Conserved Protein Domain Family
KOG4150

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KOG4150: KOG4150 (this model, PSSM-Id:39353 is obsolete and has been replaced by 232081)
KOG4150, Predicted ATP-dependent RNA helicase [RNA processing and modification]
Statistics
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PSSM-Id: 39353
Aligned: 3 rows
Threshold Bit Score: -1
Created: 21-Jun-2003
Updated: 21-Jun-2003
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6320497     1 MEEGPIKKKLKSAGQGSGKTDAFRNFEQFFFRLNTLYTFLICRKHVVPTFKTLCGPIETALKRTVTKEDLAMVMALMPRE 80   baker's yeast
15241530    1 MENERRSGGGDSVPISVRSINGESTTVQVSSDGTIRDLKKALKSCFPPASSSSNFHLYIKGEKLKLDTRVAAITINDGDI 80   thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497    81 CVFKYIDENQIYTETKIFDFNNGGFQQKENDIFELKDVDDQNQTQKSTQLLIFEFIDGTMQRSWSASDRFSQIKIptYTT 160  baker's yeast
15241530   81 LGLFPFKKKELRQTPKPDLSKPSSLSSRTSTMKDENAKRAEDHCVGEKRKRDEEACPYGFFNDDLESECKDAFKG--QNT 158  thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497   161 EEMKKMISKREALFKSRLREFILEKEKAN---LDPFSELTNLAQKYIPRERDYEDPIEAMMKAKQESNEMSIPNYSNNSV 237  baker's yeast
15241530  159 EKLAEVLKSRNCLTSPGSTKCLMSWDSSSslcSCPDWESLSRLAMSGVRVRIQDVKNLSVICPKVITDDYEAVNYENAIV 238  thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497   238 ITTIPQMIEklKSTEFYASQIKHCFTIPSRTAKYKGLCFELAPEVYQGMEHENFYSHQAD-AINSLHQGENVIITTSTSS 316  baker's yeast
15241530  239 IADYLEMDE--KSGRKKIPLAKLFSAMKKREASFKSDFWESIRSLLNKNTGESGIAISLEgLLKFASEGRADGGNEARQA 316  thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497   317 GKSLIYQLAAIDLLLKDPESTFMYIFPTKALAQD--QKRAFKVILSKIPELKNAVVDTYDGDTEPEERAYIRKNARVIFT 394  baker's yeast
15241530  317 GKGTCPTSGSRKFQTLCHATNSLLPSEMVEHLRNgiGSKGQVVHVEVIKARKSAYVEMSDKLSETTKSALKRIGLNTLYS 396  thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497   395 NPDMIHTSILP-------------NHANWRHFLYHLKLVVVDELHIYKGLFGSHVALVMRRLLRLCHCFYENSGLQFISC 461  baker's yeast
15241530  397 HQAEAISAALAgknvavatmtssgKSLCYNVPVFEELCKDTNSCALYLFPTKALAQDQLRALSDLIKGFEASINMGVYDG 476  thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497   462 SATLKSPVQHMK----DMFGINEVTLIHEDGSPTGAKHLVVWNPPILPQHERKRENFIR--------------------- 516  baker's yeast
15241530  477 DTPYKDRTRLRSnarlELANLSELELVTIDGSPSSEKLFVLWNPSAPPTSKSEKSSKVVssseaaadkpsgaavdtlsgp 556  thale cress
19115360      --------------------------------------------------------------------------------      fission yeast
6320497   517 --ESAKILVQLILNNVRTIAFCYVRRVCELLMKEVRNIFIETGReDLVTEVMSYRGGYSASDRRKIEREMFHGNLKAVIS 594  baker's yeast
15241530  557 asEVSHLFAEMVQHGLRCIAFCPSRKLCELVLCLTREILAETAP-HLVEAITSYRGGYIAEDRRKIESDLFGGKLCGIAA 635  thale cress
19115360    1 ---------------------------------------------------------------------------YGIIA 5    fission yeast
6320497   595 TNALELGIDIGGLDAVLMCGFPLSMANFHQQSGRAGRRNNDSLTLVVASDSPVDQHYVAHPESLLEVNNFEsyqdLVLDF 674  baker's yeast
15241530  636 TNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRQKPSLAVYVAFLGPLDQYYMSFPDKLFGSPIEC----CHIDS 711  thale cress
19115360    6 TNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRRNKSSLAVYIVETFPVDQFYLKHPILIHTQPNAE----LTLDL 81   fission yeast
6320497   675 NNILILEGHIQCAAFELPINFERDKQYFTES------HLRKICVERLHHNQDGYHASNRFLPWPSKCVSLRGGEEDQFAV 748  baker's yeast
15241530  712 QNKHVLMQHLACAALEHPLSLQYDQQHFGSGlsdplaELRNKGFLSFDPSRDSSSRIWNYIGREKNPARIVSIRAIETVR 791  thale cress
19115360   82 TNEVLLASHLQCAAYELPINIRSDEKFFGN-------QIQDICEANLEMVEESYRPHPKYLPFPASQVRIRSVSEDMFTL 154  fission yeast
6320497   749 VDITNGRN-IIIEEIEASRTSFTLYDGGIFIHQGYPYLVKEFNPDERYAKVQRVDVDWVTNQRDFTDVDPQEIELIRSLR 827  baker's yeast
15241530  792 YRVMEKKSkDVLDEIEESKAFFHVYEGAIYMNQGRNYLVTSLDIKEKVALCELVNVDYYTRTRDYTDIKVTGGDTAYPVK 871  thale cress
19115360  155 VDVTNDKN-VILELLEPFRVALTAYEGAVYVYQGKTFIIRLLNINKRIITAHQVDVEWSTLQRDFTDVDPVRSLMKKTMH 233  fission yeast
6320497   828 NSD-VPVYFGKIKTTIIVFGFFKVDKYK-RIIDAIETHNPPVIINSKGLWIDMPKYALEICQKKQLNVAGAIHGAQHAIM 905  baker's yeast
15241530  872 APKkPTPQTHACRVTTKWFGFLRIRRRNnEVIDDVELSLPSYTYQSQAVWIQVPMSVKLAVETANLPFRAGLHAACHALV 951  thale cress
19115360  234 GS--TNIYFGAVKATLHVFGYFKVNKQK-DILDVVDITDHPVEIDSRGFWIDVPWHIIEVLSLKKINGAASIHAAQHALL 310  fission yeast
6320497   906 GMLPRFIVAGVDEIQTECKAPEKEFAERQTKRKRPARLIFYD--SKGGKYGSGLCVKAFEHIDDIIESSLRRIEECPCS- 982  baker's yeast
15241530  952 NVVPTRVTCNYSDIAPECPNPQE-------QRYFPARILVYDrhPGGTGISAKICPLFFELLKDAR-DLLRSCEKCPPEt 1023 thale cress
19115360  311 SLMPIFISNSGNDIRTECKAGEKEYKEAKSERRRPSRLIFYD--NCGDSSGAGLCNKAYEHTDELITMAIERIESCDCKv 388  fission yeast
6320497   983 -DGCPDCVAASFCKE---NSLVLSKPGAQVVLHCILGHSEDsfIDLIKDGPEPNMpEIKVETVIPVS 1045 baker's yeast
15241530 1024 --GCPKCAQTFGCRG---YNELLHKKAAIMIMQVTKKNTK--------------------------- 1058 thale cress
19115360  389 rEGCPGCITSSKFEGgvcSGEVLDKVGALILLKMLLCQHVN--LDIYADGPEIDS-YHALRTLIPSC 452  fission yeast
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