALTGCS 18  Methylomicrobium alcaliphilum 20Z
EGU34767                   1 MKKY---LLVICTLFALSGCA 18  Vibrio sp. N418
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