Conserved Protein Domain Family
SCAMP

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pfam04144: SCAMP (this model, PSSM-Id:367838 is obsolete and has been replaced by 461193)
SCAMP family
In vertebrates, secretory carrier membrane proteins (SCAMPs) 1-3 constitute a family of putative membrane-trafficking proteins composed of cytoplasmic N-terminal sequences with NPF repeats, four central transmembrane regions (TMRs), and a cytoplasmic tail. SCAMPs probably function in endocytosis by recruiting EH-domain proteins to the N-terminal NPF repeats but may have additional functions mediated by their other sequences.
Statistics
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PSSM-Id: 367838
Aligned: 135 rows
Threshold Bit Score: 73.719
Created: 5-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_004345615 120 PNFPF----FYPIVYISIAHDMPEQtMRNQIRLALTLWFFMMAAFIWGF-LSVMIPFFDGDALnksagwdnDtaAF-FLA 193 Capsaspora owcz...
Q38E22        31 PNFPPqflcIKPLVYHNIKEQVPVP-SQRFMYTLAFMYFALIAIIIYNI-SIALLSFVFG-----------GsgMHfGLS 97  Trypanosoma brucei
CAM43692      38 PNFPPecccVKPIIYHNIREQVPVP-QQRFMYILAGLYITLMVLIVYNI-VAALVAFILG-----------GnvTHfGLS 104 Leishmania braz...
CAM72390      38 PNFPPecccVKPVIYHNIREQVPVT-QQRFMYILAGLYVTLMALIIYNI-VAALVAFALG-----------GsaLHfGLS 104 Leishmania infa...
Q387I0       203 ANFPPkflcIKPLVNHTIG-MVPEP-RRKYVKFNYVIWMVNCVLLVANA-SVAITVAFSPYENefegpkasNkaQAtALS 279 Trypanosoma brucei
CAM39054      46 PNFPRkflcIHPLVYHSIS-VVPEH-RQLFVKMAFWDWVAVCILLVANC-VVAIGVTSAPIRSnvavnhdiNkvLNgVLA 122 Leishmania braz...
Q4QA24       164 PNFPPkflcIHPLVHHSIS-TVPEH-RQLFVKMAFWDWVAVCILLLANC-GIAIGVSSAPVRSnivvhddiNkaQNgVLA 240 Leishmania major
EAY14139     102 RNFPM----ILKIYKYYPEEELPNDaVKMVQLLKWTMYT-FTFIMFLNAlISFLSLTPCASEEi------kSpaASiVFA 170 Trichomonas vag...
EAY17536      80 PNWPK----FYPLVHFDIN-EVDAS-YRSYVNETFFSWVCMLVTYFLNF-IASLTLLSAGDAVns-----pG--TKiSLS 145 Trichomonas vag...
EAY01800      39 PNWPV----CCPFVYHDISGEIPIK-NTAACKVAYILQYVWALTLIVNM----LAAFGSGSMAny----svA--KYiVFS 103 Trichomonas vag...
XP_004345615 194 LIWMLAGVPLSFY-FWFFRLYTLHRdlgaDKTpgVSYFFWFFHGLVNFLWcciyaIGPPqIPGMAGFVVAVnifnaseDS 272 Capsaspora owcz...
Q38E22        98 FVY-LVGIPGAFV-VWYYNVYSSVVn---EAN--SRRWLGYVGLALGVIFdiwmaVGVS-GLGGCGWIMALg------EK 163 Trypanosoma brucei
CAM43692     105 FLF-LLGIPGAWI-VWYYNVYCAIVy---SSR--PRQKLALLGLFLGVAFdvwmaVGVT-GFGGCGWLYAFs-----lMR 171 Leishmania braz...
CAM72390     105 FVY-LLGLPGAWI-SWYYNVYCAIVy---ASR--SRQLIALLGLLVGVVFdvwmtIGIT-GFGGCGWIYALs-----lTR 171 Leishmania infa...
Q387I0       280 IAY-LLGVPLSFF-VWHWPIYKACIt---GLA--TRHLVSLCGLLVALAFaifmlVGLP-DTGACGAILAMev---yeGK 348 Trypanosoma brucei
CAM39054     123 ILY-LIGIPLSFL-LWYWRIYRGCSt---GRP--PQHILALCGLFIALAQaifalVGSE-SYGVCGIILAKwi---qeTR 191 Leishmania braz...
Q4QA24       241 ILH-LTGIPLSFL-IWYWRIYQGCSt---GRP--PQHILALSGLLVALAHaifalVGPK-NYGLSGIALAKwi---qaTR 309 Leishmania major
EAY14139     171 CVY-FAFGPLVFTeICLMLLYDSLKn---KKG--ARYFFSIITIFLYLAFciyviVGLS-DYGSFGYIISInll--raPK 241 Trichomonas vag...
EAY17536     146 ALYFFFICPIALD-LDALSVYRALKt--aPST--LAFTKIFICLALTLIFefvlaVGAQ-SSGSVGLITTIdl---faSK 216 Trichomonas vag...
EAY01800     104 IIYTILGIPLAFR-VNYMKYYEQCKk--eDLS--L---SWFLLEIIFFGLnvvgaVGLP-NSGLCGVLYAIda---fsKG 171 Trichomonas vag...
XP_004345615 273 NKLYATFIVISGVIWTVCAGFSLLFLLWIVR 303 Capsaspora owczarzaki ATCC 30864
Q38E22       164 NFLVFILAIISASLWTAHCLMLLLLGIKYFR 194 Trypanosoma brucei
CAM43692     172 TVTSFVMILISAILWSLHGFALCVVMLRYWR 202 Leishmania braziliensis MHOM/BR/75/M2904
CAM72390     172 NVAPFVLVLISAILWPLHGFALCVMLLRYWR 202 Leishmania infantum JPCM5
Q387I0       349 SNYLLIPLGVVISLWCFETAYFFYCMVVQWK 379 Trypanosoma brucei
CAM39054     192 ATGVVVPVAVIAVLWAVQAVFTCYMITKMFI 222 Leishmania braziliensis MHOM/BR/75/M2904
Q4QA24       310 ESGVAAPVAIMAVLWAAQAVFTGFMIFKVFV 340 Leishmania major
EAY14139     242 NKWVGIVALIFSILGTLHCVFLGWVWWMIVV 272 Trichomonas vaginalis G3
EAY17536     217 CVGTGIFGIIVTICFAVTIFFTTKLLIRLWK 247 Trichomonas vaginalis G3
EAY01800     172 NGYIKIFGIISACAWILSSLGQGFLGSRSFL 202 Trichomonas vaginalis G3
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