Conserved Protein Domain Family
Myosin-VI_CBD

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pfam16521: Myosin-VI_CBD (this model, PSSM-Id:339762 is obsolete and has been replaced by 465157)
Myosin VI cargo binding domain
Myosin-VI_CBD is a C-terminal family that allows unconventional myosin-VI to recognize and select its binding cargoes. Several adaptor proteins have been reported to interact specifically with the CBD, thus defining the specific subcellular functions of myosin VI. The crystal structure determination of the myosin VI CBD/Dab2 (an endocytic adaptor protein Disabled-2 that is a cargo) complex shows that the Myosin-VI_CBD forms a cargo-induced dimer, suggesting that the motor undergoes monomer-to-dimer conversion that is dependent upon cargo binding. In the absence of cargo myosin VI exists as a stable monomer. This cargo binding-mediated monomer-to-dimer conversion mechanism adopted by myosin VI may be shared by other unconventional myosins, such as myosin VII and myosin X.
Statistics
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PSSM-Id: 339762
Aligned: 23 rows
Threshold Bit Score: 145.098
Created: 13-Apr-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q17DE9       1149 HRYFRIPFVRPSNNQEDN--NKRGWWYAHFDGQYVARQMELHADKPPILLVAGVDDMQMCELSLEETGLTRKRGAEILEH 1226 yellow fever ...
CAP32327     1237 QRYFKYIFDAGAQLDFSFs-GKTGMWYAHFSGEHIHRQITIRPSQMPQLMIAGRDDLQMCELTLRETGLEHKPGAEITEE 1315 Caenorhabditi...
XP_003090251  335 QRYFKYAFDVGSPl------EKTGLWFAHFSGQHVQRQLTLRPSQRPQLMIAGRDDLQMCELTLSETGLEWKSGAEISEA 408  Caenorhabditi...
NP_001023549 1105 QRYFKCEFKENNQK------DQVSMWFVHFSGQQIQRQLTFTSSRPPQTLIAGRDDAQMCTLALQETLLVGKRGAEISED 1178 Caenorhabditi...
XP_002112451 1122 QRFFRVPFNTSGPVP-----RPCGWWFAHFDGDWVVRQLELHSGRPPVLLLAGIDDMNMCELRLQETGLATRPGAEILPE 1196 Trichoplax ad...
AAF72178      125 QRFFRVPFSVTGSTAQGQm-PERGWWYAHFDGQWIARQMEVHPTKVPVLLVAGKDDENMCEMSLEETGLTRRPNAEIVER 203  purple sea ur...
CBY09893     1140 QRFFKVPFNPRQGG------AKLGWWYAHFDGSYVKRQMELHPNKEPILLIRGRHDLEMCELSLEKTGLTSRKGAEIFPI 1213 Oikopleura di...
NP_001293431  268 QRYFKVSFATDNKKKNGG--SQSGMWYAHFNGQYIRRQLTIRPSQKPQLLVAGKDDLQMCELPLEQTGLLRKKGAEISSN 345  Caenorhabditi...
XP_009017280 1166 QRYFRIPFKRSNEPNGPSy-PISGWWLAHFDGNWVARQMELHPGKAPVLLVAGADDIRMCELSLTQSGLVRRQGAEVTEA 1244 Helobdella ro...
XP_001628100 1124 QRFFRVPFVRPKDKYRESeyRKQGWWFAHFDGQWVARQMEFHPGKDPLLLVSGEDDLDMCELSLDETGLTRRQGAEIAQQ 1203 starlet sea a...
Q17DE9       1227 EFNREWERNGG 1237 yellow fever mosquito
CAP32327     1316 EFENQWKMAGG 1326 Caenorhabditis briggsae
XP_003090251  409 EFESQWKQAGG 419  Caenorhabditis remanei
NP_001023549 1179 EFESHWKlgcl 1189 Caenorhabditis elegans
XP_002112451 1197 AFEEIWHKCGG 1207 Trichoplax adhaerens
AAF72178      204 EFEEPWKRSGG 214  purple sea urchin
CBY09893     1214 AFDEMWERCGG 1224 Oikopleura dioica
NP_001293431  346 DFETMWYHYGG 356  Caenorhabditis elegans
XP_009017280 1245 VFDEVWS---- 1251 Helobdella robusta
XP_001628100 1204 EFEVLWHQFGG 1214 starlet sea anemone
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